RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 LIN7CQ9NUP9 197 aaKnown RBP8.55□□□□□ -1.04
TMEM55B-205ENST00000554028 SDHAF2Q9NX18 166 aa8.55□□□□□ -1.04
TMEM55B-205ENST00000554028 AUP1Q9Y679 476 aa8.55□□□□□ -1.04
TMEM55B-205ENST00000554028 AKAP6Q13023 2319 aa8.55□□□□□ -1.04
TMEM55B-205ENST00000554028 A0A0B4J2A0 478 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 LOC100996750A0A140TA64 210 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 A0A1B0GVG6 124 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 SLC31A2O15432 143 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 ATG12O94817 140 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 TGFAP01135 160 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 ARG1P05089 322 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 F2RP25116 425 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 HTR1DP28221 377 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 KIR2DS2P43631 304 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 THBS3P49746 956 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 BCAP31P51572 246 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 TAGLNQ01995 201 aaKnown RBP8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 PAX8Q06710 450 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 HLA-DRB5Q30154 266 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 CYB5R2Q6BCY4 276 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 FAM71F2Q6NXP2 309 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 LDLRAD3Q86YD5 345 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 LGI3Q8N145 548 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 OR11H6Q8NGC7 330 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 OR52B4Q8NGK2 314 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 OR51H1Q8NH63 302 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 MITD1Q8WV92 249 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 TMEM230Q96A57 120 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 KRTAP4-6Q9BYQ5 205 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 SIRPDQ9H106 197 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 IFI27L2Q9H2X8 130 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 C7orf69Q9H7B7 122 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 HIF1ANQ9NWT6 349 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 SHPKQ9UHJ6 478 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 ITGB1BP2Q9UKP3 347 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 SPG11Q96JI7 2443 aa8.54□□□□□ -1.04
TMEM55B-205ENST00000554028 A0A096LNT2 108 aa8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 SAA2-SAA4A0A096LPE2 208 aa8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 HMX3A6NHT5 357 aa8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 LEUTXA8MZ59 168 aa8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 H0Y980 276 aa8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 BUB1B-PAK6H3BSN5 160 aa8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 J3QLI3 93 aa8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 TXNL1O43396 289 aa8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 PFDN1O60925 122 aa8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 IFNA21P01568 189 aa8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 GAPDHP04406 335 aaKnown RBP8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 OR5AC1P0C628 307 aa8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 SAA2P0DJI9 122 aaPredicted RBP8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 UBE2E1P51965 193 aa8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 ARHGDIBP52566 201 aa8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 RRAS2P62070 204 aaPredicted RBP8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 TMEM249Q2WGJ8 235 aa8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 SP6Q3SY56 376 aa8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 RPL39P5Q59GN2 51 aa8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 TGIF2LXQ8IUE1 241 aa8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 ZNF695Q8IW36 515 aa8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 WFDC11Q8NEX6 87 aa8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 LHX4Q969G2 390 aa8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 RPEQ96AT9 228 aa8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 TMEM222Q9H0R3 208 aa8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 DPM3Q9P2X0 92 aa8.53□□□□□ -1.04
TMEM55B-205ENST00000554028 MALRD1Q5VYJ5 2156 aa8.52□□□□□ -1.04
TMEM55B-205ENST00000554028 PTPN13Q12923 2485 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 A0A0B4J293 547 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 IGLV1-47P01700 117 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 IGLV2-14P01704 120 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 APOA2P02652 100 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 TRAPPC2P0DI81 140 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 TRAPPC2BP0DI82 140 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 IGHV4-31P0DP07 118 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 RRASP10301 218 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 MMP9P14780 707 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 RPA2P15927 270 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 DUTP33316 252 aaKnown RBP8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 ZNF137PP52743 207 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 SUPT4H1P63272 117 aaKnown RBP8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 TMEM187Q14656 261 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 RTL8BQ17RB0 113 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 MINOS1Q5TGZ0 78 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 GPR157Q5UAW9 335 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 CCDC144NLQ6NUI1 221 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 LIAT1Q6ZQX7 453 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 ZNF833PQ6ZTB9 187 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 KRTAP1-3Q8IUG1 177 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 SPAG16Q8N0X2 631 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 CADM3Q8N126 398 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 TEX29Q8N6K0 151 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 IL22RA2Q969J5 263 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 MSI2Q96DH6 328 aaKnown RBP8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 TP53RKQ96S44 253 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 AIFM2Q9BRQ8 373 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 FAM212BQ9NTI7 297 aaPredicted RBP8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 TBL2Q9Y4P3 447 aaKnown RBP8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 MINOS1-NBL1R4GNA1 71 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 ARID1AO14497 2285 aa8.52□□□□□ -1.05
TMEM55B-205ENST00000554028 CRYBG3Q68DQ2 2970 aa8.51□□□□□ -1.05
TMEM55B-205ENST00000554028 OOSP1A8MZH6 123 aa8.51□□□□□ -1.05
TMEM55B-205ENST00000554028 RNASEK-C17orf49H0YIS7 233 aa8.51□□□□□ -1.05
TMEM55B-205ENST00000554028 HOXB4P17483 251 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms