RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 CDNFQ49AH0 187 aa9.3□□□□□ -0.92
CKAP4-202ENST00000552828 TGIF2LXQ8IUE1 241 aa9.3□□□□□ -0.92
CKAP4-202ENST00000552828 FOXRED2Q8IWF2 684 aa9.3□□□□□ -0.92
CKAP4-202ENST00000552828 LINC00311Q8N616 119 aa9.3□□□□□ -0.92
CKAP4-202ENST00000552828 Q8N6K4 173 aa9.3□□□□□ -0.92
CKAP4-202ENST00000552828 C8orf31Q8N9H6 132 aa9.3□□□□□ -0.92
CKAP4-202ENST00000552828 OR5H6Q8NGV6 325 aa9.3□□□□□ -0.92
CKAP4-202ENST00000552828 HDHD3Q9BSH5 251 aaPredicted RBP9.3□□□□□ -0.92
CKAP4-202ENST00000552828 LINC00527Q9UJ94 153 aa9.3□□□□□ -0.92
CKAP4-202ENST00000552828 SPATA2Q9UM82 520 aa9.3□□□□□ -0.92
CKAP4-202ENST00000552828 KCNK7Q9Y2U2 307 aa9.3□□□□□ -0.92
CKAP4-202ENST00000552828 HUWE1Q7Z6Z7 4374 aaKnown RBP9.3□□□□□ -0.92
CKAP4-202ENST00000552828 A0A1W2PPE3 182 aa9.29□□□□□ -0.92
CKAP4-202ENST00000552828 AP4M1O00189 453 aa9.29□□□□□ -0.92
CKAP4-202ENST00000552828 RGS11O94810 467 aa9.29□□□□□ -0.92
CKAP4-202ENST00000552828 IGKV1D-33P01593 117 aa9.29□□□□□ -0.92
CKAP4-202ENST00000552828 IGKV1-33P01594 117 aa9.29□□□□□ -0.92
CKAP4-202ENST00000552828 GPR12P47775 334 aa9.29□□□□□ -0.92
CKAP4-202ENST00000552828 CDX1P47902 265 aaPredicted RBP9.29□□□□□ -0.92
CKAP4-202ENST00000552828 ARFRP1Q13795 201 aa9.29□□□□□ -0.92
CKAP4-202ENST00000552828 PNLIPRP3Q17RR3 467 aa9.29□□□□□ -0.92
CKAP4-202ENST00000552828 STEAP3Q658P3 488 aa9.29□□□□□ -0.92
CKAP4-202ENST00000552828 CENPSQ8N2Z9 138 aa9.29□□□□□ -0.92
CKAP4-202ENST00000552828 OR10V1Q8NGI7 309 aa9.29□□□□□ -0.92
CKAP4-202ENST00000552828 OR6Q1Q8NGQ2 317 aa9.29□□□□□ -0.92
CKAP4-202ENST00000552828 OR8U1Q8NH10 309 aa9.29□□□□□ -0.92
CKAP4-202ENST00000552828 IL1F10Q8WWZ1 152 aa9.29□□□□□ -0.92
CKAP4-202ENST00000552828 KCTD12Q96CX2 325 aaKnown RBP9.29□□□□□ -0.92
CKAP4-202ENST00000552828 GON7Q9BXV9 100 aa9.29□□□□□ -0.92
CKAP4-202ENST00000552828 ABCG5Q9H222 651 aa9.29□□□□□ -0.92
CKAP4-202ENST00000552828 Q9N2K0 584 aa9.29□□□□□ -0.92
CKAP4-202ENST00000552828 DIABLOQ9NR28 239 aa9.29□□□□□ -0.92
CKAP4-202ENST00000552828 JPT1Q9UK76 154 aa9.29□□□□□ -0.92
CKAP4-202ENST00000552828 hCG_2014768A0A024R1R8 64 aa9.28□□□□□ -0.92
CKAP4-202ENST00000552828 A0A0A6YYH2 397 aa9.28□□□□□ -0.92
CKAP4-202ENST00000552828 A6NJ64 397 aa9.28□□□□□ -0.92
CKAP4-202ENST00000552828 TRDCB7Z8K6 153 aa9.28□□□□□ -0.92
CKAP4-202ENST00000552828 C3orf84H3BNL1 204 aa9.28□□□□□ -0.92
CKAP4-202ENST00000552828 YPEL1O60688 119 aa9.28□□□□□ -0.92
CKAP4-202ENST00000552828 GAPDHP04406 335 aaKnown RBP9.28□□□□□ -0.92
CKAP4-202ENST00000552828 RPLP1P05386 114 aaKnown RBP9.28□□□□□ -0.92
CKAP4-202ENST00000552828 GSTP1P09211 210 aaKnown RBP9.28□□□□□ -0.92
CKAP4-202ENST00000552828 IL3RAP26951 378 aa9.28□□□□□ -0.92
CKAP4-202ENST00000552828 RORCP51449 518 aa9.28□□□□□ -0.92
CKAP4-202ENST00000552828 HLA-DRB3P79483 266 aa9.28□□□□□ -0.92
CKAP4-202ENST00000552828 CFHR3Q02985 330 aa9.28□□□□□ -0.92
CKAP4-202ENST00000552828 FOXE3Q13461 319 aa9.28□□□□□ -0.92
CKAP4-202ENST00000552828 MORN2Q502X0 79 aa9.28□□□□□ -0.92
CKAP4-202ENST00000552828 HACD4Q5VWC8 232 aa9.28□□□□□ -0.92
CKAP4-202ENST00000552828 FAM53AQ6NSI3 398 aaPredicted RBP9.28□□□□□ -0.92
CKAP4-202ENST00000552828 C5orf24Q7Z6I8 188 aa9.28□□□□□ -0.92
CKAP4-202ENST00000552828 IZUMO1Q8IYV9 350 aa9.28□□□□□ -0.92
CKAP4-202ENST00000552828 MFSD4AQ8N468 514 aa9.28□□□□□ -0.92
CKAP4-202ENST00000552828 OR52L2PQ8NGH6 319 aa9.28□□□□□ -0.92
CKAP4-202ENST00000552828 SLC25A38Q96DW6 304 aa9.28□□□□□ -0.92
CKAP4-202ENST00000552828 S100A16Q96FQ6 103 aaKnown RBP9.28□□□□□ -0.92
CKAP4-202ENST00000552828 EAF1Q96JC9 268 aaPredicted RBP9.28□□□□□ -0.92
CKAP4-202ENST00000552828 DUX3Q96PT4 197 aa9.28□□□□□ -0.92
CKAP4-202ENST00000552828 YPEL2Q96QA6 119 aa9.28□□□□□ -0.92
CKAP4-202ENST00000552828 DCSTAMPQ9H295 470 aa9.28□□□□□ -0.92
CKAP4-202ENST00000552828 PLSCR3Q9NRY6 295 aa9.28□□□□□ -0.92
CKAP4-202ENST00000552828 LIN7CQ9NUP9 197 aaKnown RBP9.28□□□□□ -0.92
CKAP4-202ENST00000552828 TRAV18A0A075B6X5 111 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 IGHV1-3A0A0C4DH29 117 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 J3QRK9 145 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 HSD17B6O14756 317 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 HSPA12AO43301 675 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 ELANEP08246 267 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 FCGR3AP08637 254 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 SCTP09683 121 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 ZBTB25P24278 435 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 CD40LGP29965 261 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 PPP1CCP36873 323 aaKnown RBP9.27□□□□□ -0.93
CKAP4-202ENST00000552828 BCAP31P51572 246 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 LUMP51884 338 aaPredicted RBP9.27□□□□□ -0.93
CKAP4-202ENST00000552828 ZNF134P52741 427 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 PITPNAQ00169 270 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 FHL3Q13643 280 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 OXA1LQ15070 435 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 CT45A1Q5HYN5 189 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 UBE2NLQ5JXB2 153 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 LY6G6FQ5SQ64 297 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 C9orf66Q5T8R8 295 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 SLC25A48Q6ZT89 311 aaKnown RBP9.27□□□□□ -0.93
CKAP4-202ENST00000552828 SAMD12Q8N8I0 201 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 Q8N9W7 124 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 ZNF439Q8NDP4 499 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 OR5M8Q8NGP6 311 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 CT45A3Q8NHU0 189 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 ACOT12Q8WYK0 555 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 ST6GALNAC6Q969X2 333 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 ZNF580Q9UK33 172 aa9.27□□□□□ -0.93
CKAP4-202ENST00000552828 TMEM235A6NFC5 223 aa9.26□□□□□ -0.93
CKAP4-202ENST00000552828 NCBP2LA6PVI3 153 aaKnown RBP9.26□□□□□ -0.93
CKAP4-202ENST00000552828 SLC31A2O15432 143 aa9.26□□□□□ -0.93
CKAP4-202ENST00000552828 IGHG4P01861 327 aa9.26□□□□□ -0.93
CKAP4-202ENST00000552828 HNRNPCP07910 306 aaKnown RBP eCLIP9.26□□□□□ -0.93
CKAP4-202ENST00000552828 DTYMKP23919 212 aa9.26□□□□□ -0.93
CKAP4-202ENST00000552828 CD1BP29016 333 aa9.26□□□□□ -0.93
CKAP4-202ENST00000552828 CEACAM6P40199 344 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms