RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 ENSAO43768 121 aaKnown RBP14.38□□□□□ -0.11
PSEN1-206ENST00000553447 IFNA21P01568 189 aa14.38□□□□□ -0.11
PSEN1-206ENST00000553447 SAA2P0DJI9 122 aaPredicted RBP14.38□□□□□ -0.11
PSEN1-206ENST00000553447 RPL39P5Q59GN2 51 aa14.38□□□□□ -0.11
PSEN1-206ENST00000553447 GGNBP1Q5YKI7 109 aa14.38□□□□□ -0.11
PSEN1-206ENST00000553447 HIST2H2BCQ6DN03 193 aa14.38□□□□□ -0.11
PSEN1-206ENST00000553447 ZNF695Q8IW36 515 aa14.38□□□□□ -0.11
PSEN1-206ENST00000553447 OR2T35Q8NGX2 323 aa14.38□□□□□ -0.11
PSEN1-206ENST00000553447 OR9G1Q8NH87 305 aa14.38□□□□□ -0.11
PSEN1-206ENST00000553447 TCTEX1D2Q8WW35 142 aa14.38□□□□□ -0.11
PSEN1-206ENST00000553447 IL22RA2Q969J5 263 aa14.38□□□□□ -0.11
PSEN1-206ENST00000553447 SEC22AQ96IW7 307 aa14.38□□□□□ -0.11
PSEN1-206ENST00000553447 UTP20O75691 2785 aaKnown RBP14.37□□□□□ -0.11
PSEN1-206ENST00000553447 IGHV4-61A0A0C4DH41 118 aa14.37□□□□□ -0.11
PSEN1-206ENST00000553447 DUXBA0A1W2PPF3 345 aa14.37□□□□□ -0.11
PSEN1-206ENST00000553447 MPTX1A8MV57 137 aa14.37□□□□□ -0.11
PSEN1-206ENST00000553447 G3V3Q6 166 aa14.37□□□□□ -0.11
PSEN1-206ENST00000553447 J3QR06 171 aa14.37□□□□□ -0.11
PSEN1-206ENST00000553447 SERPINE2P07093 398 aa14.37□□□□□ -0.11
PSEN1-206ENST00000553447 DNASE1P24855 282 aa14.37□□□□□ -0.11
PSEN1-206ENST00000553447 DUTP33316 252 aaKnown RBP14.37□□□□□ -0.11
PSEN1-206ENST00000553447 C1orf229Q6ZS94 237 aaPredicted RBP14.37□□□□□ -0.11
PSEN1-206ENST00000553447 LYZL2Q7Z4W2 148 aa14.37□□□□□ -0.11
PSEN1-206ENST00000553447 NOXA1Q86UR1 476 aa14.37□□□□□ -0.11
PSEN1-206ENST00000553447 ABHD12Q8N2K0 398 aa14.37□□□□□ -0.11
PSEN1-206ENST00000553447 TCTEX1D1Q8N7M0 179 aa14.37□□□□□ -0.11
PSEN1-206ENST00000553447 Q8N7P7 452 aa14.37□□□□□ -0.11
PSEN1-206ENST00000553447 SLC35G3Q8N808 338 aa14.37□□□□□ -0.11
PSEN1-206ENST00000553447 OR10C1Q96KK4 312 aa14.37□□□□□ -0.11
PSEN1-206ENST00000553447 ZNF251Q9BRH9 671 aa14.37□□□□□ -0.11
PSEN1-206ENST00000553447 ZNRD1Q9P1U0 126 aa14.37□□□□□ -0.11
PSEN1-206ENST00000553447 ARID1AO14497 2285 aa14.36□□□□□ -0.11
PSEN1-206ENST00000553447 PIGBOS1A0A0B4J2F0 54 aa14.36□□□□□ -0.11
PSEN1-206ENST00000553447 LINC00473A8K010 186 aa14.36□□□□□ -0.11
PSEN1-206ENST00000553447 FOXH1O75593 365 aa14.36□□□□□ -0.11
PSEN1-206ENST00000553447 GZMKP49863 264 aa14.36□□□□□ -0.11
PSEN1-206ENST00000553447 ARF6P62330 175 aa14.36□□□□□ -0.11
PSEN1-206ENST00000553447 LCN2P80188 198 aa14.36□□□□□ -0.11
PSEN1-206ENST00000553447 PAX2Q02962 417 aa14.36□□□□□ -0.11
PSEN1-206ENST00000553447 CLEC12BQ2HXU8 276 aa14.36□□□□□ -0.11
PSEN1-206ENST00000553447 DEFB113Q30KQ7 82 aa14.36□□□□□ -0.11
PSEN1-206ENST00000553447 ZNF585BQ52M93 769 aa14.36□□□□□ -0.11
PSEN1-206ENST00000553447 KIR3DL3Q8N743 410 aa14.36□□□□□ -0.11
PSEN1-206ENST00000553447 TNFRSF14Q92956 283 aa14.36□□□□□ -0.11
PSEN1-206ENST00000553447 RBPMSQ93062 196 aaKnown RBP14.36□□□□□ -0.11
PSEN1-206ENST00000553447 C2orf50Q96LR7 162 aa14.36□□□□□ -0.11
PSEN1-206ENST00000553447 NMES1Q9C002 83 aa14.36□□□□□ -0.11
PSEN1-206ENST00000553447 RANBP3Q9H6Z4 567 aaPredicted RBP14.36□□□□□ -0.11
PSEN1-206ENST00000553447 FAM212BQ9NTI7 297 aaPredicted RBP14.36□□□□□ -0.11
PSEN1-206ENST00000553447 TMED3Q9Y3Q3 217 aa14.36□□□□□ -0.11
PSEN1-206ENST00000553447 USP9YO00507 2555 aaPredicted RBP14.36□□□□□ -0.11
PSEN1-206ENST00000553447 IGHV2-26A0A0B4J1V2 119 aa14.35□□□□□ -0.11
PSEN1-206ENST00000553447 IGHV2-70DA0A0C4DH43 119 aa14.35□□□□□ -0.11
PSEN1-206ENST00000553447 TOR1AO14656 332 aa14.35□□□□□ -0.11
PSEN1-206ENST00000553447 CYCSP99999 105 aaKnown RBP14.35□□□□□ -0.11
PSEN1-206ENST00000553447 Q5BKY6 102 aa14.35□□□□□ -0.11
PSEN1-206ENST00000553447 OR2B11Q5JQS5 317 aa14.35□□□□□ -0.11
PSEN1-206ENST00000553447 NCR3LG1Q68D85 454 aa14.35□□□□□ -0.11
PSEN1-206ENST00000553447 ZNF833PQ6ZTB9 187 aa14.35□□□□□ -0.11
PSEN1-206ENST00000553447 SPAG16Q8N0X2 631 aa14.35□□□□□ -0.11
PSEN1-206ENST00000553447 LRRC75A-AS1Q8N1F1 130 aa14.35□□□□□ -0.11
PSEN1-206ENST00000553447 S1PR3Q99500 378 aa14.35□□□□□ -0.11
PSEN1-206ENST00000553447 CLEC7AQ9BXN2 247 aa14.35□□□□□ -0.11
PSEN1-206ENST00000553447 FAM157AC9JC47 383 aa14.34□□□□□ -0.11
PSEN1-206ENST00000553447 IGKV1-39P01597 117 aa14.34□□□□□ -0.11
PSEN1-206ENST00000553447 IGKV1D-39P04432 117 aa14.34□□□□□ -0.11
PSEN1-206ENST00000553447 RPA2P15927 270 aa14.34□□□□□ -0.11
PSEN1-206ENST00000553447 SLC25A16P16260 332 aa14.34□□□□□ -0.11
PSEN1-206ENST00000553447 LPAR6P43657 344 aa14.34□□□□□ -0.11
PSEN1-206ENST00000553447 THBS3P49746 956 aa14.34□□□□□ -0.11
PSEN1-206ENST00000553447 NKX2-5P52952 324 aaPredicted RBP14.34□□□□□ -0.11
PSEN1-206ENST00000553447 DLX1P56177 255 aa14.34□□□□□ -0.11
PSEN1-206ENST00000553447 BRWD1-AS2P59051 145 aa14.34□□□□□ -0.11
PSEN1-206ENST00000553447 LINC00205P59089 165 aa14.34□□□□□ -0.11
PSEN1-206ENST00000553447 IAH1Q2TAA2 248 aaPredicted RBP14.34□□□□□ -0.11
PSEN1-206ENST00000553447 C1orf122Q6ZSJ8 110 aa14.34□□□□□ -0.11
PSEN1-206ENST00000553447 DRAXINQ8NBI3 349 aaPredicted RBP14.34□□□□□ -0.11
PSEN1-206ENST00000553447 OR10X1Q8NGY0 326 aa14.34□□□□□ -0.11
PSEN1-206ENST00000553447 DDB2Q92466 427 aa14.34□□□□□ -0.11
PSEN1-206ENST00000553447 ADTRPQ96IZ2 230 aa14.34□□□□□ -0.11
PSEN1-206ENST00000553447 POLR3KQ9Y2Y1 108 aaPredicted RBP14.34□□□□□ -0.11
PSEN1-206ENST00000553447 KPTNQ9Y664 436 aa14.34□□□□□ -0.11
PSEN1-206ENST00000553447 TENM4Q6N022 2769 aa14.34□□□□□ -0.11
PSEN1-206ENST00000553447 RAMP3O60896 148 aa14.33□□□□□ -0.12
PSEN1-206ENST00000553447 VDAC1P21796 283 aa14.33□□□□□ -0.12
PSEN1-206ENST00000553447 PRTN3P24158 256 aa14.33□□□□□ -0.12
PSEN1-206ENST00000553447 COX7A1P24310 79 aa14.33□□□□□ -0.12
PSEN1-206ENST00000553447 ZNF137PP52743 207 aa14.33□□□□□ -0.12
PSEN1-206ENST00000553447 PRRX1P54821 245 aa14.33□□□□□ -0.12
PSEN1-206ENST00000553447 PRB3Q04118 309 aaPredicted RBP14.33□□□□□ -0.12
PSEN1-206ENST00000553447 FAM71F2Q6NXP2 309 aa14.33□□□□□ -0.12
PSEN1-206ENST00000553447 OR13D1Q8NGV5 346 aa14.33□□□□□ -0.12
PSEN1-206ENST00000553447 TMEM186Q96B77 213 aa14.33□□□□□ -0.12
PSEN1-206ENST00000553447 MBD6Q96DN6 1003 aa14.33□□□□□ -0.12
PSEN1-206ENST00000553447 HYLS1Q96M11 299 aa14.33□□□□□ -0.12
PSEN1-206ENST00000553447 MMP26Q9NRE1 261 aa14.33□□□□□ -0.12
PSEN1-206ENST00000553447 COMMD9Q9P000 198 aa14.33□□□□□ -0.12
PSEN1-206ENST00000553447 TRAV14DV4A0A0A6YYC5 116 aa14.32□□□□□ -0.12
PSEN1-206ENST00000553447 IGLV1-47P01700 117 aa14.32□□□□□ -0.12
PSEN1-206ENST00000553447 IL3RAP26951 378 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms