RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 SVOPQ8N4V2 548 aa11.31□□□□□ -0.6
TMEM106C-216ENST00000551305 AGMATQ9BSE5 352 aa11.31□□□□□ -0.6
TMEM106C-216ENST00000551305 NICN1Q9BSH3 213 aa11.31□□□□□ -0.6
TMEM106C-216ENST00000551305 SLA2Q9H6Q3 261 aa11.31□□□□□ -0.6
TMEM106C-216ENST00000551305 CHMP1AQ9HD42 196 aaPredicted RBP11.31□□□□□ -0.6
TMEM106C-216ENST00000551305 RANGRFQ9HD47 186 aaPredicted RBP11.31□□□□□ -0.6
TMEM106C-216ENST00000551305 SMPD3Q9NY59 655 aaPredicted RBP11.31□□□□□ -0.6
TMEM106C-216ENST00000551305 OR1A1Q9P1Q5 309 aa11.31□□□□□ -0.6
TMEM106C-216ENST00000551305 GHRLQ9UBU3 117 aa11.31□□□□□ -0.6
TMEM106C-216ENST00000551305 ADAM30Q9UKF2 790 aa11.31□□□□□ -0.6
TMEM106C-216ENST00000551305 DYNC1I1O14576 645 aa11.3□□□□□ -0.6
TMEM106C-216ENST00000551305 RBBP9O75884 186 aa11.3□□□□□ -0.6
TMEM106C-216ENST00000551305 NAPSAO96009 420 aa11.3□□□□□ -0.6
TMEM106C-216ENST00000551305 IGKV1-16P04430 117 aa11.3□□□□□ -0.6
TMEM106C-216ENST00000551305 TFAP2AP05549 437 aa11.3□□□□□ -0.6
TMEM106C-216ENST00000551305 CELP19835 753 aa11.3□□□□□ -0.6
TMEM106C-216ENST00000551305 CD40LGP29965 261 aa11.3□□□□□ -0.6
TMEM106C-216ENST00000551305 DEFA5Q01523 94 aa11.3□□□□□ -0.6
TMEM106C-216ENST00000551305 ST3GAL4Q11206 333 aa11.3□□□□□ -0.6
TMEM106C-216ENST00000551305 FXYD3Q14802 87 aa11.3□□□□□ -0.6
TMEM106C-216ENST00000551305 ZNF880Q6PDB4 577 aa11.3□□□□□ -0.6
TMEM106C-216ENST00000551305 NKAIN3Q8N8D7 197 aa11.3□□□□□ -0.6
TMEM106C-216ENST00000551305 GRPEL2Q8TAA5 225 aa11.3□□□□□ -0.6
TMEM106C-216ENST00000551305 SPATA25Q9BR10 227 aa11.3□□□□□ -0.6
TMEM106C-216ENST00000551305 HDHD3Q9BSH5 251 aaPredicted RBP11.3□□□□□ -0.6
TMEM106C-216ENST00000551305 C11orf54Q9H0W9 315 aaPredicted RBP11.3□□□□□ -0.6
TMEM106C-216ENST00000551305 C13orf42A0A1B0GVH6 325 aa11.29□□□□□ -0.6
TMEM106C-216ENST00000551305 CPEP16870 476 aa11.29□□□□□ -0.6
TMEM106C-216ENST00000551305 CEACAM6P40199 344 aa11.29□□□□□ -0.6
TMEM106C-216ENST00000551305 RPS16P62249 146 aaKnown RBP11.29□□□□□ -0.6
TMEM106C-216ENST00000551305 RPS27AP62979 156 aaKnown RBP11.29□□□□□ -0.6
TMEM106C-216ENST00000551305 MED21Q13503 144 aa11.29□□□□□ -0.6
TMEM106C-216ENST00000551305 KLF5Q13887 457 aaPredicted RBP11.29□□□□□ -0.6
TMEM106C-216ENST00000551305 ZNF383Q8NA42 475 aa11.29□□□□□ -0.6
TMEM106C-216ENST00000551305 RNF5Q99942 180 aa11.29□□□□□ -0.6
TMEM106C-216ENST00000551305 TMED9Q9BVK6 235 aa11.29□□□□□ -0.6
TMEM106C-216ENST00000551305 RETNQ9HD89 108 aa11.29□□□□□ -0.6
TMEM106C-216ENST00000551305 A0A0A6YYD4 124 aa11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 SLC22A1O15245 554 aa11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 SLC25A17O43808 307 aa11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 SCTP09683 121 aa11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 ZP3P21754 424 aa11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 SYNJ2BPP57105 145 aa11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 TAS2R43P59537 309 aa11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 SSBP2P81877 361 aaPredicted RBP11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 UNC119Q13432 240 aa11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 LRRTM1Q86UE6 522 aa11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 POC5Q8NA72 575 aa11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 OR9G4Q8NGQ1 327 aa11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 CYGBQ8WWM9 190 aa11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 TM2D1Q9BX74 207 aa11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 TMEM59Q9BXS4 323 aa11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 IZUMO1RA6ND01 250 aa11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 EFCAB10A6NFE3 127 aa11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 ITGB1BP1O14713 200 aa11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 TRBV12-3P01733 135 aa11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 UBBP0CG47 229 aa11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 PJVKQ0ZLH3 352 aa11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 LAIR2Q6ISS4 152 aa11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 TSNAXQ99598 290 aaKnown RBP11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 THAP7Q9BT49 309 aaPredicted RBP11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 TUBA4BQ9H853 241 aa11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 PLEKHJ1Q9NW61 149 aa11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 AK3Q9UIJ7 227 aa11.28□□□□□ -0.6
TMEM106C-216ENST00000551305 H0Y980 276 aa11.27□□□□□ -0.61
TMEM106C-216ENST00000551305 SOCS1O15524 211 aa11.27□□□□□ -0.61
TMEM106C-216ENST00000551305 CNIH1O95406 144 aa11.27□□□□□ -0.61
TMEM106C-216ENST00000551305 IFNA6P05013 189 aa11.27□□□□□ -0.61
TMEM106C-216ENST00000551305 CD1AP06126 327 aa11.27□□□□□ -0.61
TMEM106C-216ENST00000551305 CSN3P07498 182 aa11.27□□□□□ -0.61
TMEM106C-216ENST00000551305 ZBTB25P24278 435 aa11.27□□□□□ -0.61
TMEM106C-216ENST00000551305 MAPK3P27361 379 aaPredicted RBP11.27□□□□□ -0.61
TMEM106C-216ENST00000551305 QRFPP83859 136 aa11.27□□□□□ -0.61
TMEM106C-216ENST00000551305 ACSM3Q53FZ2 586 aa11.27□□□□□ -0.61
TMEM106C-216ENST00000551305 C1orf100Q5SVJ3 147 aa11.27□□□□□ -0.61
TMEM106C-216ENST00000551305 GLT8D1Q68CQ7 371 aa11.27□□□□□ -0.61
TMEM106C-216ENST00000551305 C10orf67Q8IYJ2 551 aa11.27□□□□□ -0.61
TMEM106C-216ENST00000551305 A0A0G2JLM5 398 aa11.26□□□□□ -0.61
TMEM106C-216ENST00000551305 TMEM14DPA8MWL7 114 aa11.26□□□□□ -0.61
TMEM106C-216ENST00000551305 H3BUA1 57 aa11.26□□□□□ -0.61
TMEM106C-216ENST00000551305 MYL12BO14950 172 aa11.26□□□□□ -0.61
TMEM106C-216ENST00000551305 SPDEFO95238 335 aa11.26□□□□□ -0.61
TMEM106C-216ENST00000551305 IGLV2-23P01705 113 aa11.26□□□□□ -0.61
TMEM106C-216ENST00000551305 WNT4P56705 351 aa11.26□□□□□ -0.61
TMEM106C-216ENST00000551305 HLA-DRB3P79483 266 aa11.26□□□□□ -0.61
TMEM106C-216ENST00000551305 RBM48Q5RL73 367 aaKnown RBP11.26□□□□□ -0.61
TMEM106C-216ENST00000551305 AHSA2Q719I0 299 aa11.26□□□□□ -0.61
TMEM106C-216ENST00000551305 MOB1BQ7L9L4 216 aa11.26□□□□□ -0.61
TMEM106C-216ENST00000551305 KCNG3Q8TAE7 436 aa11.26□□□□□ -0.61
TMEM106C-216ENST00000551305 EDARADDQ8WWZ3 215 aa11.26□□□□□ -0.61
TMEM106C-216ENST00000551305 FAM110AQ9BQ89 295 aa11.26□□□□□ -0.61
TMEM106C-216ENST00000551305 PEF1Q9UBV8 284 aaKnown RBP11.26□□□□□ -0.61
TMEM106C-216ENST00000551305 ZNF221Q9UK13 617 aa11.26□□□□□ -0.61
TMEM106C-216ENST00000551305 TRBV6-6A0A0A6YYG2 114 aa11.25□□□□□ -0.61
TMEM106C-216ENST00000551305 IGKV1-6A0A0C4DH72 117 aa11.25□□□□□ -0.61
TMEM106C-216ENST00000551305 RBMXL2O75526 392 aaKnown RBP11.25□□□□□ -0.61
TMEM106C-216ENST00000551305 CRYGBP07316 175 aa11.25□□□□□ -0.61
TMEM106C-216ENST00000551305 APELAP0DMC3 54 aa11.25□□□□□ -0.61
TMEM106C-216ENST00000551305 TTC23Q5W5X9 447 aa11.25□□□□□ -0.61
TMEM106C-216ENST00000551305 GTSCR1Q86UQ5 136 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms