RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 OPN1MW2P0DN77 364 aa12.96□□□□□ -0.33
CNOT9-208ENST00000542068 OPN1MW3P0DN78 364 aa12.96□□□□□ -0.33
CNOT9-208ENST00000542068 CLDN18P56856 261 aa12.96□□□□□ -0.33
CNOT9-208ENST00000542068 CD81P60033 236 aa12.96□□□□□ -0.33
CNOT9-208ENST00000542068 UBE2NP61088 152 aaKnown RBP12.96□□□□□ -0.33
CNOT9-208ENST00000542068 SRSF6Q13247 344 aaKnown RBP12.96□□□□□ -0.33
CNOT9-208ENST00000542068 RIPPLY2Q5TAB7 128 aa12.96□□□□□ -0.33
CNOT9-208ENST00000542068 ZNF391Q9UJN7 358 aa12.96□□□□□ -0.33
CNOT9-208ENST00000542068 PITPNC1Q9UKF7 332 aa12.96□□□□□ -0.33
CNOT9-208ENST00000542068 OTOGLQ3ZCN5 2332 aa12.96□□□□□ -0.34
CNOT9-208ENST00000542068 DNPH1O43598 174 aa12.96□□□□□ -0.34
CNOT9-208ENST00000542068 PAGE4O60829 102 aa12.96□□□□□ -0.34
CNOT9-208ENST00000542068 RAMP3O60896 148 aa12.96□□□□□ -0.34
CNOT9-208ENST00000542068 IFNA1P01562 189 aa12.96□□□□□ -0.34
CNOT9-208ENST00000542068 IGHV3-13P01766 116 aa12.96□□□□□ -0.34
CNOT9-208ENST00000542068 IGHV3-7P01780 117 aa12.96□□□□□ -0.34
CNOT9-208ENST00000542068 CTXN2P0C2S0 81 aa12.96□□□□□ -0.34
CNOT9-208ENST00000542068 CYB5R2Q6BCY4 276 aa12.96□□□□□ -0.34
CNOT9-208ENST00000542068 ACSM6Q6P461 480 aa12.96□□□□□ -0.34
CNOT9-208ENST00000542068 MDP1Q86V88 176 aa12.96□□□□□ -0.34
CNOT9-208ENST00000542068 TAF15Q92804 592 aaKnown RBP eCLIP12.96□□□□□ -0.34
CNOT9-208ENST00000542068 OBP2BQ9NPH6 170 aa12.96□□□□□ -0.34
CNOT9-208ENST00000542068 PGPEP1LA6NFU8 196 aa12.95□□□□□ -0.34
CNOT9-208ENST00000542068 B4DEV8 164 aa12.95□□□□□ -0.34
CNOT9-208ENST00000542068 G0S2P27469 103 aa12.95□□□□□ -0.34
CNOT9-208ENST00000542068 SSX2Q16385 188 aa12.95□□□□□ -0.34
CNOT9-208ENST00000542068 MRGPRGQ86SM5 289 aa12.95□□□□□ -0.34
CNOT9-208ENST00000542068 ZDHHC16Q969W1 377 aa12.95□□□□□ -0.34
CNOT9-208ENST00000542068 C1QTNF9BB2RNN3 333 aa12.95□□□□□ -0.34
CNOT9-208ENST00000542068 NXPH2O95156 264 aa12.95□□□□□ -0.34
CNOT9-208ENST00000542068 GZMBP10144 247 aa12.95□□□□□ -0.34
CNOT9-208ENST00000542068 MEF2BQ02080 365 aaPredicted RBP12.95□□□□□ -0.34
CNOT9-208ENST00000542068 PNRC1Q12796 327 aaPredicted RBP12.95□□□□□ -0.34
CNOT9-208ENST00000542068 ALKBH6Q3KRA9 238 aa12.95□□□□□ -0.34
CNOT9-208ENST00000542068 TMEM41BQ5BJD5 291 aa12.95□□□□□ -0.34
CNOT9-208ENST00000542068 CST9LP1Q5W188 147 aa12.95□□□□□ -0.34
CNOT9-208ENST00000542068 ZNF664Q8N3J9 261 aa12.95□□□□□ -0.34
CNOT9-208ENST00000542068 FGFRL1Q8N441 504 aa12.95□□□□□ -0.34
CNOT9-208ENST00000542068 TPRX1Q8N7U7 411 aa12.95□□□□□ -0.34
CNOT9-208ENST00000542068 OR51G1Q8NGK1 321 aa12.95□□□□□ -0.34
CNOT9-208ENST00000542068 OR1P1Q8NH06 330 aa12.95□□□□□ -0.34
CNOT9-208ENST00000542068 OR2J1Q9GZK6 312 aa12.95□□□□□ -0.34
CNOT9-208ENST00000542068 WDR61Q9GZS3 305 aaKnown RBP12.95□□□□□ -0.34
CNOT9-208ENST00000542068 PARLQ9H300 379 aa12.95□□□□□ -0.34
CNOT9-208ENST00000542068 DMXL1Q9Y485 3027 aa12.95□□□□□ -0.34
CNOT9-208ENST00000542068 AGFG2O95081 481 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 CD33P20138 364 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 FGF7P21781 194 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 ACP1P24666 158 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 TFF3Q07654 80 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 LRRC75BQ2VPJ9 315 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 TGIF2LXQ8IUE1 241 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 PRDM14Q9GZV8 571 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 CDH20Q9HBT6 801 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 APC2O95996 2303 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 KLRC4-KLRK1H3BQV0 150 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 CD46P15529 392 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 PSMB3P49720 205 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 RPL23P62829 140 aaKnown RBP12.94□□□□□ -0.34
CNOT9-208ENST00000542068 ZNF585BQ52M93 769 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 FFAR4Q5NUL3 377 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 GTF3AQ92664 365 aaKnown RBP12.94□□□□□ -0.34
CNOT9-208ENST00000542068 FAM234AQ9H0X4 552 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 NAT8Q9UHE5 227 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 INTS1Q8N201 2190 aaKnown RBP12.94□□□□□ -0.34
CNOT9-208ENST00000542068 IGHV3-43A0A0B4J1X8 118 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 DEFB108AA8MXU0 73 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 CYC1P08574 325 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 IGHV3-43DP0DP04 118 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 FABP6P51161 128 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 OR8G1Q15617 311 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 OR10G4Q8NGN3 311 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 OR10G9Q8NGN4 311 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 OR10G7Q8NGN6 311 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 RFESDQ8TAC1 157 aa12.94□□□□□ -0.34
CNOT9-208ENST00000542068 DCHS1Q96JQ0 3298 aa12.93□□□□□ -0.34
CNOT9-208ENST00000542068 SCGB1D1O95968 90 aa12.93□□□□□ -0.34
CNOT9-208ENST00000542068 SELLP14151 372 aa12.93□□□□□ -0.34
CNOT9-208ENST00000542068 COL8A2P25067 703 aa12.93□□□□□ -0.34
CNOT9-208ENST00000542068 GNB2P62879 340 aa12.93□□□□□ -0.34
CNOT9-208ENST00000542068 GCSAMLQ5JQS6 135 aa12.93□□□□□ -0.34
CNOT9-208ENST00000542068 ZNF826PQ6ZT77 177 aa12.93□□□□□ -0.34
CNOT9-208ENST00000542068 OR5P3Q8WZ94 311 aa12.93□□□□□ -0.34
CNOT9-208ENST00000542068 TRIB1Q96RU8 372 aa12.93□□□□□ -0.34
CNOT9-208ENST00000542068 TMEM9BQ9NQ34 198 aa12.93□□□□□ -0.34
CNOT9-208ENST00000542068 SP1P08047 785 aa12.93□□□□□ -0.34
CNOT9-208ENST00000542068 TMEM183AQ8IXX5 376 aa12.93□□□□□ -0.34
CNOT9-208ENST00000542068 SPSB4Q96A44 273 aa12.93□□□□□ -0.34
CNOT9-208ENST00000542068 ABHD14BQ96IU4 210 aa12.93□□□□□ -0.34
CNOT9-208ENST00000542068 PRO3102Q9H379 93 aa12.93□□□□□ -0.34
CNOT9-208ENST00000542068 TRGV5A0A0B4J1U4 118 aa12.93□□□□□ -0.34
CNOT9-208ENST00000542068 DUXBA0A1W2PPF3 345 aa12.93□□□□□ -0.34
CNOT9-208ENST00000542068 RND2P52198 227 aa12.93□□□□□ -0.34
CNOT9-208ENST00000542068 FAM78BQ5VT40 261 aa12.93□□□□□ -0.34
CNOT9-208ENST00000542068 SP5Q6BEB4 398 aaPredicted RBP12.93□□□□□ -0.34
CNOT9-208ENST00000542068 DRAM1Q8N682 238 aa12.93□□□□□ -0.34
CNOT9-208ENST00000542068 LURAP1Q96LR2 239 aa12.93□□□□□ -0.34
CNOT9-208ENST00000542068 TECTBQ96PL2 329 aa12.93□□□□□ -0.34
CNOT9-208ENST00000542068 SLC31A2O15432 143 aa12.92□□□□□ -0.34
CNOT9-208ENST00000542068 WISP2O76076 250 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms