RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 OR10R2Q8NGX6 335 aa17.7■□□□□ 0.42
TMEM260-214ENST00000556975 C4orf3Q8WVX3 66 aa17.7■□□□□ 0.42
TMEM260-214ENST00000556975 DUX3Q96PT4 197 aa17.7■□□□□ 0.42
TMEM260-214ENST00000556975 WASHC3Q9Y3C0 194 aa17.7■□□□□ 0.42
TMEM260-214ENST00000556975 WSB1Q9Y6I7 421 aa17.7■□□□□ 0.42
TMEM260-214ENST00000556975 G3V318 75 aa17.69■□□□□ 0.42
TMEM260-214ENST00000556975 RAB27BO00194 218 aa17.69■□□□□ 0.42
TMEM260-214ENST00000556975 RRHO14718 337 aa17.69■□□□□ 0.42
TMEM260-214ENST00000556975 CD3GP09693 182 aa17.69■□□□□ 0.42
TMEM260-214ENST00000556975 HOXD3P31249 432 aaPredicted RBP17.69■□□□□ 0.42
TMEM260-214ENST00000556975 SERPINB10P48595 397 aa17.69■□□□□ 0.42
TMEM260-214ENST00000556975 CRIP2P52943 208 aaPredicted RBP17.69■□□□□ 0.42
TMEM260-214ENST00000556975 KIAA0141Q14154 515 aaPredicted RBP17.69■□□□□ 0.42
TMEM260-214ENST00000556975 ZNF660Q6AZW8 331 aaPredicted RBP17.69■□□□□ 0.42
TMEM260-214ENST00000556975 GLDNQ6ZMI3 551 aaPredicted RBP17.69■□□□□ 0.42
TMEM260-214ENST00000556975 SPARTQ8N0X7 666 aa17.69■□□□□ 0.42
TMEM260-214ENST00000556975 RDH8Q9NYR8 311 aa17.69■□□□□ 0.42
TMEM260-214ENST00000556975 TRAV41A0A0B4J266 112 aa17.68■□□□□ 0.42
TMEM260-214ENST00000556975 MFNGO00587 321 aa17.68■□□□□ 0.42
TMEM260-214ENST00000556975 DIRAS3O95661 229 aa17.68■□□□□ 0.42
TMEM260-214ENST00000556975 GSTP1P09211 210 aaKnown RBP17.68■□□□□ 0.42
TMEM260-214ENST00000556975 GADD45AP24522 165 aa17.68■□□□□ 0.42
TMEM260-214ENST00000556975 FGF9P31371 208 aaPredicted RBP17.68■□□□□ 0.42
TMEM260-214ENST00000556975 MRPS15P82914 257 aaKnown RBP17.68■□□□□ 0.42
TMEM260-214ENST00000556975 DEFB136Q30KP8 78 aa17.68■□□□□ 0.42
TMEM260-214ENST00000556975 C22orf42Q6IC83 251 aa17.68■□□□□ 0.42
TMEM260-214ENST00000556975 MINDY2Q8NBR6 621 aa17.68■□□□□ 0.42
TMEM260-214ENST00000556975 UBE2E2Q96LR5 201 aa17.68■□□□□ 0.42
TMEM260-214ENST00000556975 KLK15Q9H2R5 256 aa17.68■□□□□ 0.42
TMEM260-214ENST00000556975 Q9H521 79 aa17.68■□□□□ 0.42
TMEM260-214ENST00000556975 PARP11Q9NR21 331 aa17.68■□□□□ 0.42
TMEM260-214ENST00000556975 ZNF221Q9UK13 617 aa17.68■□□□□ 0.42
TMEM260-214ENST00000556975 RNF150Q9ULK6 438 aa17.68■□□□□ 0.42
TMEM260-214ENST00000556975 GAB2Q9UQC2 676 aa17.68■□□□□ 0.42
TMEM260-214ENST00000556975 WI2-2373I1.2A0A1W2PRP0 233 aa17.67■□□□□ 0.42
TMEM260-214ENST00000556975 METTL21EPA6NDL7 271 aa17.67■□□□□ 0.42
TMEM260-214ENST00000556975 H7C2Y5 167 aa17.67■□□□□ 0.42
TMEM260-214ENST00000556975 FABP7O15540 132 aa17.67■□□□□ 0.42
TMEM260-214ENST00000556975 FCGR3AP08637 254 aa17.67■□□□□ 0.42
TMEM260-214ENST00000556975 FHL3Q13643 280 aa17.67■□□□□ 0.42
TMEM260-214ENST00000556975 C19orf54Q5BKX5 351 aa17.67■□□□□ 0.42
TMEM260-214ENST00000556975 TMEM65Q6PI78 240 aa17.67■□□□□ 0.42
TMEM260-214ENST00000556975 NR2C2APQ86WQ0 139 aa17.67■□□□□ 0.42
TMEM260-214ENST00000556975 ZNF491Q8N8L2 437 aa17.67■□□□□ 0.42
TMEM260-214ENST00000556975 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.67■□□□□ 0.42
TMEM260-214ENST00000556975 FCGR1BQ92637 280 aa17.67■□□□□ 0.42
TMEM260-214ENST00000556975 CABLES2Q9BTV7 478 aa17.67■□□□□ 0.42
TMEM260-214ENST00000556975 FBXL15Q9H469 300 aa17.67■□□□□ 0.42
TMEM260-214ENST00000556975 ZMAT5Q9UDW3 170 aaKnown RBP17.67■□□□□ 0.42
TMEM260-214ENST00000556975 HIST1H1DP16402 221 aaKnown RBP17.66■□□□□ 0.42
TMEM260-214ENST00000556975 GNB3P16520 340 aa17.66■□□□□ 0.42
TMEM260-214ENST00000556975 CX3CL1P78423 397 aa17.66■□□□□ 0.42
TMEM260-214ENST00000556975 RUNX1Q01196 453 aa17.66■□□□□ 0.42
TMEM260-214ENST00000556975 SRSF7Q16629 238 aaKnown RBP eCLIP17.66■□□□□ 0.42
TMEM260-214ENST00000556975 OR5M8Q8NGP6 311 aa17.66■□□□□ 0.42
TMEM260-214ENST00000556975 TRBV6-7A0A0A0MS04 114 aa17.65■□□□□ 0.42
TMEM260-214ENST00000556975 TFAP2AP05549 437 aa17.65■□□□□ 0.42
TMEM260-214ENST00000556975 GSTT2P0CG29 244 aa17.65■□□□□ 0.42
TMEM260-214ENST00000556975 GSTT2BP0CG30 244 aa17.65■□□□□ 0.42
TMEM260-214ENST00000556975 RAB9AP51151 201 aa17.65■□□□□ 0.42
TMEM260-214ENST00000556975 NDPQ00604 133 aa17.65■□□□□ 0.42
TMEM260-214ENST00000556975 Q6ZS49 121 aa17.65■□□□□ 0.42
TMEM260-214ENST00000556975 TCTEX1D1Q8N7M0 179 aa17.65■□□□□ 0.42
TMEM260-214ENST00000556975 ZNF383Q8NA42 475 aa17.65■□□□□ 0.42
TMEM260-214ENST00000556975 DRAXINQ8NBI3 349 aaPredicted RBP17.65■□□□□ 0.42
TMEM260-214ENST00000556975 CENPOQ9BU64 300 aa17.65■□□□□ 0.42
TMEM260-214ENST00000556975 TXNL4BQ9NX01 149 aaKnown RBP17.65■□□□□ 0.42
TMEM260-214ENST00000556975 VSIG4Q9Y279 399 aa17.65■□□□□ 0.42
TMEM260-214ENST00000556975 FBXO7Q9Y3I1 522 aa17.65■□□□□ 0.42
TMEM260-214ENST00000556975 NUBP2Q9Y5Y2 271 aa17.65■□□□□ 0.42
TMEM260-214ENST00000556975 A0A0B4J203 849 aa17.64■□□□□ 0.41
TMEM260-214ENST00000556975 I3L521 148 aa17.64■□□□□ 0.41
TMEM260-214ENST00000556975 FCN1O00602 326 aa17.64■□□□□ 0.41
TMEM260-214ENST00000556975 EGR2P11161 476 aaPredicted RBP17.64■□□□□ 0.41
TMEM260-214ENST00000556975 PSMB9P28065 219 aa17.64■□□□□ 0.41
TMEM260-214ENST00000556975 RAB25P57735 213 aa17.64■□□□□ 0.41
TMEM260-214ENST00000556975 ARL6IP1Q15041 203 aa17.64■□□□□ 0.41
TMEM260-214ENST00000556975 PSG5Q15238 335 aa17.64■□□□□ 0.41
TMEM260-214ENST00000556975 IGSF11Q5DX21 431 aa17.64■□□□□ 0.41
TMEM260-214ENST00000556975 ZNF562Q6V9R5 426 aa17.64■□□□□ 0.41
TMEM260-214ENST00000556975 TPRA1Q86W33 373 aa17.64■□□□□ 0.41
TMEM260-214ENST00000556975 PDPNQ86YL7 162 aa17.64■□□□□ 0.41
TMEM260-214ENST00000556975 OR11H1Q8NG94 326 aa17.64■□□□□ 0.41
TMEM260-214ENST00000556975 OR10J5Q8NHC4 309 aa17.64■□□□□ 0.41
TMEM260-214ENST00000556975 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.64■□□□□ 0.41
TMEM260-214ENST00000556975 STUB1Q9UNE7 303 aa17.64■□□□□ 0.41
TMEM260-214ENST00000556975 NOTOA8MTQ0 251 aa17.63■□□□□ 0.41
TMEM260-214ENST00000556975 SPDEFO95238 335 aa17.63■□□□□ 0.41
TMEM260-214ENST00000556975 IGKV1-16P04430 117 aa17.63■□□□□ 0.41
TMEM260-214ENST00000556975 LINC00205P59089 165 aa17.63■□□□□ 0.41
TMEM260-214ENST00000556975 TMEM267Q0VDI3 215 aaPredicted RBP17.63■□□□□ 0.41
TMEM260-214ENST00000556975 PLGLAQ15195 96 aa17.63■□□□□ 0.41
TMEM260-214ENST00000556975 TSNAXQ99598 290 aaKnown RBP17.63■□□□□ 0.41
TMEM260-214ENST00000556975 GNB4Q9HAV0 340 aa17.63■□□□□ 0.41
TMEM260-214ENST00000556975 BET1O15155 118 aa17.62■□□□□ 0.41
TMEM260-214ENST00000556975 APOA2P02652 100 aa17.62■□□□□ 0.41
TMEM260-214ENST00000556975 DEFB121Q5J5C9 76 aa17.62■□□□□ 0.41
TMEM260-214ENST00000556975 ATG5Q9H1Y0 275 aa17.62■□□□□ 0.41
TMEM260-214ENST00000556975 METTL1Q9UBP6 276 aaKnown RBP17.62■□□□□ 0.41
TMEM260-214ENST00000556975 ZNF230Q9UIE0 474 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms