RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 MOB3AQ96BX8 217 aa9.82□□□□□ -0.84
DDX55-210ENST00000543016 ADTRPQ96IZ2 230 aa9.82□□□□□ -0.84
DDX55-210ENST00000543016 ZNF2Q9BSG1 426 aaPredicted RBP9.82□□□□□ -0.84
DDX55-210ENST00000543016 CCDC32Q9BV29 185 aa9.82□□□□□ -0.84
DDX55-210ENST00000543016 WDR12Q9GZL7 423 aaKnown RBP9.82□□□□□ -0.84
DDX55-210ENST00000543016 PARP12Q9H0J9 701 aaKnown RBP9.82□□□□□ -0.84
DDX55-210ENST00000543016 OR2D2Q9H210 308 aa9.82□□□□□ -0.84
DDX55-210ENST00000543016 AKIP1Q9NQ31 210 aa9.82□□□□□ -0.84
DDX55-210ENST00000543016 SOX21Q9Y651 276 aaPredicted RBP9.82□□□□□ -0.84
DDX55-210ENST00000543016 OR5H14A6NHG9 310 aa9.81□□□□□ -0.84
DDX55-210ENST00000543016 FAM90A9PA6NNJ1 464 aa9.81□□□□□ -0.84
DDX55-210ENST00000543016 HOXA3O43365 443 aaPredicted RBP9.81□□□□□ -0.84
DDX55-210ENST00000543016 AADACP22760 399 aa9.81□□□□□ -0.84
DDX55-210ENST00000543016 INPP1P49441 399 aa9.81□□□□□ -0.84
DDX55-210ENST00000543016 PPP5CP53041 499 aa9.81□□□□□ -0.84
DDX55-210ENST00000543016 UCP3P55916 312 aa9.81□□□□□ -0.84
DDX55-210ENST00000543016 RIPPLY3P57055 190 aa9.81□□□□□ -0.84
DDX55-210ENST00000543016 SLC9A3R2Q15599 337 aa9.81□□□□□ -0.84
DDX55-210ENST00000543016 TRIQKQ629K1 86 aa9.81□□□□□ -0.84
DDX55-210ENST00000543016 C16orf82Q7Z2V1 217 aa9.81□□□□□ -0.84
DDX55-210ENST00000543016 MOB3BQ86TA1 216 aa9.81□□□□□ -0.84
DDX55-210ENST00000543016 DYNAPQ8N1N2 210 aa9.81□□□□□ -0.84
DDX55-210ENST00000543016 MFSD4AQ8N468 514 aa9.81□□□□□ -0.84
DDX55-210ENST00000543016 TOMM5Q8N4H5 51 aa9.81□□□□□ -0.84
DDX55-210ENST00000543016 TRIM63Q969Q1 353 aa9.81□□□□□ -0.84
DDX55-210ENST00000543016 ABHD14BQ96IU4 210 aa9.81□□□□□ -0.84
DDX55-210ENST00000543016 PRRT1Q99946 306 aa9.81□□□□□ -0.84
DDX55-210ENST00000543016 ZNF251Q9BRH9 671 aa9.81□□□□□ -0.84
DDX55-210ENST00000543016 VPREB3Q9UKI3 123 aa9.81□□□□□ -0.84
DDX55-210ENST00000543016 RNF150Q9ULK6 438 aa9.81□□□□□ -0.84
DDX55-210ENST00000543016 SETD2Q9BYW2 2564 aaPredicted RBP9.8□□□□□ -0.84
DDX55-210ENST00000543016 ANK3Q12955 4377 aaKnown RBP9.8□□□□□ -0.84
DDX55-210ENST00000543016 MDFIC2A0A1B0GVS7 189 aa9.8□□□□□ -0.84
DDX55-210ENST00000543016 DNAJC9-AS1A6NH13 148 aa9.8□□□□□ -0.84
DDX55-210ENST00000543016 H3BUX3 64 aa9.8□□□□□ -0.84
DDX55-210ENST00000543016 TIMM23O14925 209 aa9.8□□□□□ -0.84
DDX55-210ENST00000543016 RNASE1P07998 156 aaKnown RBP9.8□□□□□ -0.84
DDX55-210ENST00000543016 S100GP29377 79 aa9.8□□□□□ -0.84
DDX55-210ENST00000543016 THBS3P49746 956 aa9.8□□□□□ -0.84
DDX55-210ENST00000543016 RAB13P51153 203 aa9.8□□□□□ -0.84
DDX55-210ENST00000543016 EBI3Q14213 229 aa9.8□□□□□ -0.84
DDX55-210ENST00000543016 ZNF846Q147U1 533 aa9.8□□□□□ -0.84
DDX55-210ENST00000543016 CMTM1Q8IZ96 169 aa9.8□□□□□ -0.84
DDX55-210ENST00000543016 DRAM1Q8N682 238 aa9.8□□□□□ -0.84
DDX55-210ENST00000543016 ZDHHC22Q8N966 263 aa9.8□□□□□ -0.84
DDX55-210ENST00000543016 OR8H1Q8NGG4 311 aa9.8□□□□□ -0.84
DDX55-210ENST00000543016 OR5AN1Q8NGI8 311 aa9.8□□□□□ -0.84
DDX55-210ENST00000543016 TERB2Q8NHR7 220 aa9.8□□□□□ -0.84
DDX55-210ENST00000543016 CFHR4Q92496 578 aa9.8□□□□□ -0.84
DDX55-210ENST00000543016 HSD17B10Q99714 261 aaKnown RBP9.8□□□□□ -0.84
DDX55-210ENST00000543016 RNF5Q99942 180 aa9.8□□□□□ -0.84
DDX55-210ENST00000543016 NABP2Q9BQ15 211 aa9.8□□□□□ -0.84
DDX55-210ENST00000543016 C7orf50Q9BRJ6 194 aaKnown RBP9.8□□□□□ -0.84
DDX55-210ENST00000543016 SLC5A7Q9GZV3 580 aa9.8□□□□□ -0.84
DDX55-210ENST00000543016 SDHAF2Q9NX18 166 aa9.8□□□□□ -0.84
DDX55-210ENST00000543016 SLC2A8Q9NY64 477 aa9.8□□□□□ -0.84
DDX55-210ENST00000543016 SCP2D1Q9UJQ7 156 aa9.8□□□□□ -0.84
DDX55-210ENST00000543016 TCF19Q9Y242 345 aa9.8□□□□□ -0.84
DDX55-210ENST00000543016 SVEP1Q4LDE5 3571 aa9.8□□□□□ -0.84
DDX55-210ENST00000543016 IGKV1D-13A0A0B4J2D9 117 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 NAP1L6A6NFF2 107 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 M0QYG6 137 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 M0QZK8 103 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 M0R1X1 148 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 IGHV4-59P01825 116 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 APOA2P02652 100 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 AMY2AP04746 511 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 CT45A6P0DMU7 189 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 CT45A5P0DMU8 189 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 CT45A7P0DMV0 189 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 IGKV1-13P0DP09 117 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 RRASP10301 218 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 REG1BP48304 166 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 UBA52P62987 128 aaKnown RBP9.79□□□□□ -0.84
DDX55-210ENST00000543016 LSAMPQ13449 338 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 KLF9Q13886 244 aaPredicted RBP9.79□□□□□ -0.84
DDX55-210ENST00000543016 DIAPH2-AS1Q14236 149 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 SURF2Q15527 256 aaPredicted RBP9.79□□□□□ -0.84
DDX55-210ENST00000543016 RPL39P5Q59GN2 51 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 C16orf87Q6PH81 154 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 ZNF66Q6ZN08 573 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 LHFPL1Q86WI0 220 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 SLC38A6Q8IZM9 456 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 BVESQ8NE79 360 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 OR2T10Q8NGZ9 312 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 PIFOQ8TCI5 191 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 SECTM1Q8WVN6 248 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 CAPSLQ8WWF8 208 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 ZNF486Q96H40 463 aaPredicted RBP9.79□□□□□ -0.84
DDX55-210ENST00000543016 SCGB3A2Q96PL1 93 aa9.79□□□□□ -0.84
DDX55-210ENST00000543016 MRPL20Q9BYC9 149 aaKnown RBP9.79□□□□□ -0.84
DDX55-210ENST00000543016 TINAGL1Q9GZM7 467 aaPredicted RBP9.79□□□□□ -0.84
DDX55-210ENST00000543016 C2CD3Q4AC94 2353 aa9.78□□□□□ -0.84
DDX55-210ENST00000543016 MXRA5Q9NR99 2828 aa9.78□□□□□ -0.84
DDX55-210ENST00000543016 A6NDX4 124 aa9.78□□□□□ -0.84
DDX55-210ENST00000543016 CENPXA8MT69 81 aa9.78□□□□□ -0.84
DDX55-210ENST00000543016 RNF212BA8MTL3 300 aa9.78□□□□□ -0.84
DDX55-210ENST00000543016 PROP1O75360 226 aa9.78□□□□□ -0.84
DDX55-210ENST00000543016 VENTXO95231 258 aa9.78□□□□□ -0.84
DDX55-210ENST00000543016 MOSP00540 346 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms