RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 H0YIZ8 118 aa10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 AGFG2O95081 481 aa10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 FAM87AP0C7U9 286 aa10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 HOXB1P14653 301 aaPredicted RBP10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 COL8A1P27658 744 aa10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 COL10A1Q03692 680 aa10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 PET117Q6UWS5 81 aa10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 IER2Q9BTL4 223 aa10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 WNT5BQ9H1J7 359 aa10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 IGKV3D-11A0A0A0MRZ8 115 aa10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 TMEM250H0YL14 139 aa10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 RAB29O14966 203 aa10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 C21orf62-AS1Q17RA5 79 aa10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 IZUMO4Q1ZYL8 232 aa10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 BHLHA15Q7RTS1 189 aaPredicted RBP10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 K7ESF4 209 aa10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 MFAP2P55001 183 aa10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 SOX8P57073 446 aa10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 IL36RNQ9UBH0 155 aa10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 A0A087WWC5 75 aa10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 TRAV38-1A0A0B4J264 116 aa10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 HIST1H1BP16401 226 aaKnown RBP10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 HOXA5P20719 270 aa10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 CCL17Q92583 94 aa10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 PERPQ96FX8 193 aa10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 OR51B2Q9Y5P1 312 aa10.5□□□□□ -0.73
NPC1L1-204ENST00000546276 C21orf140B9A014 251 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 RIGQ13278 110 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 TNXAQ16473 311 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 TMEM97Q5BJF2 176 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 TMEM251Q8N6I4 163 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 TPRX1Q8N7U7 411 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 RCC1LQ96I51 464 aaKnown RBP10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 HARBI1Q96MB7 349 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 TTTY12Q9BZ98 90 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 RNF7Q9UBF6 113 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 ZNHIT1O43257 154 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 PRDX2P32119 198 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 OR8I2Q8N0Y5 310 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 SLC25A45Q8N413 288 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 OR1L8Q8NGR8 309 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 OR1L1Q8NH94 360 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 MRPL18Q9H0U6 180 aaKnown RBP10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 WIPI2Q9Y4P8 454 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 ZNF729A6NN14 1252 aaPredicted RBP10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 OR2J3O76001 311 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 CLDN14O95500 239 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 SLC35B1P78383 322 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 TMEM108Q6UXF1 575 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 TMPRSS2O15393 492 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 RAMP1O60894 148 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 PRRX1P54821 245 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 KCNMB1Q16558 191 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 MIC13Q5XKP0 118 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 SRXN1Q9BYN0 137 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 CBLN4Q9NTU7 201 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 HSPB8Q9UJY1 196 aa10.49□□□□□ -0.73
NPC1L1-204ENST00000546276 SHISA7A6NL88 538 aa10.48□□□□□ -0.73
NPC1L1-204ENST00000546276 MKRN2OSH3BPM6 223 aa10.48□□□□□ -0.73
NPC1L1-204ENST00000546276 FLYWCH2Q96CP2 140 aaKnown RBP10.48□□□□□ -0.73
NPC1L1-204ENST00000546276 DOCK4Q8N1I0 1966 aa10.48□□□□□ -0.73
NPC1L1-204ENST00000546276 ZG16O60844 167 aa10.48□□□□□ -0.73
NPC1L1-204ENST00000546276 HLA-DQA1P01909 254 aa10.48□□□□□ -0.73
NPC1L1-204ENST00000546276 PPOXP50336 477 aa10.48□□□□□ -0.73
NPC1L1-204ENST00000546276 VWA1Q6PCB0 445 aa10.48□□□□□ -0.73
NPC1L1-204ENST00000546276 TET1Q8NFU7 2136 aa10.48□□□□□ -0.73
NPC1L1-204ENST00000546276 GBF1Q92538 1859 aa10.48□□□□□ -0.73
NPC1L1-204ENST00000546276 COX5BP10606 129 aa10.48□□□□□ -0.73
NPC1L1-204ENST00000546276 WNT5AP41221 380 aa10.48□□□□□ -0.73
NPC1L1-204ENST00000546276 SPATA45Q537H7 98 aa10.48□□□□□ -0.73
NPC1L1-204ENST00000546276 DCAF10Q5QP82 559 aa10.48□□□□□ -0.73
NPC1L1-204ENST00000546276 FAM216AQ8WUB2 273 aa10.48□□□□□ -0.73
NPC1L1-204ENST00000546276 PAXXQ9BUH6 204 aa10.48□□□□□ -0.73
NPC1L1-204ENST00000546276 CLEC1BQ9P126 229 aa10.48□□□□□ -0.73
NPC1L1-204ENST00000546276 WASHC3Q9Y3C0 194 aa10.48□□□□□ -0.73
NPC1L1-204ENST00000546276 MGST3O14880 152 aa10.47□□□□□ -0.73
NPC1L1-204ENST00000546276 UCP1P25874 307 aa10.47□□□□□ -0.73
NPC1L1-204ENST00000546276 QTRT1Q9BXR0 403 aaKnown RBP10.47□□□□□ -0.73
NPC1L1-204ENST00000546276 IGHV3OR15-7A0A075B7D8 119 aa10.47□□□□□ -0.73
NPC1L1-204ENST00000546276 IBA57Q5T440 356 aaKnown RBP10.47□□□□□ -0.73
NPC1L1-204ENST00000546276 CRIPAKQ8N1N5 446 aa10.47□□□□□ -0.73
NPC1L1-204ENST00000546276 FLVCR1-AS1Q8TAF5 88 aa10.47□□□□□ -0.73
NPC1L1-204ENST00000546276 SMOC1Q9H4F8 434 aa10.47□□□□□ -0.73
NPC1L1-204ENST00000546276 UQCR10Q9UDW1 63 aa10.47□□□□□ -0.73
NPC1L1-204ENST00000546276 A0A1W2PPE3 182 aa10.47□□□□□ -0.73
NPC1L1-204ENST00000546276 NCBP2LA6PVI3 153 aaKnown RBP10.47□□□□□ -0.73
NPC1L1-204ENST00000546276 FGF5P12034 268 aa10.47□□□□□ -0.73
NPC1L1-204ENST00000546276 S100A4P26447 101 aaKnown RBP10.47□□□□□ -0.73
NPC1L1-204ENST00000546276 ZNF738Q8NE65 137 aa10.47□□□□□ -0.73
NPC1L1-204ENST00000546276 HS3ST3B1Q9Y662 390 aa10.47□□□□□ -0.73
NPC1L1-204ENST00000546276 VENTXO95231 258 aa10.47□□□□□ -0.73
NPC1L1-204ENST00000546276 UCP2P55851 309 aa10.47□□□□□ -0.73
NPC1L1-204ENST00000546276 PAQR4Q8N4S7 273 aaPredicted RBP10.47□□□□□ -0.73
NPC1L1-204ENST00000546276 Q8WTZ3 238 aa10.47□□□□□ -0.73
NPC1L1-204ENST00000546276 PLSCR2Q9NRY7 297 aa10.47□□□□□ -0.73
NPC1L1-204ENST00000546276 ONECUT1Q9UBC0 465 aa10.47□□□□□ -0.73
NPC1L1-204ENST00000546276 SIAH2O43255 324 aa10.46□□□□□ -0.73
NPC1L1-204ENST00000546276 CYP2G1PQ6ZSU1 146 aa10.46□□□□□ -0.73
NPC1L1-204ENST00000546276 PTPRZ1P23471 2315 aaPredicted RBP10.46□□□□□ -0.73
NPC1L1-204ENST00000546276 B4E171 279 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms