RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 EEF1AKMT3Q96AZ1 226 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 PPCDCQ96CD2 204 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 DDIT4LQ96D03 193 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 RNF170Q96K19 258 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 TRNT1Q96Q11 434 aaKnown RBP2.43□□□□□ -2.02
PTCH1-216ENST00000548379 MICU1Q9BPX6 476 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 MRPL57Q9BQC6 102 aaKnown RBP2.43□□□□□ -2.02
PTCH1-216ENST00000548379 NAA50Q9GZZ1 169 aaKnown RBP2.43□□□□□ -2.02
PTCH1-216ENST00000548379 RRAGDQ9NQL2 400 aaPredicted RBP2.43□□□□□ -2.02
PTCH1-216ENST00000548379 CA10Q9NS85 328 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 TAS2R7Q9NYW3 318 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 TACC2O95359 2948 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 FBN1P35555 2871 aaKnown RBP2.43□□□□□ -2.02
PTCH1-216ENST00000548379 IGKV2D-24A0A075B6R9 120 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 A0A0G2JMP0 313 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 A0A0X1KG70 313 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 A8MT66 165 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 ZNF705GA8MUZ8 300 aaPredicted RBP2.42□□□□□ -2.02
PTCH1-216ENST00000548379 TMEM114B3SHH9 223 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 H3BN98 237 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 hCG_2039718K7EN88 272 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 ZNF207O43670 478 aaKnown RBP2.42□□□□□ -2.02
PTCH1-216ENST00000548379 SCN2BO60939 215 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 MPDU1O75352 247 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 PSMG1O95456 288 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 IGKV1D-16P01601 117 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 MSMBP08118 114 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 RPS17P08708 135 aaKnown RBP2.42□□□□□ -2.02
PTCH1-216ENST00000548379 RAB3AP20336 220 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 BGNP21810 368 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 PLTPP55058 493 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 OR2B6P58173 313 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 RAP1AP62834 184 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 SLC35A1P78382 337 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 HPCAP84074 193 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 SYCNQ0VAF6 134 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 EIF4EBP1Q13541 118 aaPredicted RBP2.42□□□□□ -2.02
PTCH1-216ENST00000548379 GNA13Q14344 377 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 PTGES3Q15185 160 aaKnown RBP2.42□□□□□ -2.02
PTCH1-216ENST00000548379 C5orf64Q2M2E5 130 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 METTL21CQ5VZV1 264 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 FAM71E1Q6IPT2 247 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 NOXRED1Q6NXP6 359 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 AAED1Q7RTV5 226 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 WDR86Q86TI4 376 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 NATD1Q8N6N6 113 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 CHST4Q8NCG5 386 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 OR4M2Q8NGB6 313 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 OR52E4Q8NGH9 312 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 OR4D6Q8NGJ1 314 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 GPR119Q8TDV5 335 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.42□□□□□ -2.02
PTCH1-216ENST00000548379 CDS1Q92903 461 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 CCDC124Q96CT7 223 aaKnown RBP2.42□□□□□ -2.02
PTCH1-216ENST00000548379 ZNF317Q96PQ6 595 aaPredicted RBP2.42□□□□□ -2.02
PTCH1-216ENST00000548379 ZNF382Q96SR6 550 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 STACQ99469 402 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 NAPGQ99747 312 aaPredicted RBP2.42□□□□□ -2.02
PTCH1-216ENST00000548379 TAPBPLQ9BX59 468 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 ZNF442Q9H7R0 627 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 ZNF430Q9H8G1 570 aaPredicted RBP2.42□□□□□ -2.02
PTCH1-216ENST00000548379 CACYBPQ9HB71 228 aaKnown RBP2.42□□□□□ -2.02
PTCH1-216ENST00000548379 HMG20AQ9NP66 347 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 MCUBQ9NWR8 336 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 MED29Q9NX70 200 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 STX18Q9P2W9 335 aaKnown RBP2.42□□□□□ -2.02
PTCH1-216ENST00000548379 OPN4Q9UHM6 478 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 ZNF222Q9UK12 451 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 SLC35A3Q9Y2D2 325 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 POFUT2Q9Y2G5 429 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 HDGFL3Q9Y3E1 203 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 POLR3HQ9Y535 204 aaPredicted RBP2.42□□□□□ -2.02
PTCH1-216ENST00000548379 YTHDF2Q9Y5A9 579 aaKnown RBP2.42□□□□□ -2.02
PTCH1-216ENST00000548379 DCHS2Q6V1P9 2916 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 HIVEP2P31629 2446 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 SPG11Q96JI7 2443 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 PCM1Q15154 2024 aa2.42□□□□□ -2.02
PTCH1-216ENST00000548379 NCOA6Q14686 2063 aaPredicted RBP2.41□□□□□ -2.02
PTCH1-216ENST00000548379 PRRC2CQ9Y520 2896 aaKnown RBP2.41□□□□□ -2.02
PTCH1-216ENST00000548379 IGHV1-18A0A0C4DH31 117 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 J3QLI3 93 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 M0R233 179 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 SOCS1O15524 211 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 CST4P01036 141 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 HMGN2P05204 90 aaKnown RBP2.41□□□□□ -2.02
PTCH1-216ENST00000548379 CRYBA1P05813 215 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 EIF4EP06730 217 aaKnown RBP2.41□□□□□ -2.02
PTCH1-216ENST00000548379 ADRA2AP08913 450 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 SNRPAP09012 282 aaKnown RBP2.41□□□□□ -2.02
PTCH1-216ENST00000548379 NEFHP12036 1026 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 NQO2P16083 231 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 RAB4AP20338 218 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 HTR2CP28335 458 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 ARR3P36575 388 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 HTR2BP41595 481 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 TMEM33P57088 247 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 LINC00315P59091 139 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 COPZ1P61923 177 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 GNG11P61952 73 aa2.41□□□□□ -2.02
PTCH1-216ENST00000548379 PPP1CBP62140 327 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms