RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 MOGAT2Q3SYC2 334 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 ABCA11PQ4W5N1 156 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 HACD4Q5VWC8 232 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 FAM71F2Q6NXP2 309 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 MZT2AQ6P582 158 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 CCBE1Q6UXH8 406 aaPredicted RBP6.67□□□□□ -1.34
PSEN1-209ENST00000553855 NR2C2APQ86WQ0 139 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 ZNF439Q8NDP4 499 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 OR8H1Q8NGG4 311 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 OR13F1Q8NGS4 319 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 ACOT12Q8WYK0 555 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 RASL11BQ9BPW5 248 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 ST6GALNAC5Q9BVH7 336 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 DCSTAMPQ9H295 470 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 KIAA1456Q9P272 454 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 SPATA2Q9UM82 520 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 IGHV3-72A0A0B4J1Y9 119 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 FAM90A9PA6NNJ1 464 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 SLC31A2O15432 143 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 DIRAS3O95661 229 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 APOA2P02652 100 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 MALP21145 153 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 MC5RP33032 325 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 SOX6P35712 828 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 RPS19P39019 145 aaKnown RBP6.66□□□□□ -1.34
PSEN1-209ENST00000553855 CBX5P45973 191 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 RORCP51449 518 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 ZNF134P52741 427 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 ZNF137PP52743 207 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 ARPC4P59998 168 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 VBP1P61758 197 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 PLA2G7Q13093 441 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 DIAPH2-AS1Q14236 149 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 SRSF7Q16629 238 aaKnown RBP eCLIP6.66□□□□□ -1.34
PSEN1-209ENST00000553855 FAM209BQ5JX69 171 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 UBE2NLQ5JXB2 153 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 UTF1Q5T230 341 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 GPR107Q5VW38 600 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 CENPVQ7Z7K6 275 aaPredicted RBP6.66□□□□□ -1.34
PSEN1-209ENST00000553855 ANKRD13BQ86YJ7 626 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 FOXRED2Q8IWF2 684 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 IZUMO1Q8IYV9 350 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 KLHDC1Q8N7A1 406 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 CFHR4Q92496 578 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 ZNF251Q9BRH9 671 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 ZNF702PQ9H963 129 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.66□□□□□ -1.34
PSEN1-209ENST00000553855 SIGLEC9Q9Y336 463 aa6.66□□□□□ -1.34
PSEN1-209ENST00000553855 SAA2-SAA4A0A096LPE2 208 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 TMEM235A6NFC5 223 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 H7C2Y5 167 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 KCNAB3O43448 404 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 AMY1AP04745 511 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 SAA2P0DJI9 122 aaPredicted RBP6.65□□□□□ -1.34
PSEN1-209ENST00000553855 BLCAPP62952 87 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 SLC35B1P78383 322 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 PLGLAQ15195 96 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 MMDQ15546 238 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 C2orf68Q2NKX9 166 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 TMEM69Q5SWH9 247 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 FAM53AQ6NSI3 398 aaPredicted RBP6.65□□□□□ -1.34
PSEN1-209ENST00000553855 Q6ZS49 121 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 Q8N2B8 174 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 SAMD12Q8N8I0 201 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 LINC00482Q8N8I6 264 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 OR4X2Q8NGF9 303 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 OR5H6Q8NGV6 325 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 MAFIPQ8WZ33 124 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 ST6GALNAC6Q969X2 333 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 SLC25A46Q96AG3 418 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 CITED1Q99966 193 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 GON7Q9BXV9 100 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 C11orf54Q9H0W9 315 aaPredicted RBP6.65□□□□□ -1.34
PSEN1-209ENST00000553855 IFT46Q9NQC8 304 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 RDH8Q9NYR8 311 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 OR1A1Q9P1Q5 309 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 COMMD3Q9UBI1 195 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 ZNF230Q9UIE0 474 aaPredicted RBP6.65□□□□□ -1.34
PSEN1-209ENST00000553855 KCNK7Q9Y2U2 307 aa6.65□□□□□ -1.34
PSEN1-209ENST00000553855 DSCAML1Q8TD84 2053 aa6.65□□□□□ -1.35
PSEN1-209ENST00000553855 KIAA2026Q5HYC2 2103 aa6.65□□□□□ -1.35
PSEN1-209ENST00000553855 STAB1Q9NY15 2570 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 OR5H14A6NHG9 310 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 FAM25AB3EWG3 89 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 FAM25CB3EWG5 89 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 FAM25GB3EWG6 89 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 RBBP9O75884 186 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 SLC22A5O76082 557 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 GABARAPO95166 117 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 OPN1MWP04001 364 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 TFAP2AP05549 437 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 CSF1P09603 554 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 OR8U9P0C7N5 309 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 GSTT2P0CG29 244 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 GSTT2BP0CG30 244 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 SMIM18P0DKX4 95 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 OPN1MW2P0DN77 364 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 OPN1MW3P0DN78 364 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 TGFBR1P36897 503 aa6.64□□□□□ -1.35
PSEN1-209ENST00000553855 OR3A3P47888 321 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms