RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 SMIM3Q9BZL3 60 aa5.17□□□□□ -1.58
CPSF2-205ENST00000556622 OBP2BQ9NPH6 170 aa5.17□□□□□ -1.58
CPSF2-205ENST00000556622 SLC7A10Q9NS82 523 aa5.17□□□□□ -1.58
CPSF2-205ENST00000556622 TMEM140Q9NV12 185 aa5.17□□□□□ -1.58
CPSF2-205ENST00000556622 TAAR3PQ9P1P4 343 aa5.17□□□□□ -1.58
CPSF2-205ENST00000556622 CACNA1CQ13936 2221 aa5.17□□□□□ -1.58
CPSF2-205ENST00000556622 SVILO95425 2214 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 IGKV1-27A0A075B6S5 117 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 TRAV17A0A0B4J275 112 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 NKX2-6A6NCS4 301 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 C5orf52A6NGY3 159 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 SLC22A20A6NK97 555 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 SEC14L6B5MCN3 397 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 CLDN34H7C241 214 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 AGPAT2O15120 278 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 ADAM20O43506 726 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 SYNGR2O43760 224 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 SSSCA1O60232 199 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 NME2P1O60361 137 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 MPDU1O75352 247 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 HLA-HP01893 362 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 OPN1MWP04001 364 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 OPN1MW2P0DN77 364 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 OPN1MW3P0DN78 364 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 CCNOP22674 350 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 ATP6V0CP27449 155 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 RPL35P42766 123 aaKnown RBP5.16□□□□□ -1.58
CPSF2-205ENST00000556622 NPBWR1P48145 328 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 GPM6AP51674 278 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 ESPL1Q14674 2120 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 BEAN1Q3B7T3 259 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 SP6Q3SY56 376 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 NMSQ5H8A3 153 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 TSPO2Q5TGU0 170 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 FBXW9Q5XUX1 488 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 ZNF880Q6PDB4 577 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 TMEM182Q6ZP80 229 aaPredicted RBP5.16□□□□□ -1.58
CPSF2-205ENST00000556622 ZNF429Q86V71 674 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 CBLN2Q8IUK8 224 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 WDFY1Q8IWB7 410 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 GAPTQ8N292 157 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 OR56B2PQ8NGI1 322 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 NEU4Q8WWR8 484 aaPredicted RBP5.16□□□□□ -1.58
CPSF2-205ENST00000556622 ROBO4Q8WZ75 1007 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 GALMQ96C23 342 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 SNRNP40Q96DI7 357 aaKnown RBP5.16□□□□□ -1.58
CPSF2-205ENST00000556622 GMPPAQ96IJ6 420 aaPredicted RBP5.16□□□□□ -1.58
CPSF2-205ENST00000556622 TP53RKQ96S44 253 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 MAGT1Q9H0U3 335 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 SEBOXQ9HB31 216 aaPredicted RBP5.16□□□□□ -1.58
CPSF2-205ENST00000556622 CDH20Q9HBT6 801 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 MANBALQ9NQG1 85 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 CISD1Q9NZ45 108 aaKnown RBP5.16□□□□□ -1.58
CPSF2-205ENST00000556622 VAX2Q9UIW0 290 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 TRAPPC2LQ9UL33 140 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 FAM96BQ9Y3D0 163 aa5.16□□□□□ -1.58
CPSF2-205ENST00000556622 KALRNO60229 2985 aa5.15□□□□□ -1.58
CPSF2-205ENST00000556622 IGKV1D-8A0A087WSZ0 117 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 IGKV1-12A0A0C4DH73 117 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 TMEM30CPA0ZSE6 113 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 MEX3AA1L020 520 aaKnown RBP5.15□□□□□ -1.59
CPSF2-205ENST00000556622 SMCO3A2RU48 225 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 OOEPA6NGQ2 149 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 LRRC3CA6NJW4 275 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 FAM90A9PA6NNJ1 464 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 FAM157AC9JC47 383 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 E9PLN8 166 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 TMEM250H0YL14 139 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 IFNL4K9M1U5 179 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 PPP1R2P9O14990 202 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 CYB5BO43169 146 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 TXNL1O43396 289 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 CHST1O43916 411 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 SS18L1O75177 396 aaPredicted RBP5.15□□□□□ -1.59
CPSF2-205ENST00000556622 IGKV1D-12P01611 117 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 SP1P08047 785 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 BCL3P20749 454 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 GNLYP22749 145 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 GCSHP23434 173 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 PSMB3P49720 205 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 LHX2P50458 406 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 TNFSF10P50591 281 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 ATP5IP56385 69 aaPredicted RBP5.15□□□□□ -1.59
CPSF2-205ENST00000556622 B2MP61769 119 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 ODF1Q14990 250 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 ZNF146Q15072 292 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 OR1C1Q15619 314 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 TMEM30BQ3MIR4 351 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 ZNF766Q5HY98 468 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 SPINK14Q6IE38 97 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 ADAM5Q6NVV9 412 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 ZNF66Q6ZN08 573 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 SSX8Q7RTT4 187 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 P4HA3Q7Z4N8 544 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 FAM90A1Q86YD7 464 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 C1orf87Q8N0U7 546 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 C17orf78Q8N4C9 275 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 Q8NA96 180 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 OR52M1Q8NGK5 317 aa5.15□□□□□ -1.59
CPSF2-205ENST00000556622 NANPQ8TBE9 248 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms