RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 C16orf87Q6PH81 154 aa9.12□□□□□ -0.95
FOXN3-212ENST00000556541 IDO2Q6ZQW0 420 aa9.12□□□□□ -0.95
FOXN3-212ENST00000556541 DUSP18Q8NEJ0 188 aa9.12□□□□□ -0.95
FOXN3-212ENST00000556541 OR8U1Q8NH10 309 aa9.12□□□□□ -0.95
FOXN3-212ENST00000556541 ZFAND2BQ8WV99 257 aa9.12□□□□□ -0.95
FOXN3-212ENST00000556541 LEAP2Q969E1 77 aa9.12□□□□□ -0.95
FOXN3-212ENST00000556541 MRGPRFQ96AM1 343 aa9.12□□□□□ -0.95
FOXN3-212ENST00000556541 SLC5A7Q9GZV3 580 aa9.12□□□□□ -0.95
FOXN3-212ENST00000556541 OR2D2Q9H210 308 aa9.12□□□□□ -0.95
FOXN3-212ENST00000556541 MCUBQ9NWR8 336 aa9.12□□□□□ -0.95
FOXN3-212ENST00000556541 GPR132Q9UNW8 380 aa9.12□□□□□ -0.95
FOXN3-212ENST00000556541 MTORP42345 2549 aa9.11□□□□□ -0.95
FOXN3-212ENST00000556541 HAX1O00165 279 aa9.11□□□□□ -0.95
FOXN3-212ENST00000556541 GPR31O00270 319 aa9.11□□□□□ -0.95
FOXN3-212ENST00000556541 HSD17B6O14756 317 aa9.11□□□□□ -0.95
FOXN3-212ENST00000556541 ST8SIA5O15466 376 aa9.11□□□□□ -0.95
FOXN3-212ENST00000556541 PROP1O75360 226 aa9.11□□□□□ -0.95
FOXN3-212ENST00000556541 S100GP29377 79 aa9.11□□□□□ -0.95
FOXN3-212ENST00000556541 MECP2P51608 486 aaKnown RBP9.11□□□□□ -0.95
FOXN3-212ENST00000556541 RAG2P55895 527 aa9.11□□□□□ -0.95
FOXN3-212ENST00000556541 DLX1P56177 255 aa9.11□□□□□ -0.95
FOXN3-212ENST00000556541 LDLRAD2Q5SZI1 272 aa9.11□□□□□ -0.95
FOXN3-212ENST00000556541 FAAP20Q6NZ36 180 aa9.11□□□□□ -0.95
FOXN3-212ENST00000556541 KCTD9Q7L273 389 aa9.11□□□□□ -0.95
FOXN3-212ENST00000556541 THNSL2Q86YJ6 484 aa9.11□□□□□ -0.95
FOXN3-212ENST00000556541 CMTM1Q8IZ96 169 aa9.11□□□□□ -0.95
FOXN3-212ENST00000556541 LYG1Q8N1E2 194 aa9.11□□□□□ -0.95
FOXN3-212ENST00000556541 DRAM1Q8N682 238 aa9.11□□□□□ -0.95
FOXN3-212ENST00000556541 RTN4IP1Q8WWV3 396 aaPredicted RBP9.11□□□□□ -0.95
FOXN3-212ENST00000556541 TOMM40LQ969M1 308 aa9.11□□□□□ -0.95
FOXN3-212ENST00000556541 RPEQ96AT9 228 aa9.11□□□□□ -0.95
FOXN3-212ENST00000556541 ALX4Q9H161 411 aaPredicted RBP9.11□□□□□ -0.95
FOXN3-212ENST00000556541 OCEL1Q9H607 264 aa9.11□□□□□ -0.95
FOXN3-212ENST00000556541 SDHAF2Q9NX18 166 aa9.11□□□□□ -0.95
FOXN3-212ENST00000556541 RBM7Q9Y580 266 aaKnown RBP9.11□□□□□ -0.95
FOXN3-212ENST00000556541 NSD1Q96L73 2696 aaPredicted RBP9.1□□□□□ -0.95
FOXN3-212ENST00000556541 A0A1W2PPI3 338 aa9.1□□□□□ -0.95
FOXN3-212ENST00000556541 FAM90A9PA6NNJ1 464 aa9.1□□□□□ -0.95
FOXN3-212ENST00000556541 RNF212BA8MTL3 300 aa9.1□□□□□ -0.95
FOXN3-212ENST00000556541 RBFOX2O43251 390 aaKnown RBP eCLIP9.1□□□□□ -0.953e-8■■■■■ 28.6
FOXN3-212ENST00000556541 PTTG1O95997 202 aa9.1□□□□□ -0.95
FOXN3-212ENST00000556541 RRASP10301 218 aa9.1□□□□□ -0.95
FOXN3-212ENST00000556541 CD1BP29016 333 aa9.1□□□□□ -0.95
FOXN3-212ENST00000556541 MC5RP33032 325 aa9.1□□□□□ -0.95
FOXN3-212ENST00000556541 DUTP33316 252 aaKnown RBP9.1□□□□□ -0.95
FOXN3-212ENST00000556541 KIR2DS2P43631 304 aa9.1□□□□□ -0.95
FOXN3-212ENST00000556541 THBS3P49746 956 aa9.1□□□□□ -0.95
FOXN3-212ENST00000556541 SCGB2B2Q4G0G5 96 aa9.1□□□□□ -0.95
FOXN3-212ENST00000556541 TGIF2LXQ8IUE1 241 aa9.1□□□□□ -0.95
FOXN3-212ENST00000556541 CADM3Q8N126 398 aa9.1□□□□□ -0.95
FOXN3-212ENST00000556541 TMEM86BQ8N661 226 aa9.1□□□□□ -0.95
FOXN3-212ENST00000556541 CCDC71LQ8N9Z2 235 aa9.1□□□□□ -0.95
FOXN3-212ENST00000556541 OR5AN1Q8NGI8 311 aa9.1□□□□□ -0.95
FOXN3-212ENST00000556541 SECTM1Q8WVN6 248 aa9.1□□□□□ -0.95
FOXN3-212ENST00000556541 DDB2Q92466 427 aa9.1□□□□□ -0.95
FOXN3-212ENST00000556541 ABHD14BQ96IU4 210 aa9.1□□□□□ -0.95
FOXN3-212ENST00000556541 SMR3AQ99954 134 aa9.1□□□□□ -0.95
FOXN3-212ENST00000556541 MS4A7Q9GZW8 240 aaPredicted RBP9.1□□□□□ -0.95
FOXN3-212ENST00000556541 DPAGT1Q9H3H5 408 aa9.1□□□□□ -0.95
FOXN3-212ENST00000556541 ZNRD1Q9P1U0 126 aa9.1□□□□□ -0.95
FOXN3-212ENST00000556541 SONP18583 2426 aaKnown RBP9.09□□□□□ -0.95
FOXN3-212ENST00000556541 PIGBOS1A0A0B4J2F0 54 aa9.09□□□□□ -0.95
FOXN3-212ENST00000556541 IGHV1-3A0A0C4DH29 117 aa9.09□□□□□ -0.95
FOXN3-212ENST00000556541 A0A1W2PPE3 182 aa9.09□□□□□ -0.95
FOXN3-212ENST00000556541 BRS3P32247 399 aa9.09□□□□□ -0.95
FOXN3-212ENST00000556541 RAB13P51153 203 aa9.09□□□□□ -0.95
FOXN3-212ENST00000556541 TAS2R31P59538 309 aa9.09□□□□□ -0.95
FOXN3-212ENST00000556541 FXYD4P59646 89 aa9.09□□□□□ -0.95
FOXN3-212ENST00000556541 DHODHQ02127 395 aa9.09□□□□□ -0.95
FOXN3-212ENST00000556541 CATR1Q13166 79 aa9.09□□□□□ -0.95
FOXN3-212ENST00000556541 EBI3Q14213 229 aa9.09□□□□□ -0.95
FOXN3-212ENST00000556541 DHRS7BQ6IAN0 325 aaPredicted RBP9.09□□□□□ -0.95
FOXN3-212ENST00000556541 ZNF818PQ6ZRF7 136 aa9.09□□□□□ -0.95
FOXN3-212ENST00000556541 LHFPL4Q7Z7J7 247 aa9.09□□□□□ -0.95
FOXN3-212ENST00000556541 MARCH1Q8TCQ1 289 aa9.09□□□□□ -0.95
FOXN3-212ENST00000556541 CD300LFQ8TDQ1 290 aa9.09□□□□□ -0.95
FOXN3-212ENST00000556541 CFHR4Q92496 578 aa9.09□□□□□ -0.95
FOXN3-212ENST00000556541 C5orf30Q96GV9 206 aa9.09□□□□□ -0.95
FOXN3-212ENST00000556541 RNF5Q99942 180 aa9.09□□□□□ -0.95
FOXN3-212ENST00000556541 NABP2Q9BQ15 211 aa9.09□□□□□ -0.95
FOXN3-212ENST00000556541 C5orf66Q9H5L9 145 aa9.09□□□□□ -0.95
FOXN3-212ENST00000556541 CCL28Q9NRJ3 127 aa9.09□□□□□ -0.95
FOXN3-212ENST00000556541 SLC2A9Q9NRM0 540 aa9.09□□□□□ -0.95
FOXN3-212ENST00000556541 C14orf166Q9Y224 244 aaKnown RBP9.09□□□□□ -0.95
FOXN3-212ENST00000556541 NUBP2Q9Y5Y2 271 aa9.09□□□□□ -0.95
FOXN3-212ENST00000556541 FBN3Q75N90 2809 aa9.09□□□□□ -0.95
FOXN3-212ENST00000556541 A0A0U1RQK1 487 aa9.08□□□□□ -0.96
FOXN3-212ENST00000556541 FAM240BA0A1B0GVZ2 78 aa9.08□□□□□ -0.96
FOXN3-212ENST00000556541 PGLYRP1O75594 196 aaPredicted RBP9.08□□□□□ -0.96
FOXN3-212ENST00000556541 IGHV3-7P01780 117 aa9.08□□□□□ -0.96
FOXN3-212ENST00000556541 TCRBP04435 133 aa9.08□□□□□ -0.96
FOXN3-212ENST00000556541 CT45A6P0DMU7 189 aa9.08□□□□□ -0.96
FOXN3-212ENST00000556541 CT45A5P0DMU8 189 aa9.08□□□□□ -0.96
FOXN3-212ENST00000556541 CT45A7P0DMV0 189 aa9.08□□□□□ -0.96
FOXN3-212ENST00000556541 PGAM2P15259 253 aa9.08□□□□□ -0.96
FOXN3-212ENST00000556541 SRP14P37108 136 aaKnown RBP9.08□□□□□ -0.96
FOXN3-212ENST00000556541 RPL39P5Q59GN2 51 aa9.08□□□□□ -0.96
FOXN3-212ENST00000556541 RUSC1-AS1Q66K80 236 aa9.08□□□□□ -0.96
FOXN3-212ENST00000556541 C11orf88Q6PI97 169 aa9.08□□□□□ -0.96
FOXN3-212ENST00000556541 BRD3OSQ6XYD6 125 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms