RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 MAST4O15021 2626 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 OOSP1A8MZH6 123 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 NDUFB6O95139 128 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 APOA2P02652 100 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 TCRBP04435 133 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 CTSDP07339 412 aaPredicted RBP9.65□□□□□ -0.86
DDB1-223ENST00000543658 FBP1P09467 338 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 SLC6A1P30531 599 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 BTCP35070 178 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 REG1BP48304 166 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 THBS3P49746 956 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 ZNF137PP52743 207 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 TAS2R31P59538 309 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 SSX2Q16385 188 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 PHLDA2Q53GA4 152 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 KLF17Q5JT82 389 aaPredicted RBP9.65□□□□□ -0.86
DDB1-223ENST00000543658 TPTE2P1Q5T6R2 138 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 ZNF818PQ6ZRF7 136 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 KCTD9Q7L273 389 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 LHFPL4Q7Z7J7 247 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 OR8H3Q8N146 312 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 CENPSQ8N2Z9 138 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 DRAM1Q8N682 238 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 TCTEX1D2Q8WW35 142 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 MALSU1Q96EH3 234 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 ADTRPQ96IZ2 230 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 HSD17B10Q99714 261 aaKnown RBP9.65□□□□□ -0.86
DDB1-223ENST00000543658 AGMATQ9BSE5 352 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 RSRP1Q9BUV0 290 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 BEX2Q9BXY8 128 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 C20orf85Q9H1P6 137 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 SDHAF2Q9NX18 166 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 GAB2Q9UQC2 676 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 PRELID3BQ9Y3B1 194 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 NUBP2Q9Y5Y2 271 aa9.65□□□□□ -0.86
DDB1-223ENST00000543658 TEX13DA0A0J9YY54 714 aaPredicted RBP9.64□□□□□ -0.87
DDB1-223ENST00000543658 ARPC1BO15143 372 aaKnown RBP9.64□□□□□ -0.87
DDB1-223ENST00000543658 TNFSF12O43508 249 aa9.64□□□□□ -0.87
DDB1-223ENST00000543658 PI3P19957 117 aa9.64□□□□□ -0.87
DDB1-223ENST00000543658 GNRHRP30968 328 aa9.64□□□□□ -0.87
DDB1-223ENST00000543658 BRS3P32247 399 aa9.64□□□□□ -0.87
DDB1-223ENST00000543658 PIGPP57054 158 aa9.64□□□□□ -0.87
DDB1-223ENST00000543658 ZNF816Q0VGE8 651 aaPredicted RBP9.64□□□□□ -0.87
DDB1-223ENST00000543658 ZNF66Q6ZN08 573 aa9.64□□□□□ -0.87
DDB1-223ENST00000543658 C1orf229Q6ZS94 237 aaPredicted RBP9.64□□□□□ -0.87
DDB1-223ENST00000543658 ZNF833PQ6ZTB9 187 aa9.64□□□□□ -0.87
DDB1-223ENST00000543658 MOB3BQ86TA1 216 aa9.64□□□□□ -0.87
DDB1-223ENST00000543658 ODF3L1Q8IXM7 274 aa9.64□□□□□ -0.87
DDB1-223ENST00000543658 BVESQ8NE79 360 aa9.64□□□□□ -0.87
DDB1-223ENST00000543658 OR51H1Q8NH63 302 aa9.64□□□□□ -0.87
DDB1-223ENST00000543658 ZFAND2BQ8WV99 257 aa9.64□□□□□ -0.87
DDB1-223ENST00000543658 RTN4IP1Q8WWV3 396 aaPredicted RBP9.64□□□□□ -0.87
DDB1-223ENST00000543658 ZDHHC16Q969W1 377 aa9.64□□□□□ -0.87
DDB1-223ENST00000543658 SLC2A9Q9NRM0 540 aa9.64□□□□□ -0.87
DDB1-223ENST00000543658 LIN7CQ9NUP9 197 aaKnown RBP9.64□□□□□ -0.87
DDB1-223ENST00000543658 NUDT15Q9NV35 164 aa9.64□□□□□ -0.87
DDB1-223ENST00000543658 CDC42EP3Q9UKI2 254 aa9.64□□□□□ -0.87
DDB1-223ENST00000543658 GPR132Q9UNW8 380 aa9.64□□□□□ -0.87
DDB1-223ENST00000543658 TRAV6A0A075B6T7 132 aa9.63□□□□□ -0.87
DDB1-223ENST00000543658 IGHV1-3A0A0C4DH29 117 aa9.63□□□□□ -0.87
DDB1-223ENST00000543658 A0A0U1RQK1 487 aa9.63□□□□□ -0.87
DDB1-223ENST00000543658 H2AFB2P0C5Z0 115 aa9.63□□□□□ -0.87
DDB1-223ENST00000543658 ANXA3P12429 323 aa9.63□□□□□ -0.87
DDB1-223ENST00000543658 AKR1C4P17516 323 aa9.63□□□□□ -0.87
DDB1-223ENST00000543658 KIR2DS2P43631 304 aa9.63□□□□□ -0.87
DDB1-223ENST00000543658 RAB13P51153 203 aa9.63□□□□□ -0.87
DDB1-223ENST00000543658 RND3P61587 244 aa9.63□□□□□ -0.87
DDB1-223ENST00000543658 TAGLNQ01995 201 aaKnown RBP9.63□□□□□ -0.87
DDB1-223ENST00000543658 RTL8BQ17RB0 113 aa9.63□□□□□ -0.87
DDB1-223ENST00000543658 TRIM16LQ309B1 348 aa9.63□□□□□ -0.87
DDB1-223ENST00000543658 Q71RC1 249 aaPredicted RBP9.63□□□□□ -0.87
DDB1-223ENST00000543658 NRARPQ7Z6K4 114 aa9.63□□□□□ -0.87
DDB1-223ENST00000543658 LDLRAD3Q86YD5 345 aa9.63□□□□□ -0.87
DDB1-223ENST00000543658 SGPP2Q8IWX5 399 aa9.63□□□□□ -0.87
DDB1-223ENST00000543658 MRPL20Q9BYC9 149 aaKnown RBP9.63□□□□□ -0.87
DDB1-223ENST00000543658 VSIG4Q9Y279 399 aa9.63□□□□□ -0.87
DDB1-223ENST00000543658 BTBD17A6NE02 478 aa9.62□□□□□ -0.87
DDB1-223ENST00000543658 H7C2Y5 167 aa9.62□□□□□ -0.87
DDB1-223ENST00000543658 FSHBP01225 129 aa9.62□□□□□ -0.87
DDB1-223ENST00000543658 RRASP10301 218 aa9.62□□□□□ -0.87
DDB1-223ENST00000543658 SRD5A1P18405 259 aa9.62□□□□□ -0.87
DDB1-223ENST00000543658 DUTP33316 252 aaKnown RBP9.62□□□□□ -0.87
DDB1-223ENST00000543658 TBC1D26Q86UD7 250 aa9.62□□□□□ -0.87
DDB1-223ENST00000543658 DRAXINQ8NBI3 349 aaPredicted RBP9.62□□□□□ -0.87
DDB1-223ENST00000543658 MINDY2Q8NBR6 621 aa9.62□□□□□ -0.87
DDB1-223ENST00000543658 C22orf15Q8WYQ4 148 aa9.62□□□□□ -0.87
DDB1-223ENST00000543658 ST6GALNAC6Q969X2 333 aa9.62□□□□□ -0.87
DDB1-223ENST00000543658 MRGPRFQ96AM1 343 aa9.62□□□□□ -0.87
DDB1-223ENST00000543658 GSX1Q9H4S2 264 aaPredicted RBP9.62□□□□□ -0.87
DDB1-223ENST00000543658 C5orf66Q9H5L9 145 aa9.62□□□□□ -0.87
DDB1-223ENST00000543658 SLC35D1Q9NTN3 355 aa9.62□□□□□ -0.87
DDB1-223ENST00000543658 KCNIP3Q9Y2W7 256 aa9.62□□□□□ -0.87
DDB1-223ENST00000543658 CSPG4Q6UVK1 2322 aa9.61□□□□□ -0.87
DDB1-223ENST00000543658 ZNF469Q96JG9 3925 aaPredicted RBP9.61□□□□□ -0.87
DDB1-223ENST00000543658 OTOGQ6ZRI0 2925 aa9.61□□□□□ -0.87
DDB1-223ENST00000543658 ACANP16112 2415 aa9.61□□□□□ -0.87
DDB1-223ENST00000543658 LY6LH3BQJ8 138 aa9.61□□□□□ -0.87
DDB1-223ENST00000543658 PGLYRP1O75594 196 aaPredicted RBP9.61□□□□□ -0.87
DDB1-223ENST00000543658 B3GALNT1O75752 331 aa9.61□□□□□ -0.87
DDB1-223ENST00000543658 DHFRP00374 187 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms