RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 A6NLC8 198 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 NXPH3O95157 252 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 CLDN14O95500 239 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 CGAP01215 116 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 TAGLN2P37802 199 aaKnown RBP10.82□□□□□ -0.68
SHMT2-205ENST00000553474 CCL20P78556 96 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 TMEM267Q0VDI3 215 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-205ENST00000553474 PNRC1Q12796 327 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-205ENST00000553474 ICAM4Q14773 271 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 IGFL3Q6UXB1 125 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 CENPVQ7Z7K6 275 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-205ENST00000553474 PPP1R35Q8TAP8 253 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 NIPSNAP3BQ9BS92 247 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 ABHD14AQ9BUJ0 271 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 WDR61Q9GZS3 305 aaKnown RBP10.82□□□□□ -0.68
SHMT2-205ENST00000553474 INTS1Q8N201 2190 aaKnown RBP10.82□□□□□ -0.68
SHMT2-205ENST00000553474 FAM90A9PA6NNJ1 464 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 H3BP45 60 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 MKRN2OSH3BPM6 223 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 RAB29O14966 203 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 SPINT2O43291 252 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 TNFSF13O75888 250 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 IFNA1P01562 189 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 FAM87AP0C7U9 286 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 METTL15P1P0C7V9 234 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 RAB5AP20339 215 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 GZMHP20718 246 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 GABRA2P47869 451 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 HABP2Q14520 560 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-205ENST00000553474 AKIRIN2Q53H80 203 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 KRBOX4Q5JUW0 171 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 BHLHA15Q7RTS1 189 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-205ENST00000553474 ZADH2Q8N4Q0 377 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 OR1L1Q8NH94 360 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 TVP23CQ96ET8 276 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 COQ2Q96H96 371 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 MRPL37Q9BZE1 423 aaKnown RBP10.82□□□□□ -0.68
SHMT2-205ENST00000553474 NCOR1P1Q9H4R4 102 aa10.82□□□□□ -0.68
SHMT2-205ENST00000553474 CISD1Q9NZ45 108 aaKnown RBP10.82□□□□□ -0.68
SHMT2-205ENST00000553474 LOC102723971A0A1B0GUV8 181 aa10.81□□□□□ -0.68
SHMT2-205ENST00000553474 LRRC30A6NM36 301 aa10.81□□□□□ -0.68
SHMT2-205ENST00000553474 H3BQ15 152 aa10.81□□□□□ -0.68
SHMT2-205ENST00000553474 SOX15O60248 233 aa10.81□□□□□ -0.68
SHMT2-205ENST00000553474 MBP02144 154 aa10.81□□□□□ -0.68
SHMT2-205ENST00000553474 AESQ08117 197 aa10.81□□□□□ -0.68
SHMT2-205ENST00000553474 TMEM41BQ5BJD5 291 aa10.81□□□□□ -0.68
SHMT2-205ENST00000553474 ETV3LQ6ZN32 361 aa10.81□□□□□ -0.68
SHMT2-205ENST00000553474 CXorf67Q86X51 503 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-205ENST00000553474 RAB9BQ9NP90 201 aa10.81□□□□□ -0.68
SHMT2-205ENST00000553474 RPRMQ9NS64 109 aa10.81□□□□□ -0.68
SHMT2-205ENST00000553474 CHD3Q12873 2000 aaKnown RBP10.81□□□□□ -0.68
SHMT2-205ENST00000553474 USF3Q68DE3 2245 aa10.81□□□□□ -0.68
SHMT2-205ENST00000553474 ITPR1Q14643 2758 aa10.81□□□□□ -0.68
SHMT2-205ENST00000553474 GTF3C1Q12789 2109 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 IGHV1-18A0A0C4DH31 117 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 AGFG2O95081 481 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 S100A8P05109 93 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 IAPPP10997 89 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 COL10A1Q03692 680 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 SLC38A11Q08AI6 406 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 HAGHQ16775 308 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 CR1LQ2VPA4 569 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 Q6ZR03 302 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 ZNF429Q86V71 674 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 TAF15Q92804 592 aaKnown RBP eCLIP10.8□□□□□ -0.68
SHMT2-205ENST00000553474 STARD4Q96DR4 205 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 PRORYQ9H606 182 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 PUS1Q9Y606 427 aaKnown RBP eCLIP10.8□□□□□ -0.68
SHMT2-205ENST00000553474 SLC25A15Q9Y619 301 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 HEATR1Q9H583 2144 aaKnown RBP10.8□□□□□ -0.68
SHMT2-205ENST00000553474 A0A1B0GV50 99 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 TMEM238LA0A1B0GVL6 79 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 C5orf52A6NGY3 159 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 SRRM5B3KS81 715 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 UBE2CO00762 179 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 WNT9BO14905 357 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 OR2C1O95371 312 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 CLDN1O95832 211 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 BCL2P10415 239 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 FABP6P51161 128 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 IZUMO4Q1ZYL8 232 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 SPANXN5Q5MJ07 72 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 TIMM23BQ5SRD1 257 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 ZNF787Q6DD87 383 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 ZNF826PQ6ZT77 177 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 MRGPRGQ86SM5 289 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 ZNF610Q8N9Z0 462 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 ABHD17AQ96GS6 310 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 TCEAL7Q9BRU2 100 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 C20orf24Q9BUV8 137 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 TMEM147Q9BVK8 224 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 RBKSQ9H477 322 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 TMEM242Q9NWH2 141 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 JPT1Q9UK76 154 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 TP53TG5Q9Y2B4 290 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 RFNGQ9Y644 331 aa10.8□□□□□ -0.68
SHMT2-205ENST00000553474 CACNA1DQ01668 2161 aa10.79□□□□□ -0.68
SHMT2-205ENST00000553474 EPG5Q9HCE0 2579 aa10.79□□□□□ -0.68
SHMT2-205ENST00000553474 ATMQ13315 3056 aa10.79□□□□□ -0.68
SHMT2-205ENST00000553474 ZNF98A6NK75 572 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms