RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 TRAM1Q15629 374 aa14.53□□□□□ -0.08
CPSF2-203ENST00000554290 CD200R1LQ6Q8B3 271 aa14.53□□□□□ -0.08
CPSF2-203ENST00000554290 PPP1R27Q86WC6 154 aa14.53□□□□□ -0.08
CPSF2-203ENST00000554290 DLX4Q92988 240 aaPredicted RBP14.53□□□□□ -0.08
CPSF2-203ENST00000554290 ASCL2Q99929 193 aa14.53□□□□□ -0.08
CPSF2-203ENST00000554290 HDHD3Q9BSH5 251 aaPredicted RBP14.53□□□□□ -0.08
CPSF2-203ENST00000554290 TOLLIPQ9H0E2 274 aa14.53□□□□□ -0.08
CPSF2-203ENST00000554290 C11orf54Q9H0W9 315 aaPredicted RBP14.53□□□□□ -0.08
CPSF2-203ENST00000554290 ALX4Q9H161 411 aaPredicted RBP14.53□□□□□ -0.08
CPSF2-203ENST00000554290 ISYNA1Q9NPH2 558 aa14.53□□□□□ -0.08
CPSF2-203ENST00000554290 C12orf4Q9NQ89 552 aa14.53□□□□□ -0.08
CPSF2-203ENST00000554290 OR1A1Q9P1Q5 309 aa14.53□□□□□ -0.08
CPSF2-203ENST00000554290 ZNF221Q9UK13 617 aa14.53□□□□□ -0.08
CPSF2-203ENST00000554290 TPRKBQ9Y3C4 175 aa14.53□□□□□ -0.08
CPSF2-203ENST00000554290 LGALS1P09382 135 aaKnown RBP14.52□□□□□ -0.09
CPSF2-203ENST00000554290 CPEP16870 476 aa14.52□□□□□ -0.09
CPSF2-203ENST00000554290 RAB11BQ15907 218 aa14.52□□□□□ -0.09
CPSF2-203ENST00000554290 AKIRIN2Q53H80 203 aa14.52□□□□□ -0.09
CPSF2-203ENST00000554290 ACTBL2Q562R1 376 aa14.52□□□□□ -0.09
CPSF2-203ENST00000554290 UNQ5815/PRO19632Q6UWF5 114 aa14.52□□□□□ -0.09
CPSF2-203ENST00000554290 ZNF562Q6V9R5 426 aa14.52□□□□□ -0.09
CPSF2-203ENST00000554290 PTX4Q96A99 478 aa14.52□□□□□ -0.09
CPSF2-203ENST00000554290 CLCC1Q96S66 551 aa14.52□□□□□ -0.09
CPSF2-203ENST00000554290 TSNAXQ99598 290 aaKnown RBP14.52□□□□□ -0.09
CPSF2-203ENST00000554290 Q9N2K0 584 aa14.52□□□□□ -0.09
CPSF2-203ENST00000554290 METTL1Q9UBP6 276 aaKnown RBP14.52□□□□□ -0.09
CPSF2-203ENST00000554290 SCTP09683 121 aa14.51□□□□□ -0.09
CPSF2-203ENST00000554290 HSMCR30P0CW71 290 aa14.51□□□□□ -0.09
CPSF2-203ENST00000554290 EGR2P11161 476 aaPredicted RBP14.51□□□□□ -0.09
CPSF2-203ENST00000554290 PSMA1P25786 263 aaKnown RBP14.51□□□□□ -0.09
CPSF2-203ENST00000554290 TPBGQ13641 420 aa14.51□□□□□ -0.09
CPSF2-203ENST00000554290 IRF3Q14653 427 aa14.51□□□□□ -0.09
CPSF2-203ENST00000554290 PSG5Q15238 335 aa14.51□□□□□ -0.09
CPSF2-203ENST00000554290 CASTOR1Q8WTX7 329 aa14.51□□□□□ -0.09
CPSF2-203ENST00000554290 FLYWCH2Q96CP2 140 aaKnown RBP14.51□□□□□ -0.09
CPSF2-203ENST00000554290 CMSS1Q9BQ75 279 aaKnown RBP14.51□□□□□ -0.09
CPSF2-203ENST00000554290 SLA2Q9H6Q3 261 aa14.51□□□□□ -0.09
CPSF2-203ENST00000554290 ARPC1BO15143 372 aaKnown RBP14.5□□□□□ -0.09
CPSF2-203ENST00000554290 TFAP2AP05549 437 aa14.5□□□□□ -0.09
CPSF2-203ENST00000554290 VEGFCP49767 419 aa14.5□□□□□ -0.09
CPSF2-203ENST00000554290 SLURP1P55000 103 aa14.5□□□□□ -0.09
CPSF2-203ENST00000554290 RPS16P62249 146 aaKnown RBP14.5□□□□□ -0.09
CPSF2-203ENST00000554290 TMEM91Q6ZNR0 172 aa14.5□□□□□ -0.09
CPSF2-203ENST00000554290 DRAXINQ8NBI3 349 aaPredicted RBP14.5□□□□□ -0.09
CPSF2-203ENST00000554290 OR56B1Q8NGI3 324 aa14.5□□□□□ -0.09
CPSF2-203ENST00000554290 GFI1Q99684 422 aa14.5□□□□□ -0.09
CPSF2-203ENST00000554290 PECRQ9BY49 303 aa14.5□□□□□ -0.09
CPSF2-203ENST00000554290 GAB2Q9UQC2 676 aa14.5□□□□□ -0.09
CPSF2-203ENST00000554290 AK6Q9Y3D8 172 aaKnown RBP14.5□□□□□ -0.09
CPSF2-203ENST00000554290 IGHV4OR15-8A0A075B7B6 117 aa14.49□□□□□ -0.09
CPSF2-203ENST00000554290 A0A087WW49 117 aa14.49□□□□□ -0.09
CPSF2-203ENST00000554290 FOXI3A8MTJ6 420 aaPredicted RBP14.49□□□□□ -0.09
CPSF2-203ENST00000554290 TRDCB7Z8K6 153 aa14.49□□□□□ -0.09
CPSF2-203ENST00000554290 SPDEFO95238 335 aa14.49□□□□□ -0.09
CPSF2-203ENST00000554290 APOA2P02652 100 aa14.49□□□□□ -0.09
CPSF2-203ENST00000554290 HSPB1P04792 205 aaKnown RBP14.49□□□□□ -0.09
CPSF2-203ENST00000554290 TMEM50BP56557 158 aa14.49□□□□□ -0.09
CPSF2-203ENST00000554290 RPS25P62851 125 aaKnown RBP14.49□□□□□ -0.09
CPSF2-203ENST00000554290 MRPS15P82914 257 aaKnown RBP14.49□□□□□ -0.09
CPSF2-203ENST00000554290 ACSM6Q6P461 480 aa14.49□□□□□ -0.09
CPSF2-203ENST00000554290 PDPNQ86YL7 162 aa14.49□□□□□ -0.09
CPSF2-203ENST00000554290 LFNGQ8NES3 379 aa14.49□□□□□ -0.09
CPSF2-203ENST00000554290 OR6Q1Q8NGQ2 317 aa14.49□□□□□ -0.09
CPSF2-203ENST00000554290 ARHGAP5-AS1Q96IT6 56 aa14.49□□□□□ -0.09
CPSF2-203ENST00000554290 MS4A10Q96PG2 267 aa14.49□□□□□ -0.09
CPSF2-203ENST00000554290 OR4C12Q96R67 309 aa14.49□□□□□ -0.09
CPSF2-203ENST00000554290 FAM103A1Q9BTL3 118 aaKnown RBP14.49□□□□□ -0.09
CPSF2-203ENST00000554290 TPSG1Q9NRR2 321 aa14.49□□□□□ -0.09
CPSF2-203ENST00000554290 RGS10O43665 173 aa14.48□□□□□ -0.09
CPSF2-203ENST00000554290 PROP1O75360 226 aa14.48□□□□□ -0.09
CPSF2-203ENST00000554290 CA2P00918 260 aa14.48□□□□□ -0.09
CPSF2-203ENST00000554290 OR8U9P0C7N5 309 aa14.48□□□□□ -0.09
CPSF2-203ENST00000554290 SERPINB10P48595 397 aa14.48□□□□□ -0.09
CPSF2-203ENST00000554290 PSMD7P51665 324 aa14.48□□□□□ -0.09
CPSF2-203ENST00000554290 TPPP2P59282 170 aa14.48□□□□□ -0.09
CPSF2-203ENST00000554290 PITPNAQ00169 270 aa14.48□□□□□ -0.09
CPSF2-203ENST00000554290 C2orf76Q3KRA6 126 aa14.48□□□□□ -0.09
CPSF2-203ENST00000554290 ZNF383Q8NA42 475 aa14.48□□□□□ -0.09
CPSF2-203ENST00000554290 ARPC1AQ92747 370 aa14.48□□□□□ -0.09
CPSF2-203ENST00000554290 FAM3DQ96BQ1 224 aa14.48□□□□□ -0.09
CPSF2-203ENST00000554290 DUSP21Q9H596 190 aa14.48□□□□□ -0.09
CPSF2-203ENST00000554290 RDH8Q9NYR8 311 aa14.48□□□□□ -0.09
CPSF2-203ENST00000554290 C3orf84H3BNL1 204 aa14.47□□□□□ -0.09
CPSF2-203ENST00000554290 DENRO43583 198 aaKnown RBP14.47□□□□□ -0.09
CPSF2-203ENST00000554290 IGHV3-11P01762 117 aa14.47□□□□□ -0.09
CPSF2-203ENST00000554290 TRGV3P03979 118 aa14.47□□□□□ -0.09
CPSF2-203ENST00000554290 IGKV1-16P04430 117 aa14.47□□□□□ -0.09
CPSF2-203ENST00000554290 SPNP16150 400 aa14.47□□□□□ -0.09
CPSF2-203ENST00000554290 CALRP27797 417 aaKnown RBP14.47□□□□□ -0.09
CPSF2-203ENST00000554290 CLDN12P56749 244 aa14.47□□□□□ -0.09
CPSF2-203ENST00000554290 MLLT11Q13015 90 aaPredicted RBP14.47□□□□□ -0.09
CPSF2-203ENST00000554290 FXYD3Q14802 87 aa14.47□□□□□ -0.09
CPSF2-203ENST00000554290 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.47□□□□□ -0.09
CPSF2-203ENST00000554290 RHOVQ96L33 236 aa14.47□□□□□ -0.09
CPSF2-203ENST00000554290 CCDC90BQ9GZT6 254 aa14.47□□□□□ -0.09
CPSF2-203ENST00000554290 ACOT13Q9NPJ3 140 aa14.47□□□□□ -0.09
CPSF2-203ENST00000554290 V9GY05 133 aa14.47□□□□□ -0.09
CPSF2-203ENST00000554290 DNAH9Q9NYC9 4486 aa14.47□□□□□ -0.09
CPSF2-203ENST00000554290 IGKV1-6A0A0C4DH72 117 aa14.46□□□□□ -0.09
CPSF2-203ENST00000554290 ERICH4A6NGS2 130 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms