RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 LIN7CQ9NUP9 197 aaKnown RBP14.68□□□□□ -0.06
PRPF40B-216ENST00000552301 SCOCQ9UIL1 159 aa14.68□□□□□ -0.06
PRPF40B-216ENST00000552301 WASHC3Q9Y3C0 194 aa14.68□□□□□ -0.06
PRPF40B-216ENST00000552301 TET2Q6N021 2002 aaPredicted RBP14.68□□□□□ -0.06
PRPF40B-216ENST00000552301 M0R1X1 148 aa14.67□□□□□ -0.06
PRPF40B-216ENST00000552301 APOA2P02652 100 aa14.67□□□□□ -0.06
PRPF40B-216ENST00000552301 CT45A6P0DMU7 189 aa14.67□□□□□ -0.06
PRPF40B-216ENST00000552301 CT45A5P0DMU8 189 aa14.67□□□□□ -0.06
PRPF40B-216ENST00000552301 CT45A7P0DMV0 189 aa14.67□□□□□ -0.06
PRPF40B-216ENST00000552301 MC5RP33032 325 aa14.67□□□□□ -0.06
PRPF40B-216ENST00000552301 SOX6P35712 828 aa14.67□□□□□ -0.06
PRPF40B-216ENST00000552301 TAS2R20P59543 309 aa14.67□□□□□ -0.06
PRPF40B-216ENST00000552301 C2orf68Q2NKX9 166 aa14.67□□□□□ -0.06
PRPF40B-216ENST00000552301 PRR31Q5SQ13 230 aa14.67□□□□□ -0.06
PRPF40B-216ENST00000552301 FOXRED2Q8IWF2 684 aa14.67□□□□□ -0.06
PRPF40B-216ENST00000552301 Q8N9W7 124 aa14.67□□□□□ -0.06
PRPF40B-216ENST00000552301 KIAA1456Q9P272 454 aa14.67□□□□□ -0.06
PRPF40B-216ENST00000552301 H0YJW9 148 aa14.66□□□□□ -0.06
PRPF40B-216ENST00000552301 EIF4EP06730 217 aaKnown RBP14.66□□□□□ -0.06
PRPF40B-216ENST00000552301 PTHLHP12272 177 aa14.66□□□□□ -0.06
PRPF40B-216ENST00000552301 ZNF182P17025 639 aaPredicted RBP14.66□□□□□ -0.06
PRPF40B-216ENST00000552301 HOGA1Q86XE5 327 aa14.66□□□□□ -0.06
PRPF40B-216ENST00000552301 DRAXINQ8NBI3 349 aaPredicted RBP14.66□□□□□ -0.06
PRPF40B-216ENST00000552301 OR5AU1Q8NGC0 362 aa14.66□□□□□ -0.06
PRPF40B-216ENST00000552301 BCL7BQ9BQE9 202 aa14.66□□□□□ -0.06
PRPF40B-216ENST00000552301 FAM25AB3EWG3 89 aa14.65□□□□□ -0.06
PRPF40B-216ENST00000552301 FAM25CB3EWG5 89 aa14.65□□□□□ -0.06
PRPF40B-216ENST00000552301 FAM25GB3EWG6 89 aa14.65□□□□□ -0.06
PRPF40B-216ENST00000552301 NBR2O15453 112 aa14.65□□□□□ -0.06
PRPF40B-216ENST00000552301 KCNAB3O43448 404 aa14.65□□□□□ -0.06
PRPF40B-216ENST00000552301 HPGDSO60760 199 aa14.65□□□□□ -0.06
PRPF40B-216ENST00000552301 RBBP9O75884 186 aa14.65□□□□□ -0.06
PRPF40B-216ENST00000552301 FCER2P06734 321 aa14.65□□□□□ -0.06
PRPF40B-216ENST00000552301 NFYAP23511 347 aaPredicted RBP14.65□□□□□ -0.06
PRPF40B-216ENST00000552301 LUMP51884 338 aaPredicted RBP14.65□□□□□ -0.06
PRPF40B-216ENST00000552301 TMBIM6P55061 237 aa14.65□□□□□ -0.06
PRPF40B-216ENST00000552301 F2RL1P55085 397 aa14.65□□□□□ -0.06
PRPF40B-216ENST00000552301 CBX3Q13185 183 aa14.65□□□□□ -0.06
PRPF40B-216ENST00000552301 GVQW1Q8N7I0 195 aa14.65□□□□□ -0.06
PRPF40B-216ENST00000552301 OR4X2Q8NGF9 303 aa14.65□□□□□ -0.06
PRPF40B-216ENST00000552301 PLSCR3Q9NRY6 295 aa14.65□□□□□ -0.06
PRPF40B-216ENST00000552301 MRPS7Q9Y2R9 242 aaKnown RBP14.65□□□□□ -0.06
PRPF40B-216ENST00000552301 OR2W1Q9Y3N9 320 aa14.65□□□□□ -0.06
PRPF40B-216ENST00000552301 MEIS3P1A6NDR6 274 aa14.64□□□□□ -0.07
PRPF40B-216ENST00000552301 J3QRK9 145 aa14.64□□□□□ -0.07
PRPF40B-216ENST00000552301 IGHG2P01859 326 aa14.64□□□□□ -0.07
PRPF40B-216ENST00000552301 CSF1P09603 554 aa14.64□□□□□ -0.07
PRPF40B-216ENST00000552301 CD28P10747 220 aa14.64□□□□□ -0.07
PRPF40B-216ENST00000552301 PRSS3P35030 304 aa14.64□□□□□ -0.07
PRPF40B-216ENST00000552301 PLGLAQ15195 96 aa14.64□□□□□ -0.07
PRPF40B-216ENST00000552301 FAM71E2Q8N5Q1 922 aa14.64□□□□□ -0.07
PRPF40B-216ENST00000552301 OR5AN1Q8NGI8 311 aa14.64□□□□□ -0.07
PRPF40B-216ENST00000552301 CHPT1Q8WUD6 406 aa14.64□□□□□ -0.07
PRPF40B-216ENST00000552301 RBMXL1Q96E39 390 aaKnown RBP14.64□□□□□ -0.07
PRPF40B-216ENST00000552301 SLC35D1Q9NTN3 355 aa14.64□□□□□ -0.07
PRPF40B-216ENST00000552301 NECAP2Q9NVZ3 263 aa14.64□□□□□ -0.07
PRPF40B-216ENST00000552301 SDHAF2Q9NX18 166 aa14.64□□□□□ -0.07
PRPF40B-216ENST00000552301 GAB2Q9UQC2 676 aa14.64□□□□□ -0.07
PRPF40B-216ENST00000552301 PSMB11A5LHX3 300 aa14.63□□□□□ -0.07
PRPF40B-216ENST00000552301 AP4M1O00189 453 aa14.63□□□□□ -0.07
PRPF40B-216ENST00000552301 THBS3P49746 956 aa14.63□□□□□ -0.07
PRPF40B-216ENST00000552301 SLC35B1P78383 322 aa14.63□□□□□ -0.07
PRPF40B-216ENST00000552301 SPCS2Q15005 226 aa14.63□□□□□ -0.07
PRPF40B-216ENST00000552301 KHDC1LQ5JSQ8 128 aa14.63□□□□□ -0.07
PRPF40B-216ENST00000552301 TREML4Q6UXN2 200 aa14.63□□□□□ -0.07
PRPF40B-216ENST00000552301 PDPNQ86YL7 162 aa14.63□□□□□ -0.07
PRPF40B-216ENST00000552301 ZNF383Q8NA42 475 aa14.63□□□□□ -0.07
PRPF40B-216ENST00000552301 ADTRPQ96IZ2 230 aa14.63□□□□□ -0.07
PRPF40B-216ENST00000552301 ZNF107Q9UII5 783 aaPredicted RBP14.63□□□□□ -0.07
PRPF40B-216ENST00000552301 WNK1Q9H4A3 2382 aa14.62□□□□□ -0.07
PRPF40B-216ENST00000552301 SLC22A5O76082 557 aa14.62□□□□□ -0.07
PRPF40B-216ENST00000552301 ELK1P19419 428 aa14.62□□□□□ -0.07
PRPF40B-216ENST00000552301 CNTFRP26992 372 aa14.62□□□□□ -0.07
PRPF40B-216ENST00000552301 RTL8BQ17RB0 113 aa14.62□□□□□ -0.07
PRPF40B-216ENST00000552301 NSUN5P1Q3KNT7 163 aa14.62□□□□□ -0.07
PRPF40B-216ENST00000552301 SNX29P2Q8IUI4 249 aa14.62□□□□□ -0.07
PRPF40B-216ENST00000552301 WIPF2Q8TF74 440 aaPredicted RBP14.62□□□□□ -0.07
PRPF40B-216ENST00000552301 NOL4LQ96MY1 436 aaPredicted RBP14.62□□□□□ -0.07
PRPF40B-216ENST00000552301 TSNAXQ99598 290 aaKnown RBP14.62□□□□□ -0.07
PRPF40B-216ENST00000552301 RNF5Q99942 180 aa14.62□□□□□ -0.07
PRPF40B-216ENST00000552301 CITED2Q99967 270 aaPredicted RBP14.62□□□□□ -0.07
PRPF40B-216ENST00000552301 ADAM30Q9UKF2 790 aa14.62□□□□□ -0.07
PRPF40B-216ENST00000552301 PROP1O75360 226 aa14.61□□□□□ -0.07
PRPF40B-216ENST00000552301 OPN1MWP04001 364 aa14.61□□□□□ -0.07
PRPF40B-216ENST00000552301 OPN1MW2P0DN77 364 aa14.61□□□□□ -0.07
PRPF40B-216ENST00000552301 OPN1MW3P0DN78 364 aa14.61□□□□□ -0.07
PRPF40B-216ENST00000552301 OR5H8P0DN80 308 aa14.61□□□□□ -0.07
PRPF40B-216ENST00000552301 RPS16P62249 146 aaKnown RBP14.61□□□□□ -0.07
PRPF40B-216ENST00000552301 TAGLNQ01995 201 aaKnown RBP14.61□□□□□ -0.07
PRPF40B-216ENST00000552301 C5orf64Q2M2E5 130 aa14.61□□□□□ -0.07
PRPF40B-216ENST00000552301 HIST2H2BDQ6DRA6 164 aa14.61□□□□□ -0.07
PRPF40B-216ENST00000552301 NDUFA11Q86Y39 141 aa14.61□□□□□ -0.07
PRPF40B-216ENST00000552301 STPG2Q8N412 459 aa14.61□□□□□ -0.07
PRPF40B-216ENST00000552301 ZNF645Q8N7E2 425 aa14.61□□□□□ -0.07
PRPF40B-216ENST00000552301 NPBQ8NG41 125 aa14.61□□□□□ -0.07
PRPF40B-216ENST00000552301 FLYWCH2Q96CP2 140 aaKnown RBP14.61□□□□□ -0.07
PRPF40B-216ENST00000552301 RITA1Q96K30 269 aa14.61□□□□□ -0.07
PRPF40B-216ENST00000552301 GON7Q9BXV9 100 aa14.61□□□□□ -0.07
PRPF40B-216ENST00000552301 MMP27Q9H306 513 aa14.61□□□□□ -0.07
PRPF40B-216ENST00000552301 LINC00527Q9UJ94 153 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms