RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 KIAA1456Q9P272 454 aa13.59□□□□□ -0.23
CHMP1A-208ENST00000550102 ZNF107Q9UII5 783 aaPredicted RBP13.59□□□□□ -0.23
CHMP1A-208ENST00000550102 TRIM64CA6NLI5 447 aa13.58□□□□□ -0.24
CHMP1A-208ENST00000550102 LINC01548A6NM66 108 aa13.58□□□□□ -0.24
CHMP1A-208ENST00000550102 H0YJW9 148 aa13.58□□□□□ -0.24
CHMP1A-208ENST00000550102 H7C2Y5 167 aa13.58□□□□□ -0.24
CHMP1A-208ENST00000550102 GNG2P59768 71 aa13.58□□□□□ -0.24
CHMP1A-208ENST00000550102 C5orf64Q2M2E5 130 aa13.58□□□□□ -0.24
CHMP1A-208ENST00000550102 GLDNQ6ZMI3 551 aaPredicted RBP13.58□□□□□ -0.24
CHMP1A-208ENST00000550102 CROCCP3Q8IVE0 287 aa13.58□□□□□ -0.24
CHMP1A-208ENST00000550102 OR5AN1Q8NGI8 311 aa13.58□□□□□ -0.24
CHMP1A-208ENST00000550102 NUDCD2Q8WVJ2 157 aa13.58□□□□□ -0.24
CHMP1A-208ENST00000550102 OR2D2Q9H210 308 aa13.58□□□□□ -0.24
CHMP1A-208ENST00000550102 ZNF580Q9UK33 172 aa13.58□□□□□ -0.24
CHMP1A-208ENST00000550102 ELF5Q9UKW6 265 aaPredicted RBP13.58□□□□□ -0.24
CHMP1A-208ENST00000550102 RNF150Q9ULK6 438 aa13.58□□□□□ -0.24
CHMP1A-208ENST00000550102 WIPF1O43516 503 aa13.57□□□□□ -0.24
CHMP1A-208ENST00000550102 RBBP9O75884 186 aa13.57□□□□□ -0.24
CHMP1A-208ENST00000550102 NDUFA3O95167 84 aa13.57□□□□□ -0.24
CHMP1A-208ENST00000550102 HLA-DRB1P01911 266 aa13.57□□□□□ -0.24
CHMP1A-208ENST00000550102 APOA2P02652 100 aa13.57□□□□□ -0.24
CHMP1A-208ENST00000550102 PF4P02776 101 aa13.57□□□□□ -0.24
CHMP1A-208ENST00000550102 TFAP2AP05549 437 aa13.57□□□□□ -0.24
CHMP1A-208ENST00000550102 VDAC1P21796 283 aa13.57□□□□□ -0.24
CHMP1A-208ENST00000550102 CNTFRP26992 372 aa13.57□□□□□ -0.24
CHMP1A-208ENST00000550102 RPL23AP62750 156 aaKnown RBP13.57□□□□□ -0.24
CHMP1A-208ENST00000550102 PNLIPRP3Q17RR3 467 aa13.57□□□□□ -0.24
CHMP1A-208ENST00000550102 NPBQ8NG41 125 aa13.57□□□□□ -0.24
CHMP1A-208ENST00000550102 OR5H6Q8NGV6 325 aa13.57□□□□□ -0.24
CHMP1A-208ENST00000550102 A0A0A6YYH2 397 aa13.56□□□□□ -0.24
CHMP1A-208ENST00000550102 A6NJ64 397 aa13.56□□□□□ -0.24
CHMP1A-208ENST00000550102 M0R1X1 148 aa13.56□□□□□ -0.24
CHMP1A-208ENST00000550102 IGF1P05019 195 aa13.56□□□□□ -0.24
CHMP1A-208ENST00000550102 OR8U9P0C7N5 309 aa13.56□□□□□ -0.24
CHMP1A-208ENST00000550102 OR5H8P0DN80 308 aa13.56□□□□□ -0.24
CHMP1A-208ENST00000550102 TGFBR1P36897 503 aa13.56□□□□□ -0.24
CHMP1A-208ENST00000550102 ZNF260Q3ZCT1 412 aa13.56□□□□□ -0.24
CHMP1A-208ENST00000550102 TEX38Q6PEX7 206 aa13.56□□□□□ -0.24
CHMP1A-208ENST00000550102 C1QL4Q86Z23 238 aa13.56□□□□□ -0.24
CHMP1A-208ENST00000550102 DRAXINQ8NBI3 349 aaPredicted RBP13.56□□□□□ -0.24
CHMP1A-208ENST00000550102 OR8U1Q8NH10 309 aa13.56□□□□□ -0.24
CHMP1A-208ENST00000550102 RITA1Q96K30 269 aa13.56□□□□□ -0.24
CHMP1A-208ENST00000550102 DCSTAMPQ9H295 470 aa13.56□□□□□ -0.24
CHMP1A-208ENST00000550102 IGKV1D-8A0A087WSZ0 117 aa13.55□□□□□ -0.24
CHMP1A-208ENST00000550102 NUDT19A8MXV4 375 aa13.55□□□□□ -0.24
CHMP1A-208ENST00000550102 PROP1O75360 226 aa13.55□□□□□ -0.24
CHMP1A-208ENST00000550102 SLC6A1P30531 599 aa13.55□□□□□ -0.24
CHMP1A-208ENST00000550102 LSM3P62310 102 aaKnown RBP13.55□□□□□ -0.24
CHMP1A-208ENST00000550102 FOXE3Q13461 319 aa13.55□□□□□ -0.24
CHMP1A-208ENST00000550102 PLGLAQ15195 96 aa13.55□□□□□ -0.24
CHMP1A-208ENST00000550102 CXorf66Q5JRM2 361 aaPredicted RBP13.55□□□□□ -0.24
CHMP1A-208ENST00000550102 PDPNQ86YL7 162 aa13.55□□□□□ -0.24
CHMP1A-208ENST00000550102 H1FOOQ8IZA3 346 aaPredicted RBP13.55□□□□□ -0.24
CHMP1A-208ENST00000550102 ZNF383Q8NA42 475 aa13.55□□□□□ -0.24
CHMP1A-208ENST00000550102 ST6GALNAC5Q9BVH7 336 aa13.55□□□□□ -0.24
CHMP1A-208ENST00000550102 PARP11Q9NR21 331 aa13.55□□□□□ -0.24
CHMP1A-208ENST00000550102 SPATA2Q9UM82 520 aa13.55□□□□□ -0.24
CHMP1A-208ENST00000550102 RBM7Q9Y580 266 aaKnown RBP13.55□□□□□ -0.24
CHMP1A-208ENST00000550102 G3V4G9 280 aa13.54□□□□□ -0.24
CHMP1A-208ENST00000550102 RRHO14718 337 aa13.54□□□□□ -0.24
CHMP1A-208ENST00000550102 CTXN2P0C2S0 81 aa13.54□□□□□ -0.24
CHMP1A-208ENST00000550102 CD33P20138 364 aa13.54□□□□□ -0.24
CHMP1A-208ENST00000550102 SAMD5Q5TGI4 173 aa13.54□□□□□ -0.24
CHMP1A-208ENST00000550102 KLHL30-AS1Q8NEE0 82 aa13.54□□□□□ -0.24
CHMP1A-208ENST00000550102 TSNAXQ99598 290 aaKnown RBP13.54□□□□□ -0.24
CHMP1A-208ENST00000550102 RNF5Q99942 180 aa13.54□□□□□ -0.24
CHMP1A-208ENST00000550102 OR51J1Q9H342 316 aa13.54□□□□□ -0.24
CHMP1A-208ENST00000550102 DIABLOQ9NR28 239 aa13.54□□□□□ -0.24
CHMP1A-208ENST00000550102 ZFP57Q9NU63 452 aa13.54□□□□□ -0.24
CHMP1A-208ENST00000550102 TRAV18A0A075B6X5 111 aa13.53□□□□□ -0.24
CHMP1A-208ENST00000550102 IGHV7-81A0A0B4J1V7 117 aa13.53□□□□□ -0.24
CHMP1A-208ENST00000550102 ATP6V0E1O15342 81 aa13.53□□□□□ -0.24
CHMP1A-208ENST00000550102 SSX5O60225 188 aa13.53□□□□□ -0.24
CHMP1A-208ENST00000550102 SPDEFO95238 335 aa13.53□□□□□ -0.24
CHMP1A-208ENST00000550102 IGHG4P01861 327 aa13.53□□□□□ -0.24
CHMP1A-208ENST00000550102 RPS19P39019 145 aaKnown RBP13.53□□□□□ -0.24
CHMP1A-208ENST00000550102 CFHR3Q02985 330 aa13.53□□□□□ -0.24
CHMP1A-208ENST00000550102 LIN54Q6MZP7 749 aa13.53□□□□□ -0.24
CHMP1A-208ENST00000550102 FUNDC2Q9BWH2 189 aa13.53□□□□□ -0.24
CHMP1A-208ENST00000550102 FBXL15Q9H469 300 aa13.53□□□□□ -0.24
CHMP1A-208ENST00000550102 SLC35D1Q9NTN3 355 aa13.53□□□□□ -0.24
CHMP1A-208ENST00000550102 SDHAF2Q9NX18 166 aa13.53□□□□□ -0.24
CHMP1A-208ENST00000550102 GAB2Q9UQC2 676 aa13.53□□□□□ -0.24
CHMP1A-208ENST00000550102 TGP01266 2768 aa13.52□□□□□ -0.24
CHMP1A-208ENST00000550102 IGKV1-16P04430 117 aa13.52□□□□□ -0.25
CHMP1A-208ENST00000550102 ELANEP08246 267 aa13.52□□□□□ -0.25
CHMP1A-208ENST00000550102 SMIM18P0DKX4 95 aa13.52□□□□□ -0.25
CHMP1A-208ENST00000550102 CBX3Q13185 183 aa13.52□□□□□ -0.25
CHMP1A-208ENST00000550102 UBE2NLQ5JXB2 153 aa13.52□□□□□ -0.25
CHMP1A-208ENST00000550102 CNIH2Q6PI25 160 aa13.52□□□□□ -0.25
CHMP1A-208ENST00000550102 ZNF695Q8IW36 515 aa13.52□□□□□ -0.25
CHMP1A-208ENST00000550102 RNF152Q8N8N0 203 aa13.52□□□□□ -0.25
CHMP1A-208ENST00000550102 OR13F1Q8NGS4 319 aa13.52□□□□□ -0.25
CHMP1A-208ENST00000550102 ANXA10Q9UJ72 324 aa13.52□□□□□ -0.25
CHMP1A-208ENST00000550102 RPLP1P05386 114 aaKnown RBP13.51□□□□□ -0.25
CHMP1A-208ENST00000550102 THBS3P49746 956 aa13.51□□□□□ -0.25
CHMP1A-208ENST00000550102 LINC00205P59089 165 aa13.51□□□□□ -0.25
CHMP1A-208ENST00000550102 NCS1P62166 190 aa13.51□□□□□ -0.25
CHMP1A-208ENST00000550102 RPS16P62249 146 aaKnown RBP13.51□□□□□ -0.25
CHMP1A-208ENST00000550102 TAGLNQ01995 201 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms