RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 ITGB1BP1O14713 200 aa12.43□□□□□ -0.42
DDX54-205ENST00000548786 NBR2O15453 112 aa12.43□□□□□ -0.42
DDX54-205ENST00000548786 FCER2P06734 321 aa12.43□□□□□ -0.42
DDX54-205ENST00000548786 RPS19P39019 145 aaKnown RBP12.43□□□□□ -0.42
DDX54-205ENST00000548786 SERPINB10P48595 397 aa12.43□□□□□ -0.42
DDX54-205ENST00000548786 SLC35B1P78383 322 aa12.43□□□□□ -0.42
DDX54-205ENST00000548786 FAM71F2Q6NXP2 309 aa12.43□□□□□ -0.42
DDX54-205ENST00000548786 C18orf65Q6ZTR6 163 aa12.43□□□□□ -0.42
DDX54-205ENST00000548786 RBM7Q9Y580 266 aaKnown RBP12.43□□□□□ -0.42
DDX54-205ENST00000548786 ETV7Q9Y603 341 aa12.43□□□□□ -0.42
DDX54-205ENST00000548786 TRBV6-7A0A0A0MS04 114 aa12.42□□□□□ -0.42
DDX54-205ENST00000548786 OR5H14A6NHG9 310 aa12.42□□□□□ -0.42
DDX54-205ENST00000548786 SSX5O60225 188 aa12.42□□□□□ -0.42
DDX54-205ENST00000548786 PROP1O75360 226 aa12.42□□□□□ -0.42
DDX54-205ENST00000548786 PF4P02776 101 aa12.42□□□□□ -0.42
DDX54-205ENST00000548786 GSTP1P09211 210 aaKnown RBP12.42□□□□□ -0.42
DDX54-205ENST00000548786 PTHLHP12272 177 aa12.42□□□□□ -0.42
DDX54-205ENST00000548786 DTYMKP23919 212 aa12.42□□□□□ -0.42
DDX54-205ENST00000548786 NCS1P62166 190 aa12.42□□□□□ -0.42
DDX54-205ENST00000548786 ARL6IP1Q15041 203 aa12.42□□□□□ -0.42
DDX54-205ENST00000548786 PLGLAQ15195 96 aa12.42□□□□□ -0.42
DDX54-205ENST00000548786 ZNF260Q3ZCT1 412 aa12.42□□□□□ -0.42
DDX54-205ENST00000548786 ZNF383Q8NA42 475 aa12.42□□□□□ -0.42
DDX54-205ENST00000548786 FUNDC2Q9BWH2 189 aa12.42□□□□□ -0.42
DDX54-205ENST00000548786 FBXL15Q9H469 300 aa12.42□□□□□ -0.42
DDX54-205ENST00000548786 PARP11Q9NR21 331 aa12.42□□□□□ -0.42
DDX54-205ENST00000548786 KIAA1456Q9P272 454 aa12.42□□□□□ -0.42
DDX54-205ENST00000548786 WASHC3Q9Y3C0 194 aa12.42□□□□□ -0.42
DDX54-205ENST00000548786 WSB1Q9Y6I7 421 aa12.42□□□□□ -0.42
DDX54-205ENST00000548786 NUDT19A8MXV4 375 aa12.41□□□□□ -0.42
DDX54-205ENST00000548786 WIPF1O43516 503 aa12.41□□□□□ -0.42
DDX54-205ENST00000548786 SCGNO76038 276 aa12.41□□□□□ -0.42
DDX54-205ENST00000548786 TFAP2AP05549 437 aa12.41□□□□□ -0.42
DDX54-205ENST00000548786 SMIM18P0DKX4 95 aa12.41□□□□□ -0.42
DDX54-205ENST00000548786 VBP1P61758 197 aa12.41□□□□□ -0.42
DDX54-205ENST00000548786 C5orf64Q2M2E5 130 aa12.41□□□□□ -0.42
DDX54-205ENST00000548786 C5orf30Q96GV9 206 aa12.41□□□□□ -0.42
DDX54-205ENST00000548786 CLCC1Q96S66 551 aa12.41□□□□□ -0.42
DDX54-205ENST00000548786 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.41□□□□□ -0.42
DDX54-205ENST00000548786 MEIS3P1A6NDR6 274 aa12.4□□□□□ -0.42
DDX54-205ENST00000548786 TRIM64CA6NLI5 447 aa12.4□□□□□ -0.42
DDX54-205ENST00000548786 IGKV1-16P04430 117 aa12.4□□□□□ -0.42
DDX54-205ENST00000548786 RPLP1P05386 114 aaKnown RBP12.4□□□□□ -0.42
DDX54-205ENST00000548786 VDAC1P21796 283 aa12.4□□□□□ -0.42
DDX54-205ENST00000548786 NFYAP23511 347 aaPredicted RBP12.4□□□□□ -0.42
DDX54-205ENST00000548786 RPL23AP62750 156 aaKnown RBP12.4□□□□□ -0.42
DDX54-205ENST00000548786 H1FOOQ8IZA3 346 aaPredicted RBP12.4□□□□□ -0.42
DDX54-205ENST00000548786 KLHL30-AS1Q8NEE0 82 aa12.4□□□□□ -0.42
DDX54-205ENST00000548786 NPBQ8NG41 125 aa12.4□□□□□ -0.42
DDX54-205ENST00000548786 OR5AN1Q8NGI8 311 aa12.4□□□□□ -0.42
DDX54-205ENST00000548786 SDHAF2Q9NX18 166 aa12.4□□□□□ -0.42
DDX54-205ENST00000548786 A3GALT2U3KPV4 340 aa12.4□□□□□ -0.42
DDX54-205ENST00000548786 IGHV7-81A0A0B4J1V7 117 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 G3V318 75 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 RRHO14718 337 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 ATP6V0E1O15342 81 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 PLXNB1O43157 2135 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 HLA-DRB1P01911 266 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 APOA2P02652 100 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 CD33P20138 364 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 MC5RP33032 325 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 SCAND1P57086 179 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 RPS16P62249 146 aaKnown RBP12.39□□□□□ -0.43
DDX54-205ENST00000548786 PITPNAQ00169 270 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 NDPQ00604 133 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 PNLIPRP3Q17RR3 467 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 OXLD1Q5BKU9 147 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 LIN54Q6MZP7 749 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 Q6ZS49 121 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 C8orf86Q6ZUL3 223 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 GVQW1Q8N7I0 195 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 SAMD12Q8N8I0 201 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 OR13F1Q8NGS4 319 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 ABHD5Q8WTS1 349 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 DUX3Q96PT4 197 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 NAA50Q9GZZ1 169 aaKnown RBP12.39□□□□□ -0.43
DDX54-205ENST00000548786 OR51J1Q9H342 316 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 GHITMQ9H3K2 345 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 SLC35D1Q9NTN3 355 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 METTL1Q9UBP6 276 aaKnown RBP12.39□□□□□ -0.43
DDX54-205ENST00000548786 SPATA2Q9UM82 520 aa12.39□□□□□ -0.43
DDX54-205ENST00000548786 NOTCH3Q9UM47 2321 aa12.38□□□□□ -0.43
DDX54-205ENST00000548786 FCN1O00602 326 aa12.38□□□□□ -0.43
DDX54-205ENST00000548786 NDUFA3O95167 84 aa12.38□□□□□ -0.43
DDX54-205ENST00000548786 PRB2P02812 416 aaPredicted RBP12.38□□□□□ -0.43
DDX54-205ENST00000548786 SRSF7Q16629 238 aaKnown RBP eCLIP12.38□□□□□ -0.43
DDX54-205ENST00000548786 ECSCRQ19T08 205 aa12.38□□□□□ -0.43
DDX54-205ENST00000548786 TEX38Q6PEX7 206 aa12.38□□□□□ -0.43
DDX54-205ENST00000548786 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.38□□□□□ -0.43
DDX54-205ENST00000548786 TOLLIPQ9H0E2 274 aa12.38□□□□□ -0.43
DDX54-205ENST00000548786 DCSTAMPQ9H295 470 aa12.38□□□□□ -0.43
DDX54-205ENST00000548786 DIABLOQ9NR28 239 aa12.38□□□□□ -0.43
DDX54-205ENST00000548786 TPSG1Q9NRR2 321 aa12.38□□□□□ -0.43
DDX54-205ENST00000548786 GAB2Q9UQC2 676 aa12.38□□□□□ -0.43
DDX54-205ENST00000548786 FBXO7Q9Y3I1 522 aa12.38□□□□□ -0.43
DDX54-205ENST00000548786 SLC25A17O43808 307 aa12.37□□□□□ -0.43
DDX54-205ENST00000548786 IGLL1P15814 213 aa12.37□□□□□ -0.43
DDX54-205ENST00000548786 ARPC4P59998 168 aa12.37□□□□□ -0.43
DDX54-205ENST00000548786 PSG5Q15238 335 aa12.37□□□□□ -0.43
DDX54-205ENST00000548786 DEFB136Q30KP8 78 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms