RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 TCTEX1D4Q5JR98 221 aa12.84□□□□□ -0.35
CIT-212ENST00000543239 STPG2Q8N412 459 aa12.84□□□□□ -0.35
CIT-212ENST00000543239 COMMD1Q8N668 190 aa12.84□□□□□ -0.35
CIT-212ENST00000543239 NPBQ8NG41 125 aa12.84□□□□□ -0.35
CIT-212ENST00000543239 OR4F17Q8NGA8 305 aa12.84□□□□□ -0.35
CIT-212ENST00000543239 FAM110DQ8TAY7 271 aaPredicted RBP12.84□□□□□ -0.35
CIT-212ENST00000543239 SLC25A46Q96AG3 418 aa12.84□□□□□ -0.35
CIT-212ENST00000543239 KCTD12Q96CX2 325 aaKnown RBP12.84□□□□□ -0.35
CIT-212ENST00000543239 RBMXL1Q96E39 390 aaKnown RBP12.84□□□□□ -0.35
CIT-212ENST00000543239 NOL4LQ96MY1 436 aaPredicted RBP12.84□□□□□ -0.35
CIT-212ENST00000543239 OR4F4Q96R69 305 aa12.84□□□□□ -0.35
CIT-212ENST00000543239 ST6GALNAC5Q9BVH7 336 aa12.84□□□□□ -0.35
CIT-212ENST00000543239 GON7Q9BXV9 100 aa12.84□□□□□ -0.35
CIT-212ENST00000543239 MRPS26Q9BYN8 205 aaKnown RBP12.84□□□□□ -0.35
CIT-212ENST00000543239 RNF150Q9ULK6 438 aa12.84□□□□□ -0.35
CIT-212ENST00000543239 WASHC3Q9Y3C0 194 aa12.84□□□□□ -0.35
CIT-212ENST00000543239 WNK1Q9H4A3 2382 aa12.84□□□□□ -0.35
CIT-212ENST00000543239 TRAV18A0A075B6X5 111 aa12.83□□□□□ -0.36
CIT-212ENST00000543239 SSX5O60225 188 aa12.83□□□□□ -0.36
CIT-212ENST00000543239 NDUFA3O95167 84 aa12.83□□□□□ -0.36
CIT-212ENST00000543239 TFAP2AP05549 437 aa12.83□□□□□ -0.36
CIT-212ENST00000543239 OR8U9P0C7N5 309 aa12.83□□□□□ -0.36
CIT-212ENST00000543239 NCS1P62166 190 aa12.83□□□□□ -0.36
CIT-212ENST00000543239 UBE2NLQ5JXB2 153 aa12.83□□□□□ -0.36
CIT-212ENST00000543239 C10orf99Q6UWK7 81 aa12.83□□□□□ -0.36
CIT-212ENST00000543239 H1FOOQ8IZA3 346 aaPredicted RBP12.83□□□□□ -0.36
CIT-212ENST00000543239 OR8U1Q8NH10 309 aa12.83□□□□□ -0.36
CIT-212ENST00000543239 RNF5Q99942 180 aa12.83□□□□□ -0.36
CIT-212ENST00000543239 OR2D2Q9H210 308 aa12.83□□□□□ -0.36
CIT-212ENST00000543239 KIAA1456Q9P272 454 aa12.83□□□□□ -0.36
CIT-212ENST00000543239 ZNF580Q9UK33 172 aa12.83□□□□□ -0.36
CIT-212ENST00000543239 TSSC4Q9Y5U2 329 aaPredicted RBP12.83□□□□□ -0.36
CIT-212ENST00000543239 TCRBV4S1A1TA0A5B7 111 aa12.82□□□□□ -0.36
CIT-212ENST00000543239 H7C2Y5 167 aa12.82□□□□□ -0.36
CIT-212ENST00000543239 HLA-DRB1P01911 266 aa12.82□□□□□ -0.36
CIT-212ENST00000543239 VBP1P61758 197 aa12.82□□□□□ -0.36
CIT-212ENST00000543239 C5orf64Q2M2E5 130 aa12.82□□□□□ -0.36
CIT-212ENST00000543239 CNIH2Q6PI25 160 aa12.82□□□□□ -0.36
CIT-212ENST00000543239 GLDNQ6ZMI3 551 aaPredicted RBP12.82□□□□□ -0.36
CIT-212ENST00000543239 ZNF329Q86UD4 541 aa12.82□□□□□ -0.36
CIT-212ENST00000543239 ANKRD13BQ86YJ7 626 aa12.82□□□□□ -0.36
CIT-212ENST00000543239 S100A16Q96FQ6 103 aaKnown RBP12.82□□□□□ -0.36
CIT-212ENST00000543239 RITA1Q96K30 269 aa12.82□□□□□ -0.36
CIT-212ENST00000543239 HSPB9Q9BQS6 159 aa12.82□□□□□ -0.36
CIT-212ENST00000543239 AUNIPQ9H7T9 357 aa12.82□□□□□ -0.36
CIT-212ENST00000543239 ZNF107Q9UII5 783 aaPredicted RBP12.82□□□□□ -0.36
CIT-212ENST00000543239 ANXA10Q9UJ72 324 aa12.82□□□□□ -0.36
CIT-212ENST00000543239 LINC01548A6NM66 108 aa12.81□□□□□ -0.36
CIT-212ENST00000543239 M0R1X1 148 aa12.81□□□□□ -0.36
CIT-212ENST00000543239 GABARAPO95166 117 aa12.81□□□□□ -0.36
CIT-212ENST00000543239 APOA2P02652 100 aa12.81□□□□□ -0.36
CIT-212ENST00000543239 IGF1P05019 195 aa12.81□□□□□ -0.36
CIT-212ENST00000543239 CNTFRP26992 372 aa12.81□□□□□ -0.36
CIT-212ENST00000543239 PDPNQ86YL7 162 aa12.81□□□□□ -0.36
CIT-212ENST00000543239 SAMD12Q8N8I0 201 aa12.81□□□□□ -0.36
CIT-212ENST00000543239 ZNF383Q8NA42 475 aa12.81□□□□□ -0.36
CIT-212ENST00000543239 DRAXINQ8NBI3 349 aaPredicted RBP12.81□□□□□ -0.36
CIT-212ENST00000543239 R3HDM4Q96D70 268 aa12.81□□□□□ -0.36
CIT-212ENST00000543239 SDHAF2Q9NX18 166 aa12.81□□□□□ -0.36
CIT-212ENST00000543239 LINC00527Q9UJ94 153 aa12.81□□□□□ -0.36
CIT-212ENST00000543239 RBM7Q9Y580 266 aaKnown RBP12.81□□□□□ -0.36
CIT-212ENST00000543239 RRHO14718 337 aa12.8□□□□□ -0.36
CIT-212ENST00000543239 XRCC3O43542 346 aa12.8□□□□□ -0.36
CIT-212ENST00000543239 CBX5P45973 191 aa12.8□□□□□ -0.36
CIT-212ENST00000543239 TAGLNQ01995 201 aaKnown RBP12.8□□□□□ -0.36
CIT-212ENST00000543239 LIN54Q6MZP7 749 aa12.8□□□□□ -0.36
CIT-212ENST00000543239 BEST4Q8NFU0 473 aa12.8□□□□□ -0.36
CIT-212ENST00000543239 ACOT12Q8WYK0 555 aa12.8□□□□□ -0.36
CIT-212ENST00000543239 CMTM3Q96MX0 182 aa12.8□□□□□ -0.36
CIT-212ENST00000543239 OR2W1Q9Y3N9 320 aa12.8□□□□□ -0.36
CIT-212ENST00000543239 MEGF8Q7Z7M0 2845 aa12.8□□□□□ -0.36
CIT-212ENST00000543239 A0A1W2PRX2 142 aa12.79□□□□□ -0.36
CIT-212ENST00000543239 SPDEFO95238 335 aa12.79□□□□□ -0.36
CIT-212ENST00000543239 OR5H8P0DN80 308 aa12.79□□□□□ -0.36
CIT-212ENST00000543239 ALDH3B2P48448 385 aa12.79□□□□□ -0.36
CIT-212ENST00000543239 THBS3P49746 956 aa12.79□□□□□ -0.36
CIT-212ENST00000543239 CTF1Q16619 201 aa12.79□□□□□ -0.36
CIT-212ENST00000543239 KHDC1LQ5JSQ8 128 aa12.79□□□□□ -0.36
CIT-212ENST00000543239 TEX38Q6PEX7 206 aa12.79□□□□□ -0.36
CIT-212ENST00000543239 HOGA1Q86XE5 327 aa12.79□□□□□ -0.36
CIT-212ENST00000543239 TSNAXQ99598 290 aaKnown RBP12.79□□□□□ -0.36
CIT-212ENST00000543239 OR51J1Q9H342 316 aa12.79□□□□□ -0.36
CIT-212ENST00000543239 ZFP57Q9NU63 452 aa12.79□□□□□ -0.36
CIT-212ENST00000543239 IGHV7-81A0A0B4J1V7 117 aa12.78□□□□□ -0.36
CIT-212ENST00000543239 SLC22A5O76082 557 aa12.78□□□□□ -0.36
CIT-212ENST00000543239 HLA-DQB1P01920 261 aa12.78□□□□□ -0.36
CIT-212ENST00000543239 IGKV1-16P04430 117 aa12.78□□□□□ -0.36
CIT-212ENST00000543239 PF4V1P10720 104 aa12.78□□□□□ -0.36
CIT-212ENST00000543239 VDAC1P21796 283 aa12.78□□□□□ -0.36
CIT-212ENST00000543239 SLC6A1P30531 599 aa12.78□□□□□ -0.36
CIT-212ENST00000543239 RORCP51449 518 aa12.78□□□□□ -0.36
CIT-212ENST00000543239 LUMP51884 338 aaPredicted RBP12.78□□□□□ -0.36
CIT-212ENST00000543239 CFHR3Q02985 330 aa12.78□□□□□ -0.36
CIT-212ENST00000543239 TMEM69Q5SWH9 247 aa12.78□□□□□ -0.36
CIT-212ENST00000543239 GPR141Q7Z602 305 aa12.78□□□□□ -0.36
CIT-212ENST00000543239 FLYWCH2Q96CP2 140 aaKnown RBP12.78□□□□□ -0.36
CIT-212ENST00000543239 C5orf30Q96GV9 206 aa12.78□□□□□ -0.36
CIT-212ENST00000543239 ADTRPQ96IZ2 230 aa12.78□□□□□ -0.36
CIT-212ENST00000543239 NAA50Q9GZZ1 169 aaKnown RBP12.78□□□□□ -0.36
CIT-212ENST00000543239 FBXL15Q9H469 300 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms