RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 RND3P61587 244 aa10.76□□□□□ -0.69
COL4A6-209ENST00000545689 TNFRSF9Q07011 255 aa10.76□□□□□ -0.69
COL4A6-209ENST00000545689 SCNM1Q9BWG6 230 aa10.76□□□□□ -0.69
COL4A6-209ENST00000545689 CEACAM18A8MTB9 384 aa10.76□□□□□ -0.69
COL4A6-209ENST00000545689 CTSBP07858 339 aa10.76□□□□□ -0.69
COL4A6-209ENST00000545689 SPINK2P20155 84 aa10.76□□□□□ -0.69
COL4A6-209ENST00000545689 OPN3Q9H1Y3 402 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-209ENST00000545689 NUP214P35658 2090 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-209ENST00000545689 SPAARA0A1B0GVQ0 90 aa10.76□□□□□ -0.69
COL4A6-209ENST00000545689 LDLRAD3Q86YD5 345 aa10.76□□□□□ -0.69
COL4A6-209ENST00000545689 MMD2Q8IY49 270 aa10.76□□□□□ -0.69
COL4A6-209ENST00000545689 OR5P3Q8WZ94 311 aa10.76□□□□□ -0.69
COL4A6-209ENST00000545689 GCGP01275 180 aa10.76□□□□□ -0.69
COL4A6-209ENST00000545689 CTSSP25774 331 aa10.76□□□□□ -0.69
COL4A6-209ENST00000545689 FOXL2P58012 376 aa10.76□□□□□ -0.69
COL4A6-209ENST00000545689 CXorf66Q5JRM2 361 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-209ENST00000545689 OR8I2Q8N0Y5 310 aa10.76□□□□□ -0.69
COL4A6-209ENST00000545689 RSG1Q9BU20 258 aa10.76□□□□□ -0.69
COL4A6-209ENST00000545689 ODAMA1E959 279 aa10.75□□□□□ -0.69
COL4A6-209ENST00000545689 ASPHD2Q6ICH7 369 aa10.75□□□□□ -0.69
COL4A6-209ENST00000545689 SHISA5Q8N114 240 aa10.75□□□□□ -0.69
COL4A6-209ENST00000545689 KCNAB3O43448 404 aa10.75□□□□□ -0.69
COL4A6-209ENST00000545689 SLC35E4Q6ICL7 350 aa10.75□□□□□ -0.69
COL4A6-209ENST00000545689 SGMS2Q8NHU3 365 aa10.75□□□□□ -0.69
COL4A6-209ENST00000545689 CALYQ9NYX4 217 aa10.75□□□□□ -0.69
COL4A6-209ENST00000545689 A8MWL6 223 aa10.75□□□□□ -0.69
COL4A6-209ENST00000545689 RTP5Q14D33 572 aa10.75□□□□□ -0.69
COL4A6-209ENST00000545689 MMDQ15546 238 aa10.75□□□□□ -0.69
COL4A6-209ENST00000545689 OR52M1Q8NGK5 317 aa10.75□□□□□ -0.69
COL4A6-209ENST00000545689 MRPS18CQ9Y3D5 142 aaKnown RBP10.75□□□□□ -0.69
COL4A6-209ENST00000545689 TCAPO15273 167 aa10.75□□□□□ -0.69
COL4A6-209ENST00000545689 ZNF883P0CG24 379 aa10.75□□□□□ -0.69
COL4A6-209ENST00000545689 RPL8P62917 257 aaKnown RBP10.75□□□□□ -0.69
COL4A6-209ENST00000545689 APCDD1LQ8NCL9 501 aa10.75□□□□□ -0.69
COL4A6-209ENST00000545689 STARD4Q96DR4 205 aa10.75□□□□□ -0.69
COL4A6-209ENST00000545689 ZNF430Q9H8G1 570 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-209ENST00000545689 TREM2Q9NZC2 230 aa10.75□□□□□ -0.69
COL4A6-209ENST00000545689 NAGKQ9UJ70 344 aa10.75□□□□□ -0.69
COL4A6-209ENST00000545689 SHISA3A0PJX4 238 aa10.75□□□□□ -0.69
COL4A6-209ENST00000545689 ZNF729A6NN14 1252 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-209ENST00000545689 CCL13Q99616 98 aa10.75□□□□□ -0.69
COL4A6-209ENST00000545689 CHCHD2Q9Y6H1 151 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-209ENST00000545689 CLDN18P56856 261 aa10.74□□□□□ -0.69
COL4A6-209ENST00000545689 HSPE1P61604 102 aaKnown RBP10.74□□□□□ -0.69
COL4A6-209ENST00000545689 AICDAQ9GZX7 198 aa10.74□□□□□ -0.69
COL4A6-209ENST00000545689 FAM157AC9JC47 383 aa10.74□□□□□ -0.69
COL4A6-209ENST00000545689 RPLP1P05386 114 aaKnown RBP10.74□□□□□ -0.69
COL4A6-209ENST00000545689 PRSS1P07477 247 aa10.74□□□□□ -0.69
COL4A6-209ENST00000545689 SCGB1C2P0DMR2 95 aa10.74□□□□□ -0.69
COL4A6-209ENST00000545689 ITLN1Q8WWA0 313 aa10.74□□□□□ -0.69
COL4A6-209ENST00000545689 A6NDN8 102 aa10.74□□□□□ -0.69
COL4A6-209ENST00000545689 FTH1P19P0C7X4 201 aa10.74□□□□□ -0.69
COL4A6-209ENST00000545689 PPOXP50336 477 aa10.74□□□□□ -0.69
COL4A6-209ENST00000545689 FADS6Q8N9I5 356 aa10.74□□□□□ -0.69
COL4A6-209ENST00000545689 PLSCR2Q9NRY7 297 aa10.74□□□□□ -0.69
COL4A6-209ENST00000545689 HLA-DQA1P01909 254 aa10.74□□□□□ -0.69
COL4A6-209ENST00000545689 CD99P14209 185 aa10.74□□□□□ -0.69
COL4A6-209ENST00000545689 UFC1Q9Y3C8 167 aa10.74□□□□□ -0.69
COL4A6-209ENST00000545689 RECKO95980 971 aa10.74□□□□□ -0.69
COL4A6-209ENST00000545689 IGFBP3P17936 291 aaPredicted RBP10.74□□□□□ -0.69
COL4A6-209ENST00000545689 ID1P41134 155 aa10.74□□□□□ -0.69
COL4A6-209ENST00000545689 STPG1Q5TH74 334 aa10.74□□□□□ -0.69
COL4A6-209ENST00000545689 ZNF818PQ6ZRF7 136 aa10.74□□□□□ -0.69
COL4A6-209ENST00000545689 MRPL32Q9BYC8 188 aaKnown RBP10.74□□□□□ -0.69
COL4A6-209ENST00000545689 IL36RNQ9UBH0 155 aa10.74□□□□□ -0.69
COL4A6-209ENST00000545689 FBLN5Q9UBX5 448 aa10.74□□□□□ -0.69
COL4A6-209ENST00000545689 ZP1P60852 638 aa10.73□□□□□ -0.69
COL4A6-209ENST00000545689 KLF14Q8TD94 323 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-209ENST00000545689 TMEM140Q9NV12 185 aa10.73□□□□□ -0.69
COL4A6-209ENST00000545689 TRBV9A0A0B4J1U6 114 aa10.73□□□□□ -0.69
COL4A6-209ENST00000545689 F12P00748 615 aaPredicted RBP10.73□□□□□ -0.69
COL4A6-209ENST00000545689 UNC119Q13432 240 aa10.73□□□□□ -0.69
COL4A6-209ENST00000545689 GALNT14Q96FL9 552 aa10.73□□□□□ -0.69
COL4A6-209ENST00000545689 OR4C12Q96R67 309 aa10.73□□□□□ -0.69
COL4A6-209ENST00000545689 NEUROG3Q9Y4Z2 214 aa10.73□□□□□ -0.69
COL4A6-209ENST00000545689 hCG_38984A0A1B0GV85 526 aa10.73□□□□□ -0.69
COL4A6-209ENST00000545689 SYNGR3O43761 229 aa10.73□□□□□ -0.69
COL4A6-209ENST00000545689 ZNF708P17019 499 aa10.73□□□□□ -0.69
COL4A6-209ENST00000545689 ZNF146Q15072 292 aa10.73□□□□□ -0.69
COL4A6-209ENST00000545689 PPP1R32Q7Z5V6 425 aa10.73□□□□□ -0.69
COL4A6-209ENST00000545689 C1QTNF12Q5T7M4 302 aa10.73□□□□□ -0.69
COL4A6-209ENST00000545689 FAM222BQ8WU58 562 aa10.73□□□□□ -0.69
COL4A6-209ENST00000545689 MS4A3Q96HJ5 214 aa10.73□□□□□ -0.69
COL4A6-209ENST00000545689 RHOVQ96L33 236 aa10.73□□□□□ -0.69
COL4A6-209ENST00000545689 TMUB1Q9BVT8 246 aa10.73□□□□□ -0.69
COL4A6-209ENST00000545689 F5P12259 2224 aa10.73□□□□□ -0.69
COL4A6-209ENST00000545689 TRAV30A0A087WSZ9 112 aa10.73□□□□□ -0.69
COL4A6-209ENST00000545689 NDUFB4O95168 129 aa10.73□□□□□ -0.69
COL4A6-209ENST00000545689 FGF11Q92914 225 aa10.73□□□□□ -0.69
COL4A6-209ENST00000545689 UBTD1Q9HAC8 227 aa10.73□□□□□ -0.69
COL4A6-209ENST00000545689 CARHSP1Q9Y2V2 147 aaKnown RBP10.73□□□□□ -0.69
COL4A6-209ENST00000545689 BMPR1BO00238 502 aa10.72□□□□□ -0.69
COL4A6-209ENST00000545689 WNT5AP41221 380 aa10.72□□□□□ -0.69
COL4A6-209ENST00000545689 GAMTQ14353 236 aa10.72□□□□□ -0.69
COL4A6-209ENST00000545689 OR2D3Q8NGH3 330 aa10.72□□□□□ -0.69
COL4A6-209ENST00000545689 LCTP09848 1927 aa10.72□□□□□ -0.69
COL4A6-209ENST00000545689 PDCD11Q14690 1871 aaKnown RBP10.72□□□□□ -0.69
COL4A6-209ENST00000545689 TRAV34A0A0B4J273 112 aa10.72□□□□□ -0.69
COL4A6-209ENST00000545689 MARCH11A6NNE9 402 aa10.72□□□□□ -0.69
COL4A6-209ENST00000545689 ZNF735P0CB33 412 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms