RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 TMEM69Q5SWH9 247 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 KPRPQ5T749 579 aaPredicted RBP3.93□□□□□ -1.78
SCAF11-212ENST00000549162 FCRLBQ6BAA4 426 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 TMEM88Q6PEY1 159 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 OR51F2Q8NH61 342 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 FAM19A4Q96LR4 140 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 C2orf50Q96LR7 162 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 RAB40CQ96S21 281 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 MED28Q9H204 178 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 NDUFA4L2Q9NRX3 87 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 RNF150Q9ULK6 438 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 CENPFP49454 3210 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 ODAMA1E959 279 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 F5H697 171 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 ENSAO43768 121 aaKnown RBP3.93□□□□□ -1.78
SCAF11-212ENST00000549162 LMX1BO60663 402 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 NCR1O76036 304 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 HPXP02790 462 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 GNLYP22749 145 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 MYCNOSP40205 109 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 CEBPGP53567 150 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 NEDD8Q15843 81 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 NNATQ16517 81 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 HLA-DRB5Q30154 266 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 OR6K6Q8NGW6 343 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 DEFB127Q9H1M4 99 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 OR51V1Q9H2C8 321 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 KCNK15Q9H427 330 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 IGHV1-69-2A0A0G2JMI3 117 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 TVP23AA6NH52 213 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 CENPXA8MT69 81 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 SEC11BP0C7V7 166 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 VDAC1P21796 283 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 NUP62P37198 522 aaPredicted RBP3.92□□□□□ -1.78
SCAF11-212ENST00000549162 GPR6P46095 362 aaPredicted RBP3.92□□□□□ -1.78
SCAF11-212ENST00000549162 TGIF2LXQ8IUE1 241 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 DMBX1Q8NFW5 382 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 OR4S1Q8NGB4 309 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 OR1J1Q8NGS3 322 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 C11orf52Q96A22 123 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 PHF21AQ96BD5 680 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 CIB3Q96Q77 187 aaPredicted RBP3.92□□□□□ -1.78
SCAF11-212ENST00000549162 RNF2Q99496 336 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 SSBP4Q9BWG4 385 aaPredicted RBP3.92□□□□□ -1.78
SCAF11-212ENST00000549162 LYRM2Q9NU23 88 aaPredicted RBP3.92□□□□□ -1.78
SCAF11-212ENST00000549162 CTSZQ9UBR2 303 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 FAM96BQ9Y3D0 163 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 ASXL3Q9C0F0 2248 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.92□□□□□ -1.78
SCAF11-212ENST00000549162 A0A1W2PR80 420 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 C5orf49A4QMS7 147 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 C15orf61A6NNL5 157 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 ANKRD65E5RJM6 399 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 C11orf98E9PRG8 122 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 K7EMT4 169 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 CDIPTO14735 213 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 PPYP01298 95 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 CD5P06127 495 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 NMBP08949 121 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 OR8U9P0C7N5 309 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 F2RP25116 425 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 MAGEB1P43366 347 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 ERFP50548 548 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 RAB13P51153 203 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 SPOCK1Q08629 439 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 EXOSC2Q13868 293 aaKnown RBP3.92□□□□□ -1.78
SCAF11-212ENST00000549162 RTL8BQ17RB0 113 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 PLET1Q6UQ28 207 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 HAPLN4Q86UW8 402 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 OR8U1Q8NH10 309 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 OR5R1Q8NH85 324 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 PIFOQ8TCI5 191 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 EXTL1Q92935 676 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 SPIN2AQ99865 258 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 SPIN2BQ9BPZ2 258 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 TMEM133Q9H2Q1 129 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 PCNX2A6NKB5 2137 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 MSGN1A6NI15 193 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 TOR1AO14656 332 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 FABP7O15540 132 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 NGFP01138 241 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 IGKV1-39P01597 117 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 IGKV1D-39P04432 117 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 SFTPDP35247 375 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 PPT1P50897 306 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 PAX9P55771 341 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 PRCDQ00LT1 54 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 CLLU1Q5K131 121 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 ZNF57Q68EA5 555 aaPredicted RBP3.92□□□□□ -1.78
SCAF11-212ENST00000549162 OR2AK2Q8NG84 335 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 OR4P4Q8NGL7 312 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 OR9G1Q8NH87 305 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 PRR25Q96S07 402 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 NABP2Q9BQ15 211 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 RNF126Q9BV68 326 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 EMC6Q9BV81 110 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 RALYQ9UKM9 306 aaKnown RBP3.92□□□□□ -1.78
SCAF11-212ENST00000549162 MAB21L2Q9Y586 359 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 DNAH1Q9P2D7 4330 aa3.92□□□□□ -1.78
SCAF11-212ENST00000549162 OR2AT4A6NND4 320 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms