RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 TET2Q6N021 2002 aaPredicted RBP8.47□□□□□ -1.05
LINC00239-201ENST00000556973 ANK2Q01484 3957 aa8.47□□□□□ -1.05
LINC00239-201ENST00000556973 H0YJW9 148 aa8.47□□□□□ -1.05
LINC00239-201ENST00000556973 FBXO24O75426 580 aa8.47□□□□□ -1.05
LINC00239-201ENST00000556973 IGHG2P01859 326 aa8.47□□□□□ -1.05
LINC00239-201ENST00000556973 SOX6P35712 828 aa8.47□□□□□ -1.05
LINC00239-201ENST00000556973 TAS2R20P59543 309 aa8.47□□□□□ -1.05
LINC00239-201ENST00000556973 ARPC4P59998 168 aa8.47□□□□□ -1.05
LINC00239-201ENST00000556973 ACTBP60709 375 aa8.47□□□□□ -1.05
LINC00239-201ENST00000556973 TMEM95Q3KNT9 176 aa8.47□□□□□ -1.05
LINC00239-201ENST00000556973 GLDNQ6ZMI3 551 aaPredicted RBP8.47□□□□□ -1.05
LINC00239-201ENST00000556973 FAM71E2Q8N5Q1 922 aa8.47□□□□□ -1.05
LINC00239-201ENST00000556973 BEST4Q8NFU0 473 aa8.47□□□□□ -1.05
LINC00239-201ENST00000556973 NPBQ8NG41 125 aa8.47□□□□□ -1.05
LINC00239-201ENST00000556973 OR5AU1Q8NGC0 362 aa8.47□□□□□ -1.05
LINC00239-201ENST00000556973 RAB2BQ8WUD1 216 aa8.47□□□□□ -1.05
LINC00239-201ENST00000556973 OR2D2Q9H210 308 aa8.47□□□□□ -1.05
LINC00239-201ENST00000556973 SDHAF2Q9NX18 166 aa8.47□□□□□ -1.05
LINC00239-201ENST00000556973 SCOCQ9UIL1 159 aa8.47□□□□□ -1.05
LINC00239-201ENST00000556973 WASHC3Q9Y3C0 194 aa8.47□□□□□ -1.05
LINC00239-201ENST00000556973 OR2W1Q9Y3N9 320 aa8.47□□□□□ -1.05
LINC00239-201ENST00000556973 H7C2Y5 167 aa8.46□□□□□ -1.06
LINC00239-201ENST00000556973 M0R1X1 148 aa8.46□□□□□ -1.06
LINC00239-201ENST00000556973 HPGDSO60760 199 aa8.46□□□□□ -1.06
LINC00239-201ENST00000556973 RBBP9O75884 186 aa8.46□□□□□ -1.06
LINC00239-201ENST00000556973 SLC22A5O76082 557 aa8.46□□□□□ -1.06
LINC00239-201ENST00000556973 HLA-DQB1P01920 261 aa8.46□□□□□ -1.06
LINC00239-201ENST00000556973 EIF4EP06730 217 aaKnown RBP8.46□□□□□ -1.06
LINC00239-201ENST00000556973 CD28P10747 220 aa8.46□□□□□ -1.06
LINC00239-201ENST00000556973 PTHLHP12272 177 aa8.46□□□□□ -1.06
LINC00239-201ENST00000556973 PRSS3P35030 304 aa8.46□□□□□ -1.06
LINC00239-201ENST00000556973 LUMP51884 338 aaPredicted RBP8.46□□□□□ -1.06
LINC00239-201ENST00000556973 TAGLNQ01995 201 aaKnown RBP8.46□□□□□ -1.06
LINC00239-201ENST00000556973 MMDQ15546 238 aa8.46□□□□□ -1.06
LINC00239-201ENST00000556973 FAM131AQ6UXB0 335 aa8.46□□□□□ -1.06
LINC00239-201ENST00000556973 SLC35E3Q7Z769 313 aa8.46□□□□□ -1.06
LINC00239-201ENST00000556973 FOXRED2Q8IWF2 684 aa8.46□□□□□ -1.06
LINC00239-201ENST00000556973 GVQW1Q8N7I0 195 aa8.46□□□□□ -1.06
LINC00239-201ENST00000556973 C11orf44Q8N8P7 122 aa8.46□□□□□ -1.06
LINC00239-201ENST00000556973 DRAXINQ8NBI3 349 aaPredicted RBP8.46□□□□□ -1.06
LINC00239-201ENST00000556973 OR5AP2Q8NGF4 316 aa8.46□□□□□ -1.06
LINC00239-201ENST00000556973 CHPT1Q8WUD6 406 aa8.46□□□□□ -1.06
LINC00239-201ENST00000556973 RBMXL1Q96E39 390 aaKnown RBP8.46□□□□□ -1.06
LINC00239-201ENST00000556973 RITA1Q96K30 269 aa8.46□□□□□ -1.06
LINC00239-201ENST00000556973 GON7Q9BXV9 100 aa8.46□□□□□ -1.06
LINC00239-201ENST00000556973 NECAP2Q9NVZ3 263 aa8.46□□□□□ -1.06
LINC00239-201ENST00000556973 KIAA1456Q9P272 454 aa8.46□□□□□ -1.06
LINC00239-201ENST00000556973 MRPS7Q9Y2R9 242 aaKnown RBP8.46□□□□□ -1.06
LINC00239-201ENST00000556973 NBR2O15453 112 aa8.45□□□□□ -1.06
LINC00239-201ENST00000556973 KCNAB3O43448 404 aa8.45□□□□□ -1.06
LINC00239-201ENST00000556973 NDUFA3O95167 84 aa8.45□□□□□ -1.06
LINC00239-201ENST00000556973 APOA2P02652 100 aa8.45□□□□□ -1.06
LINC00239-201ENST00000556973 CSF1P09603 554 aa8.45□□□□□ -1.06
LINC00239-201ENST00000556973 ELK1P19419 428 aa8.45□□□□□ -1.06
LINC00239-201ENST00000556973 NFYAP23511 347 aaPredicted RBP8.45□□□□□ -1.06
LINC00239-201ENST00000556973 C2orf68Q2NKX9 166 aa8.45□□□□□ -1.06
LINC00239-201ENST00000556973 LIN54Q6MZP7 749 aa8.45□□□□□ -1.06
LINC00239-201ENST00000556973 PDPNQ86YL7 162 aa8.45□□□□□ -1.06
LINC00239-201ENST00000556973 ZNF645Q8N7E2 425 aa8.45□□□□□ -1.06
LINC00239-201ENST00000556973 ZNF383Q8NA42 475 aa8.45□□□□□ -1.06
LINC00239-201ENST00000556973 OR4X2Q8NGF9 303 aa8.45□□□□□ -1.06
LINC00239-201ENST00000556973 FLYWCH2Q96CP2 140 aaKnown RBP8.45□□□□□ -1.06
LINC00239-201ENST00000556973 ADTRPQ96IZ2 230 aa8.45□□□□□ -1.06
LINC00239-201ENST00000556973 IFT46Q9NQC8 304 aa8.45□□□□□ -1.06
LINC00239-201ENST00000556973 PSMB11A5LHX3 300 aa8.44□□□□□ -1.06
LINC00239-201ENST00000556973 LINC01548A6NM66 108 aa8.44□□□□□ -1.06
LINC00239-201ENST00000556973 FAM25AB3EWG3 89 aa8.44□□□□□ -1.06
LINC00239-201ENST00000556973 FAM25CB3EWG5 89 aa8.44□□□□□ -1.06
LINC00239-201ENST00000556973 FAM25GB3EWG6 89 aa8.44□□□□□ -1.06
LINC00239-201ENST00000556973 J3QRK9 145 aa8.44□□□□□ -1.06
LINC00239-201ENST00000556973 AP4M1O00189 453 aa8.44□□□□□ -1.06
LINC00239-201ENST00000556973 NOL3O60936 208 aaKnown RBP8.44□□□□□ -1.06
LINC00239-201ENST00000556973 TUSC2O75896 110 aa8.44□□□□□ -1.06
LINC00239-201ENST00000556973 OR5H8P0DN80 308 aa8.44□□□□□ -1.06
LINC00239-201ENST00000556973 RRASP10301 218 aa8.44□□□□□ -1.06
LINC00239-201ENST00000556973 NAT1P18440 290 aa8.44□□□□□ -1.06
LINC00239-201ENST00000556973 CNTFRP26992 372 aa8.44□□□□□ -1.06
LINC00239-201ENST00000556973 THBS3P49746 956 aa8.44□□□□□ -1.06
LINC00239-201ENST00000556973 LINC00205P59089 165 aa8.44□□□□□ -1.06
LINC00239-201ENST00000556973 SLC35B1P78383 322 aa8.44□□□□□ -1.06
LINC00239-201ENST00000556973 CD83Q01151 205 aa8.44□□□□□ -1.06
LINC00239-201ENST00000556973 SPCS2Q15005 226 aa8.44□□□□□ -1.06
LINC00239-201ENST00000556973 C5orf64Q2M2E5 130 aa8.44□□□□□ -1.06
LINC00239-201ENST00000556973 TREML4Q6UXN2 200 aa8.44□□□□□ -1.06
LINC00239-201ENST00000556973 NDUFA11Q86Y39 141 aa8.44□□□□□ -1.06
LINC00239-201ENST00000556973 STPG2Q8N412 459 aa8.44□□□□□ -1.06
LINC00239-201ENST00000556973 GIMAP1Q8WWP7 306 aa8.44□□□□□ -1.06
LINC00239-201ENST00000556973 NOL4LQ96MY1 436 aaPredicted RBP8.44□□□□□ -1.06
LINC00239-201ENST00000556973 CITED2Q99967 270 aaPredicted RBP8.44□□□□□ -1.06
LINC00239-201ENST00000556973 SLC35D1Q9NTN3 355 aa8.44□□□□□ -1.06
LINC00239-201ENST00000556973 ZNF107Q9UII5 783 aaPredicted RBP8.44□□□□□ -1.06
LINC00239-201ENST00000556973 MEIS3P1A6NDR6 274 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 SULT1C2O00338 296 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 RRHO14718 337 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 TPPPO94811 219 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 HLA-DRB1P01911 266 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 OPN1MWP04001 364 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 IGKV1-16P04430 117 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 IGF1P05019 195 aa8.43□□□□□ -1.06
LINC00239-201ENST00000556973 OPN1MW2P0DN77 364 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms