RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 AESQ08117 197 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 HERPUD1Q15011 391 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 HMGN3Q15651 99 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 MSMO1Q15800 293 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 IGFBP7Q16270 282 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 SP6Q3SY56 376 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 FBXL19-AS1Q494R0 122 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 LRRC37A5PQ49AS3 106 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 PHLDA2Q53GA4 152 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 CLLU1Q5K131 121 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 C10orf25Q5T742 122 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 GPR157Q5UAW9 335 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 PRAMEF6Q5VXH4 476 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 GGNBP1Q5YKI7 109 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 EIF5AL1Q6IS14 154 aaKnown RBP3.7□□□□□ -1.82
SRP54-212ENST00000556992 ZNF826PQ6ZT77 177 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 TBC1D26Q86UD7 250 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 MOGAT3Q86VF5 341 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 ZNF695Q8IW36 515 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 OR8H3Q8N146 312 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 OR10V1Q8NGI7 309 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 PLPPR1Q8TBJ4 325 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 GLYATL2Q8WU03 294 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 FAM216AQ8WUB2 273 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 SECTM1Q8WVN6 248 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 IL1F10Q8WWZ1 152 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 RNASE6Q93091 150 aaKnown RBP3.7□□□□□ -1.82
SRP54-212ENST00000556992 MSI2Q96DH6 328 aaKnown RBP3.7□□□□□ -1.82
SRP54-212ENST00000556992 PHYHIPLQ96FC7 376 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 CYYR1Q96J86 154 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 OR10C1Q96KK4 312 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 SNX22Q96L94 193 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 WFIKKN1Q96NZ8 548 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 OR2V2Q96R30 315 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 SPIN2AQ99865 258 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 ARPC5LQ9BPX5 153 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 SPIN2BQ9BPZ2 258 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 MRPL37Q9BZE1 423 aaKnown RBP3.7□□□□□ -1.82
SRP54-212ENST00000556992 PLEKHF2Q9H8W4 249 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 PLEKHA2Q9HB19 425 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 CCL28Q9NRJ3 127 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 RDH8Q9NYR8 311 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 COQ3Q9NZJ6 369 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 DUX4Q9UBX2 424 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 KIF25Q9UIL4 384 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 SH3BGRL2Q9UJC5 107 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 RBM7Q9Y580 266 aaKnown RBP3.7□□□□□ -1.82
SRP54-212ENST00000556992 UTP20O75691 2785 aaKnown RBP3.7□□□□□ -1.82
SRP54-212ENST00000556992 CNTRLQ7Z7A1 2325 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 KIF26BQ2KJY2 2108 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 CPAMD8Q8IZJ3 1885 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 ITPR2Q14571 2701 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 A0A1B0GU03 582 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 LINC00862A6NCI5 91 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 SRRM5B3KS81 715 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 C12orf77C9JDV5 145 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 E5RGE8 158 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 F5H0A9 414 aaPredicted RBP3.69□□□□□ -1.82
SRP54-212ENST00000556992 H0Y980 276 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 K7EPK0 472 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 K7N7A8 449 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 ABCD4O14678 606 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 HSD17B6O14756 317 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 ST8SIA3O43173 380 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 BCL2L11O43521 198 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 ZNF737O75373 536 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 IGHV1-46P01743 117 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 CD55P08174 381 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 OR8U9P0C7N5 309 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 PSG1P11464 419 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 PSG2P11465 335 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 SLC25A6P12236 298 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 PLA2G2AP14555 144 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 MUC1P15941 1255 aaPredicted RBP3.69□□□□□ -1.82
SRP54-212ENST00000556992 PVALBP20472 110 aaPredicted RBP3.69□□□□□ -1.82
SRP54-212ENST00000556992 VDAC1P21796 283 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 F2RP25116 425 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 UCP1P25874 307 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 GABRA2P47869 451 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 OR3A1P47881 315 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 LOXL3P58215 753 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 UBA52P62987 128 aaKnown RBP3.69□□□□□ -1.82
SRP54-212ENST00000556992 HTD2P86397 168 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 BSPH1Q075Z2 132 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 EXOSC2Q13868 293 aaKnown RBP3.69□□□□□ -1.82
SRP54-212ENST00000556992 GNMTQ14749 295 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 ODF1Q14990 250 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 ATXN7L3Q14CW9 347 aaPredicted RBP3.69□□□□□ -1.82
SRP54-212ENST00000556992 ADIPOQQ15848 244 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 PRR30Q53SZ7 412 aaPredicted RBP3.69□□□□□ -1.82
SRP54-212ENST00000556992 KRBOX4Q5JUW0 171 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 NCMAPQ5T1S8 102 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 TMEM268Q5VZI3 342 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 THOC7Q6I9Y2 204 aaKnown RBP3.69□□□□□ -1.82
SRP54-212ENST00000556992 ZNF818PQ6ZRF7 136 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 LYZL2Q7Z4W2 148 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 PDZD9Q8IXQ8 264 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 SELENOHQ8IZQ5 122 aaKnown RBP3.69□□□□□ -1.82
SRP54-212ENST00000556992 ZNF561Q8N587 486 aa3.69□□□□□ -1.82
SRP54-212ENST00000556992 FAM71E2Q8N5Q1 922 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms