RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 IGHV2-26A0A0B4J1V2 119 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 A0A0G2JRQ6 117 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 DPRXA6NFQ7 191 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 GJE1A6NN92 205 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 C9JCJ5 164 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 HSBP1L1C9JCN9 74 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 K7ERU9 68 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 AQP7O14520 342 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 TRAPPC6AO75865 159 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 ZFAND5O76080 213 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 NDUFB4O95168 129 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 CD1BP29016 333 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 OR1D5P58170 312 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 RHOBP62745 196 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 GNB1P62873 340 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 C1orf61Q13536 156 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 KRTAP27-1Q3LI81 207 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 DCAF12Q5T6F0 453 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 STUMQ69YW2 141 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 LRP11Q86VZ4 500 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 KMT5CQ86Y97 462 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 OR2AE1Q8NHA4 323 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 CPT1CQ8TCG5 803 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 KCNS1Q96KK3 526 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 NRN1Q9NPD7 142 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 GPR27Q9NS67 375 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 RBM7Q9Y580 266 aaKnown RBP4.24□□□□□ -1.73
LMO3-229ENST00000543721 SHANK1Q9Y566 2161 aa4.24□□□□□ -1.73
LMO3-229ENST00000543721 GRIFINA4D1Z8 144 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 TNFSF12O43508 249 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 NDUFB8O95169 186 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 CXorf1O96002 111 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 HLA-DQA1P01909 254 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 ACRP10323 421 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 ANOS1P23352 680 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 TSPOP30536 169 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 ARR3P36575 388 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 CDKN1AP38936 164 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 COMPP49747 757 aaPredicted RBP4.23□□□□□ -1.73
LMO3-229ENST00000543721 LGALS4P56470 323 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 TGFBR3Q03167 851 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 SLC22A18ASQ8N1D0 253 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 NUDT10Q8NFP7 164 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.23□□□□□ -1.73
LMO3-229ENST00000543721 SPSB4Q96A44 273 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 NPCDR1Q9BY65 106 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 ERRFI1Q9UJM3 462 aaPredicted RBP4.23□□□□□ -1.73
LMO3-229ENST00000543721 VSTM5A8MXK1 200 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 SNURFLB1AK76 121 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 C1QTNF9BB2RNN3 333 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 CELA2BP08218 269 aaPredicted RBP4.23□□□□□ -1.73
LMO3-229ENST00000543721 HOXC12P31275 282 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 ARF6P62330 175 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 CATR1Q13166 79 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 VAMP3Q15836 100 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 TDRG1Q3Y452 100 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 MYO7BQ6PIF6 2116 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 PCSK4Q6UW60 755 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 Q6ZPA2 131 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 Q6ZRM9 215 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 CALHM1Q8IU99 346 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 PLXDC1Q8IUK5 500 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 SFTPA2Q8IWL1 248 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 NFAM1Q8NET5 270 aaPredicted RBP4.23□□□□□ -1.73
LMO3-229ENST00000543721 ZNF581Q9P0T4 197 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 FBXL7Q9UJT9 491 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 TP53TG3Q9ULZ0 132 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 ARL2-SNX15V9GYD0 113 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 SHISA8B8ZZ34 492 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 H3BMH7 237 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 ZNF324O75467 553 aaPredicted RBP4.23□□□□□ -1.73
LMO3-229ENST00000543721 IGKV1-5P01602 117 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 OR10J4P0C629 311 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 C1QTNF9P0C862 333 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 CBLN1P23435 193 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 NPPCP23582 126 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 THBS3P49746 956 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 GFERP55789 205 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 RHOGP84095 191 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 RNF151Q2KHN1 245 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 LRRC10Q5BKY1 277 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 ETFRF1Q6IPR1 90 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 FADS6Q8N9I5 356 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 APOBEC3DQ96AK3 386 aaPredicted RBP4.23□□□□□ -1.73
LMO3-229ENST00000543721 OR6C1Q96RD1 312 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 ZPBPQ9BS86 351 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 LRRC61Q9BV99 259 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 SFXN3Q9BWM7 321 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 PRDM14Q9GZV8 571 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 KCNIP1Q9NZI2 227 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 DOCK8Q8NF50 2099 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 ATG2BQ96BY7 2078 aa4.23□□□□□ -1.73
LMO3-229ENST00000543721 TRAV9-2A0A087WT02 112 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 RNF223E7ERA6 249 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.22□□□□□ -1.73
LMO3-229ENST00000543721 J3QR06 171 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 CYC1P08574 325 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 CD38P28907 300 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 PMP22Q01453 160 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 ZNF542PQ5EBM4 170 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms