RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 MRAPQ8TCY5 172 aa9.27□□□□□ -0.93
VRK1-204ENST00000555351 C4orf3Q8WVX3 66 aa9.27□□□□□ -0.93
VRK1-204ENST00000555351 UBE2E2Q96LR5 201 aa9.27□□□□□ -0.93
VRK1-204ENST00000555351 KCTD7Q96MP8 289 aa9.27□□□□□ -0.93
VRK1-204ENST00000555351 CABLES2Q9BTV7 478 aa9.27□□□□□ -0.93
VRK1-204ENST00000555351 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.27□□□□□ -0.932e-6■■■■□ 21.7
VRK1-204ENST00000555351 ZNF221Q9UK13 617 aa9.27□□□□□ -0.93
VRK1-204ENST00000555351 KCNK7Q9Y2U2 307 aa9.27□□□□□ -0.93
VRK1-204ENST00000555351 NOTCH3Q9UM47 2321 aa9.27□□□□□ -0.93
VRK1-204ENST00000555351 IGHV7-81A0A0B4J1V7 117 aa9.26□□□□□ -0.93
VRK1-204ENST00000555351 IGKV1-6A0A0C4DH72 117 aa9.26□□□□□ -0.93
VRK1-204ENST00000555351 SHISA3A0PJX4 238 aa9.26□□□□□ -0.93
VRK1-204ENST00000555351 RRHO14718 337 aa9.26□□□□□ -0.93
VRK1-204ENST00000555351 SCGNO76038 276 aa9.26□□□□□ -0.93
VRK1-204ENST00000555351 SPDEFO95238 335 aa9.26□□□□□ -0.93
VRK1-204ENST00000555351 FCGR3AP08637 254 aa9.26□□□□□ -0.93
VRK1-204ENST00000555351 SLC2A2P11168 524 aaPredicted RBP9.26□□□□□ -0.93
VRK1-204ENST00000555351 HIST1H1DP16402 221 aaKnown RBP9.26□□□□□ -0.93
VRK1-204ENST00000555351 DCTN2Q13561 401 aaKnown RBP9.26□□□□□ -0.93
VRK1-204ENST00000555351 RPL39P5Q59GN2 51 aa9.26□□□□□ -0.93
VRK1-204ENST00000555351 PDPNQ86YL7 162 aa9.26□□□□□ -0.93
VRK1-204ENST00000555351 MINDY2Q8NBR6 621 aa9.26□□□□□ -0.93
VRK1-204ENST00000555351 RAX2Q96IS3 184 aa9.26□□□□□ -0.93
VRK1-204ENST00000555351 ABHD14BQ96IU4 210 aa9.26□□□□□ -0.93
VRK1-204ENST00000555351 RITA1Q96K30 269 aa9.26□□□□□ -0.93
VRK1-204ENST00000555351 PARP12Q9H0J9 701 aaKnown RBP9.26□□□□□ -0.93
VRK1-204ENST00000555351 OR1A1Q9P1Q5 309 aa9.26□□□□□ -0.93
VRK1-204ENST00000555351 STUB1Q9UNE7 303 aa9.26□□□□□ -0.93
VRK1-204ENST00000555351 TRBV6-7A0A0A0MS04 114 aa9.25□□□□□ -0.93
VRK1-204ENST00000555351 TRAV41A0A0B4J266 112 aa9.25□□□□□ -0.93
VRK1-204ENST00000555351 NOTOA8MTQ0 251 aa9.25□□□□□ -0.93
VRK1-204ENST00000555351 ATP6V0E1O15342 81 aa9.25□□□□□ -0.93
VRK1-204ENST00000555351 FABP7O15540 132 aa9.25□□□□□ -0.93
VRK1-204ENST00000555351 TMEM127O75204 238 aa9.25□□□□□ -0.93
VRK1-204ENST00000555351 PROP1O75360 226 aa9.25□□□□□ -0.93
VRK1-204ENST00000555351 PRB2P02812 416 aaPredicted RBP9.25□□□□□ -0.93
VRK1-204ENST00000555351 TFAP2AP05549 437 aa9.25□□□□□ -0.93
VRK1-204ENST00000555351 GSTP1P09211 210 aaKnown RBP9.25□□□□□ -0.93
VRK1-204ENST00000555351 CNTFRP26992 372 aa9.25□□□□□ -0.93
VRK1-204ENST00000555351 SCAND1P57086 179 aa9.25□□□□□ -0.93
VRK1-204ENST00000555351 OR10A3P58181 314 aa9.25□□□□□ -0.93
VRK1-204ENST00000555351 TMEM267Q0VDI3 215 aaPredicted RBP9.25□□□□□ -0.93
VRK1-204ENST00000555351 FHL3Q13643 280 aa9.25□□□□□ -0.93
VRK1-204ENST00000555351 C19orf54Q5BKX5 351 aa9.25□□□□□ -0.93
VRK1-204ENST00000555351 C22orf42Q6IC83 251 aa9.25□□□□□ -0.93
VRK1-204ENST00000555351 TMEM65Q6PI78 240 aa9.25□□□□□ -0.93
VRK1-204ENST00000555351 ZNF773Q6PK81 442 aa9.25□□□□□ -0.93
VRK1-204ENST00000555351 OR5M8Q8NGP6 311 aa9.25□□□□□ -0.93
VRK1-204ENST00000555351 OR10J5Q8NHC4 309 aa9.25□□□□□ -0.93
VRK1-204ENST00000555351 TSNAXQ99598 290 aaKnown RBP9.25□□□□□ -0.93
VRK1-204ENST00000555351 TXNL4BQ9NX01 149 aaKnown RBP9.25□□□□□ -0.93
VRK1-204ENST00000555351 RDH8Q9NYR8 311 aa9.25□□□□□ -0.93
VRK1-204ENST00000555351 RNF150Q9ULK6 438 aa9.25□□□□□ -0.93
VRK1-204ENST00000555351 H7C2Y5 167 aa9.24□□□□□ -0.93
VRK1-204ENST00000555351 RAMP3O60896 148 aa9.24□□□□□ -0.93
VRK1-204ENST00000555351 APOA2P02652 100 aa9.24□□□□□ -0.93
VRK1-204ENST00000555351 DTYMKP23919 212 aa9.24□□□□□ -0.93
VRK1-204ENST00000555351 PSMB9P28065 219 aa9.24□□□□□ -0.93
VRK1-204ENST00000555351 CX3CL1P78423 397 aa9.24□□□□□ -0.93
VRK1-204ENST00000555351 PLA2G7Q13093 441 aa9.24□□□□□ -0.93
VRK1-204ENST00000555351 KIAA0141Q14154 515 aaPredicted RBP9.24□□□□□ -0.93
VRK1-204ENST00000555351 MOGAT2Q3SYC2 334 aa9.24□□□□□ -0.93
VRK1-204ENST00000555351 AKIRIN2Q53H80 203 aa9.24□□□□□ -0.93
VRK1-204ENST00000555351 PYHIN1Q6K0P9 492 aa9.24□□□□□ -0.93
VRK1-204ENST00000555351 ZNF562Q6V9R5 426 aa9.24□□□□□ -0.93
VRK1-204ENST00000555351 C18orf65Q6ZTR6 163 aa9.24□□□□□ -0.93
VRK1-204ENST00000555351 NR2C2APQ86WQ0 139 aa9.24□□□□□ -0.93
VRK1-204ENST00000555351 ZNF491Q8N8L2 437 aa9.24□□□□□ -0.93
VRK1-204ENST00000555351 DCSTAMPQ9H295 470 aa9.24□□□□□ -0.93
VRK1-204ENST00000555351 PARP11Q9NR21 331 aa9.24□□□□□ -0.93
VRK1-204ENST00000555351 SSR3Q9UNL2 185 aa9.24□□□□□ -0.93
VRK1-204ENST00000555351 VSIG4Q9Y279 399 aa9.24□□□□□ -0.93
VRK1-204ENST00000555351 CTXN2P0C2S0 81 aa9.23□□□□□ -0.93
VRK1-204ENST00000555351 GNB3P16520 340 aa9.23□□□□□ -0.93
VRK1-204ENST00000555351 TALDO1P37837 337 aa9.23□□□□□ -0.93
VRK1-204ENST00000555351 LGALS7P47929 136 aa9.23□□□□□ -0.93
VRK1-204ENST00000555351 PITPNAQ00169 270 aa9.23□□□□□ -0.93
VRK1-204ENST00000555351 PLGLAQ15195 96 aa9.23□□□□□ -0.93
VRK1-204ENST00000555351 PSG5Q15238 335 aa9.23□□□□□ -0.93
VRK1-204ENST00000555351 KCTD21Q4G0X4 260 aa9.23□□□□□ -0.93
VRK1-204ENST00000555351 LCNL1Q6ZST4 164 aa9.23□□□□□ -0.93
VRK1-204ENST00000555351 ZNF383Q8NA42 475 aa9.23□□□□□ -0.93
VRK1-204ENST00000555351 FLYWCH2Q96CP2 140 aaKnown RBP9.23□□□□□ -0.93
VRK1-204ENST00000555351 ADTRPQ96IZ2 230 aa9.23□□□□□ -0.93
VRK1-204ENST00000555351 FBXL15Q9H469 300 aa9.23□□□□□ -0.93
VRK1-204ENST00000555351 FOXA2Q9Y261 457 aaPredicted RBP9.23□□□□□ -0.93
VRK1-204ENST00000555351 NUBP2Q9Y5Y2 271 aa9.23□□□□□ -0.93
VRK1-204ENST00000555351 WSB1Q9Y6I7 421 aa9.23□□□□□ -0.93
VRK1-204ENST00000555351 G3V318 75 aa9.22□□□□□ -0.93
VRK1-204ENST00000555351 I3L521 148 aa9.22□□□□□ -0.93
VRK1-204ENST00000555351 K7EIL1 84 aa9.22□□□□□ -0.93
VRK1-204ENST00000555351 ARPC1BO15143 372 aaKnown RBP9.22□□□□□ -0.93
VRK1-204ENST00000555351 BET1O15155 118 aa9.22□□□□□ -0.93
VRK1-204ENST00000555351 OR8U8P0C7N1 319 aa9.22□□□□□ -0.93
VRK1-204ENST00000555351 GSTT2P0CG29 244 aa9.22□□□□□ -0.93
VRK1-204ENST00000555351 GSTT2BP0CG30 244 aa9.22□□□□□ -0.93
VRK1-204ENST00000555351 RRASP10301 218 aa9.22□□□□□ -0.93
VRK1-204ENST00000555351 RAB9AP51151 201 aa9.22□□□□□ -0.93
VRK1-204ENST00000555351 INSL3P51460 131 aa9.22□□□□□ -0.93
VRK1-204ENST00000555351 LUMP51884 338 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms