RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 TNFRSF14Q92956 283 aa19.4■□□□□ 0.7
SIX4-203ENST00000556952 REG4Q9BYZ8 158 aa19.4■□□□□ 0.7
SIX4-203ENST00000556952 LIN7CQ9NUP9 197 aaKnown RBP19.4■□□□□ 0.7
SIX4-203ENST00000556952 SMAD7O15105 426 aaKnown RBP19.4■□□□□ 0.7
SIX4-203ENST00000556952 CCNKO75909 580 aa19.4■□□□□ 0.7
SIX4-203ENST00000556952 SRPXP78539 464 aa19.4■□□□□ 0.7
SIX4-203ENST00000556952 TMEM187Q14656 261 aa19.4■□□□□ 0.7
SIX4-203ENST00000556952 ZNF66Q6ZN08 573 aa19.4■□□□□ 0.7
SIX4-203ENST00000556952 UXS1Q8NBZ7 420 aa19.4■□□□□ 0.7
SIX4-203ENST00000556952 OR9G1Q8NH87 305 aa19.4■□□□□ 0.7
SIX4-203ENST00000556952 C5orf30Q96GV9 206 aa19.4■□□□□ 0.7
SIX4-203ENST00000556952 TP53RKQ96S44 253 aa19.4■□□□□ 0.7
SIX4-203ENST00000556952 HSD17B10Q99714 261 aaKnown RBP19.4■□□□□ 0.7
SIX4-203ENST00000556952 METTL8Q9H825 291 aaKnown RBP19.4■□□□□ 0.7
SIX4-203ENST00000556952 MGAT4CQ9UBM8 478 aa19.4■□□□□ 0.7
SIX4-203ENST00000556952 KPTNQ9Y664 436 aa19.4■□□□□ 0.7
SIX4-203ENST00000556952 DBX1A6NMT0 343 aa19.39■□□□□ 0.69
SIX4-203ENST00000556952 USF1P22415 310 aaPredicted RBP19.39■□□□□ 0.69
SIX4-203ENST00000556952 CATR1Q13166 79 aa19.39■□□□□ 0.69
SIX4-203ENST00000556952 ANKRD55Q3KP44 614 aa19.39■□□□□ 0.69
SIX4-203ENST00000556952 ABHD12Q8N2K0 398 aa19.39■□□□□ 0.69
SIX4-203ENST00000556952 Q8N7P7 452 aa19.39■□□□□ 0.69
SIX4-203ENST00000556952 A0A1W2PPE3 182 aa19.38■□□□□ 0.69
SIX4-203ENST00000556952 J3QR06 171 aa19.38■□□□□ 0.69
SIX4-203ENST00000556952 ARF6P62330 175 aa19.38■□□□□ 0.69
SIX4-203ENST00000556952 LIAT1Q6ZQX7 453 aa19.38■□□□□ 0.69
SIX4-203ENST00000556952 LYG1Q8N1E2 194 aa19.38■□□□□ 0.69
SIX4-203ENST00000556952 LRTM2Q8N967 370 aa19.38■□□□□ 0.69
SIX4-203ENST00000556952 OR51H1Q8NH63 302 aa19.38■□□□□ 0.69
SIX4-203ENST00000556952 GLYATL2Q8WU03 294 aa19.38■□□□□ 0.69
SIX4-203ENST00000556952 C18orf12Q96KH6 178 aa19.38■□□□□ 0.69
SIX4-203ENST00000556952 GPHA2Q96T91 129 aa19.38■□□□□ 0.69
SIX4-203ENST00000556952 TMEM222Q9H0R3 208 aa19.38■□□□□ 0.69
SIX4-203ENST00000556952 SAA2-SAA4A0A096LPE2 208 aa19.37■□□□□ 0.69
SIX4-203ENST00000556952 IGHV2-26A0A0B4J1V2 119 aa19.37■□□□□ 0.69
SIX4-203ENST00000556952 FAM157AC9JC47 383 aa19.37■□□□□ 0.69
SIX4-203ENST00000556952 SAA2P0DJI9 122 aaPredicted RBP19.37■□□□□ 0.69
SIX4-203ENST00000556952 HLA-GP17693 338 aa19.37■□□□□ 0.69
SIX4-203ENST00000556952 CXCL3P19876 107 aa19.37■□□□□ 0.69
SIX4-203ENST00000556952 UCP1P25874 307 aa19.37■□□□□ 0.69
SIX4-203ENST00000556952 SP6Q3SY56 376 aa19.37■□□□□ 0.69
SIX4-203ENST00000556952 LIN54Q6MZP7 749 aa19.37■□□□□ 0.69
SIX4-203ENST00000556952 BTNL3Q6UXE8 466 aa19.37■□□□□ 0.69
SIX4-203ENST00000556952 ODF3L1Q8IXM7 274 aa19.37■□□□□ 0.69
SIX4-203ENST00000556952 TCTEX1D1Q8N7M0 179 aa19.37■□□□□ 0.69
SIX4-203ENST00000556952 CLEC7AQ9BXN2 247 aa19.37■□□□□ 0.69
SIX4-203ENST00000556952 ABCA2Q9BZC7 2435 aa19.37■□□□□ 0.69
SIX4-203ENST00000556952 PIGBOS1A0A0B4J2F0 54 aa19.36■□□□□ 0.69
SIX4-203ENST00000556952 GOSR2O14653 212 aa19.36■□□□□ 0.69
SIX4-203ENST00000556952 PRTN3P24158 256 aa19.36■□□□□ 0.69
SIX4-203ENST00000556952 LGI3Q8N145 548 aa19.36■□□□□ 0.69
SIX4-203ENST00000556952 OR13D1Q8NGV5 346 aa19.36■□□□□ 0.69
SIX4-203ENST00000556952 PPP1R14BQ96C90 147 aa19.36■□□□□ 0.69
SIX4-203ENST00000556952 MSI2Q96DH6 328 aaKnown RBP19.36■□□□□ 0.69
SIX4-203ENST00000556952 S1PR3Q99500 378 aa19.36■□□□□ 0.69
SIX4-203ENST00000556952 SMR3AQ99954 134 aa19.36■□□□□ 0.69
SIX4-203ENST00000556952 UNKLQ9H9P5 680 aaKnown RBP19.36■□□□□ 0.69
SIX4-203ENST00000556952 RAB18Q9NP72 206 aa19.36■□□□□ 0.69
SIX4-203ENST00000556952 TLN2Q9Y4G6 2542 aa19.36■□□□□ 0.69
SIX4-203ENST00000556952 ARHGAP32A7KAX9 2087 aa19.36■□□□□ 0.69
SIX4-203ENST00000556952 TOR1AO14656 332 aa19.36■□□□□ 0.69
SIX4-203ENST00000556952 CD83Q01151 205 aa19.36■□□□□ 0.69
SIX4-203ENST00000556952 FAM71F2Q6NXP2 309 aa19.36■□□□□ 0.69
SIX4-203ENST00000556952 BEND2Q8NDZ0 799 aa19.36■□□□□ 0.69
SIX4-203ENST00000556952 OR5M8Q8NGP6 311 aa19.36■□□□□ 0.69
SIX4-203ENST00000556952 OR10X1Q8NGY0 326 aa19.36■□□□□ 0.69
SIX4-203ENST00000556952 ST6GAL2Q96JF0 529 aa19.36■□□□□ 0.69
SIX4-203ENST00000556952 TMEM56Q96MV1 263 aa19.36■□□□□ 0.69
SIX4-203ENST00000556952 FAM212BQ9NTI7 297 aaPredicted RBP19.36■□□□□ 0.69
SIX4-203ENST00000556952 PRR13Q9NZ81 148 aa19.36■□□□□ 0.69
SIX4-203ENST00000556952 TMEM56-RWDD3S4R434 201 aa19.36■□□□□ 0.69
SIX4-203ENST00000556952 PRRX1P54821 245 aa19.35■□□□□ 0.69
SIX4-203ENST00000556952 RPL39P5Q59GN2 51 aa19.35■□□□□ 0.69
SIX4-203ENST00000556952 ASB13Q8WXK3 278 aa19.35■□□□□ 0.69
SIX4-203ENST00000556952 ZNF251Q9BRH9 671 aa19.35■□□□□ 0.69
SIX4-203ENST00000556952 ZNF436Q9C0F3 470 aaPredicted RBP19.35■□□□□ 0.69
SIX4-203ENST00000556952 M0R1X1 148 aa19.34■□□□□ 0.69
SIX4-203ENST00000556952 PROP1O75360 226 aa19.34■□□□□ 0.69
SIX4-203ENST00000556952 CDS2O95674 445 aa19.34■□□□□ 0.69
SIX4-203ENST00000556952 IL3RAP26951 378 aa19.34■□□□□ 0.69
SIX4-203ENST00000556952 DUTP33316 252 aaKnown RBP19.34■□□□□ 0.69
SIX4-203ENST00000556952 ZNF137PP52743 207 aa19.34■□□□□ 0.69
SIX4-203ENST00000556952 C2orf68Q2NKX9 166 aa19.34■□□□□ 0.69
SIX4-203ENST00000556952 ZNF833PQ6ZTB9 187 aa19.34■□□□□ 0.69
SIX4-203ENST00000556952 LURAP1LQ8IV03 231 aa19.34■□□□□ 0.69
SIX4-203ENST00000556952 TCTEX1D2Q8WW35 142 aa19.34■□□□□ 0.69
SIX4-203ENST00000556952 IL22RA2Q969J5 263 aa19.34■□□□□ 0.69
SIX4-203ENST00000556952 SIRPDQ9H106 197 aa19.34■□□□□ 0.69
SIX4-203ENST00000556952 HEXA-AS1Q9H8Q6 139 aa19.34■□□□□ 0.69
SIX4-203ENST00000556952 MMP26Q9NRE1 261 aa19.34■□□□□ 0.69
SIX4-203ENST00000556952 CSPG4Q6UVK1 2322 aa19.34■□□□□ 0.69
SIX4-203ENST00000556952 MTORP42345 2549 aa19.33■□□□□ 0.69
SIX4-203ENST00000556952 IGLV1-47P01700 117 aa19.33■□□□□ 0.69
SIX4-203ENST00000556952 SERPINE2P07093 398 aa19.33■□□□□ 0.69
SIX4-203ENST00000556952 ZNF16P17020 682 aaPredicted RBP19.33■□□□□ 0.69
SIX4-203ENST00000556952 DVL1P1P54792 670 aaPredicted RBP19.33■□□□□ 0.69
SIX4-203ENST00000556952 RPL30P62888 115 aaKnown RBP19.33■□□□□ 0.69
SIX4-203ENST00000556952 TMEM186Q96B77 213 aa19.33■□□□□ 0.69
SIX4-203ENST00000556952 C1orf159Q96HA4 380 aa19.33■□□□□ 0.69
SIX4-203ENST00000556952 ADTRPQ96IZ2 230 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms