RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 OR8U1Q8NH10 309 aa8.41□□□□□ -1.06
SHMT2-213ENST00000554600 ABHD5Q8WTS1 349 aa8.41□□□□□ -1.06
SHMT2-213ENST00000554600 RITA1Q96K30 269 aa8.41□□□□□ -1.06
SHMT2-213ENST00000554600 HSPB9Q9BQS6 159 aa8.41□□□□□ -1.06
SHMT2-213ENST00000554600 AGMATQ9BSE5 352 aa8.41□□□□□ -1.06
SHMT2-213ENST00000554600 ST6GALNAC5Q9BVH7 336 aa8.41□□□□□ -1.06
SHMT2-213ENST00000554600 OR2D2Q9H210 308 aa8.41□□□□□ -1.06
SHMT2-213ENST00000554600 GHITMQ9H3K2 345 aa8.41□□□□□ -1.06
SHMT2-213ENST00000554600 PARP11Q9NR21 331 aa8.41□□□□□ -1.06
SHMT2-213ENST00000554600 RHBDL2Q9NX52 303 aa8.41□□□□□ -1.06
SHMT2-213ENST00000554600 ELF5Q9UKW6 265 aaPredicted RBP8.41□□□□□ -1.06
SHMT2-213ENST00000554600 WASHC3Q9Y3C0 194 aa8.41□□□□□ -1.06
SHMT2-213ENST00000554600 TMEM235A6NFC5 223 aa8.4□□□□□ -1.06
SHMT2-213ENST00000554600 H0YJW9 148 aa8.4□□□□□ -1.06
SHMT2-213ENST00000554600 M0R1X1 148 aa8.4□□□□□ -1.06
SHMT2-213ENST00000554600 APOA2P02652 100 aa8.4□□□□□ -1.06
SHMT2-213ENST00000554600 TFAP2AP05549 437 aa8.4□□□□□ -1.06
SHMT2-213ENST00000554600 RPS16P62249 146 aaKnown RBP8.4□□□□□ -1.06
SHMT2-213ENST00000554600 RPL23AP62750 156 aaKnown RBP8.4□□□□□ -1.06
SHMT2-213ENST00000554600 PNLIPRP3Q17RR3 467 aa8.4□□□□□ -1.06
SHMT2-213ENST00000554600 C5orf64Q2M2E5 130 aa8.4□□□□□ -1.06
SHMT2-213ENST00000554600 CXorf66Q5JRM2 361 aaPredicted RBP8.4□□□□□ -1.06
SHMT2-213ENST00000554600 HACD4Q5VWC8 232 aa8.4□□□□□ -1.06
SHMT2-213ENST00000554600 TEX38Q6PEX7 206 aa8.4□□□□□ -1.06
SHMT2-213ENST00000554600 LCNL1Q6ZST4 164 aa8.4□□□□□ -1.06
SHMT2-213ENST00000554600 COMMD1Q8N668 190 aa8.4□□□□□ -1.06
SHMT2-213ENST00000554600 KLHL30-AS1Q8NEE0 82 aa8.4□□□□□ -1.06
SHMT2-213ENST00000554600 OR5H6Q8NGV6 325 aa8.4□□□□□ -1.06
SHMT2-213ENST00000554600 NUDCD2Q8WVJ2 157 aa8.4□□□□□ -1.06
SHMT2-213ENST00000554600 CABLES2Q9BTV7 478 aa8.4□□□□□ -1.06
SHMT2-213ENST00000554600 FBXL15Q9H469 300 aa8.4□□□□□ -1.06
SHMT2-213ENST00000554600 ETV7Q9Y603 341 aa8.4□□□□□ -1.06
SHMT2-213ENST00000554600 WSB1Q9Y6I7 421 aa8.4□□□□□ -1.06
SHMT2-213ENST00000554600 NBEAL2Q6ZNJ1 2754 aa8.39□□□□□ -1.07
SHMT2-213ENST00000554600 TRAV18A0A075B6X5 111 aa8.39□□□□□ -1.07
SHMT2-213ENST00000554600 TRBV6-7A0A0A0MS04 114 aa8.39□□□□□ -1.07
SHMT2-213ENST00000554600 TRIM64CA6NLI5 447 aa8.39□□□□□ -1.07
SHMT2-213ENST00000554600 J3QRK9 145 aa8.39□□□□□ -1.07
SHMT2-213ENST00000554600 RBBP9O75884 186 aa8.39□□□□□ -1.07
SHMT2-213ENST00000554600 DTYMKP23919 212 aa8.39□□□□□ -1.07
SHMT2-213ENST00000554600 TGFBR1P36897 503 aa8.39□□□□□ -1.07
SHMT2-213ENST00000554600 LINC00205P59089 165 aa8.39□□□□□ -1.07
SHMT2-213ENST00000554600 PITPNAQ00169 270 aa8.39□□□□□ -1.07
SHMT2-213ENST00000554600 OXLD1Q5BKU9 147 aa8.39□□□□□ -1.07
SHMT2-213ENST00000554600 LIN54Q6MZP7 749 aa8.39□□□□□ -1.07
SHMT2-213ENST00000554600 C18orf65Q6ZTR6 163 aa8.39□□□□□ -1.07
SHMT2-213ENST00000554600 C8orf86Q6ZUL3 223 aa8.39□□□□□ -1.07
SHMT2-213ENST00000554600 CLCC1Q96S66 551 aa8.39□□□□□ -1.07
SHMT2-213ENST00000554600 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.39□□□□□ -1.07
SHMT2-213ENST00000554600 A3GALT2U3KPV4 340 aa8.39□□□□□ -1.07
SHMT2-213ENST00000554600 IGKV1D-8A0A087WSZ0 117 aa8.38□□□□□ -1.07
SHMT2-213ENST00000554600 RRHO14718 337 aa8.38□□□□□ -1.07
SHMT2-213ENST00000554600 ATP6V0E1O15342 81 aa8.38□□□□□ -1.07
SHMT2-213ENST00000554600 HLA-DRB1P01911 266 aa8.38□□□□□ -1.07
SHMT2-213ENST00000554600 RPLP1P05386 114 aaKnown RBP8.38□□□□□ -1.07
SHMT2-213ENST00000554600 OR5H8P0DN80 308 aa8.38□□□□□ -1.07
SHMT2-213ENST00000554600 SCAND1P57086 179 aa8.38□□□□□ -1.07
SHMT2-213ENST00000554600 CBX3Q13185 183 aa8.38□□□□□ -1.07
SHMT2-213ENST00000554600 ECSCRQ19T08 205 aa8.38□□□□□ -1.07
SHMT2-213ENST00000554600 PDLIM3Q53GG5 364 aaPredicted RBP8.38□□□□□ -1.07
SHMT2-213ENST00000554600 ZNF695Q8IW36 515 aa8.38□□□□□ -1.07
SHMT2-213ENST00000554600 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.38□□□□□ -1.07
SHMT2-213ENST00000554600 NPBQ8NG41 125 aa8.38□□□□□ -1.07
SHMT2-213ENST00000554600 OR5AN1Q8NGI8 311 aa8.38□□□□□ -1.07
SHMT2-213ENST00000554600 YIPF6Q96EC8 236 aa8.38□□□□□ -1.07
SHMT2-213ENST00000554600 TSNAXQ99598 290 aaKnown RBP8.38□□□□□ -1.07
SHMT2-213ENST00000554600 OR51J1Q9H342 316 aa8.38□□□□□ -1.07
SHMT2-213ENST00000554600 DIABLOQ9NR28 239 aa8.38□□□□□ -1.07
SHMT2-213ENST00000554600 SLC35D1Q9NTN3 355 aa8.38□□□□□ -1.07
SHMT2-213ENST00000554600 ZFP57Q9NU63 452 aa8.38□□□□□ -1.07
SHMT2-213ENST00000554600 METTL1Q9UBP6 276 aaKnown RBP8.38□□□□□ -1.07
SHMT2-213ENST00000554600 SORL1Q92673 2214 aa8.37□□□□□ -1.07
SHMT2-213ENST00000554600 PRKDCP78527 4128 aaKnown RBP8.37□□□□□ -1.07
SHMT2-213ENST00000554600 IGHV7-81A0A0B4J1V7 117 aa8.37□□□□□ -1.07
SHMT2-213ENST00000554600 TRAV41A0A0B4J266 112 aa8.37□□□□□ -1.07
SHMT2-213ENST00000554600 G3V318 75 aa8.37□□□□□ -1.07
SHMT2-213ENST00000554600 PROP1O75360 226 aa8.37□□□□□ -1.07
SHMT2-213ENST00000554600 NDUFA3O95167 84 aa8.37□□□□□ -1.07
SHMT2-213ENST00000554600 DIRAS3O95661 229 aa8.37□□□□□ -1.07
SHMT2-213ENST00000554600 PRB2P02812 416 aaPredicted RBP8.37□□□□□ -1.07
SHMT2-213ENST00000554600 FCER2P06734 321 aa8.37□□□□□ -1.07
SHMT2-213ENST00000554600 ELANEP08246 267 aa8.37□□□□□ -1.07
SHMT2-213ENST00000554600 CTXN2P0C2S0 81 aa8.37□□□□□ -1.07
SHMT2-213ENST00000554600 IGLL1P15814 213 aa8.37□□□□□ -1.07
SHMT2-213ENST00000554600 RAB25P57735 213 aa8.37□□□□□ -1.07
SHMT2-213ENST00000554600 ARPC4P59998 168 aa8.37□□□□□ -1.07
SHMT2-213ENST00000554600 FOXE3Q13461 319 aa8.37□□□□□ -1.07
SHMT2-213ENST00000554600 SRSF7Q16629 238 aaKnown RBP eCLIP8.37□□□□□ -1.07
SHMT2-213ENST00000554600 BEAN1Q3B7T3 259 aa8.37□□□□□ -1.07
SHMT2-213ENST00000554600 ZNF260Q3ZCT1 412 aa8.37□□□□□ -1.07
SHMT2-213ENST00000554600 SAMD5Q5TGI4 173 aa8.37□□□□□ -1.07
SHMT2-213ENST00000554600 TMEM65Q6PI78 240 aa8.37□□□□□ -1.07
SHMT2-213ENST00000554600 Q6ZS49 121 aa8.37□□□□□ -1.07
SHMT2-213ENST00000554600 CROCCP3Q8IVE0 287 aa8.37□□□□□ -1.07
SHMT2-213ENST00000554600 H1FOOQ8IZA3 346 aaPredicted RBP8.37□□□□□ -1.07
SHMT2-213ENST00000554600 ZNF383Q8NA42 475 aa8.37□□□□□ -1.07
SHMT2-213ENST00000554600 FLYWCH2Q96CP2 140 aaKnown RBP8.37□□□□□ -1.07
SHMT2-213ENST00000554600 SLC25A38Q96DW6 304 aa8.37□□□□□ -1.07
SHMT2-213ENST00000554600 DCSTAMPQ9H295 470 aa8.37□□□□□ -1.07
SHMT2-213ENST00000554600 SDHAF2Q9NX18 166 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms