RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 NKAIN3Q8N8D7 197 aa9.98□□□□□ -0.81
SCARB1-207ENST00000541661 OR9G4Q8NGQ1 327 aa9.98□□□□□ -0.81
SCARB1-207ENST00000541661 IL17DQ8TAD2 202 aa9.98□□□□□ -0.81
SCARB1-207ENST00000541661 IL1F10Q8WWZ1 152 aa9.98□□□□□ -0.81
SCARB1-207ENST00000541661 NEDD4LQ96PU5 975 aa9.98□□□□□ -0.81
SCARB1-207ENST00000541661 DERL3Q96Q80 235 aa9.98□□□□□ -0.81
SCARB1-207ENST00000541661 CLCC1Q96S66 551 aa9.98□□□□□ -0.81
SCARB1-207ENST00000541661 FAAP24Q9BTP7 215 aa9.98□□□□□ -0.81
SCARB1-207ENST00000541661 SIGLEC8Q9NYZ4 499 aa9.98□□□□□ -0.81
SCARB1-207ENST00000541661 ALMS1Q8TCU4 4167 aa9.98□□□□□ -0.81
SCARB1-207ENST00000541661 A0A0G2JLM5 398 aa9.97□□□□□ -0.81
SCARB1-207ENST00000541661 C13orf42A0A1B0GVH6 325 aa9.97□□□□□ -0.81
SCARB1-207ENST00000541661 PROP1O75360 226 aa9.97□□□□□ -0.81
SCARB1-207ENST00000541661 BRI3O95415 125 aa9.97□□□□□ -0.81
SCARB1-207ENST00000541661 NAPSAO96009 420 aa9.97□□□□□ -0.81
SCARB1-207ENST00000541661 CD1AP06126 327 aa9.97□□□□□ -0.81
SCARB1-207ENST00000541661 UBBP0CG47 229 aa9.97□□□□□ -0.81
SCARB1-207ENST00000541661 SNRPBP14678 240 aaKnown RBP9.97□□□□□ -0.81
SCARB1-207ENST00000541661 MED21Q13503 144 aa9.97□□□□□ -0.81
SCARB1-207ENST00000541661 ZFP41Q8N8Y5 198 aa9.97□□□□□ -0.81
SCARB1-207ENST00000541661 POC5Q8NA72 575 aa9.97□□□□□ -0.81
SCARB1-207ENST00000541661 FAM46BQ96A09 425 aa9.97□□□□□ -0.81
SCARB1-207ENST00000541661 TMEM80Q96HE8 168 aa9.97□□□□□ -0.81
SCARB1-207ENST00000541661 ABHD14BQ96IU4 210 aa9.97□□□□□ -0.81
SCARB1-207ENST00000541661 TSNAXQ99598 290 aaKnown RBP9.97□□□□□ -0.81
SCARB1-207ENST00000541661 TRBV6-6A0A0A6YYG2 114 aa9.96□□□□□ -0.82
SCARB1-207ENST00000541661 MECP2P51608 486 aaKnown RBP9.96□□□□□ -0.82
SCARB1-207ENST00000541661 TAS2R43P59537 309 aa9.96□□□□□ -0.82
SCARB1-207ENST00000541661 FXYD3Q14802 87 aa9.96□□□□□ -0.82
SCARB1-207ENST00000541661 LINC00322Q6ZN03 302 aaPredicted RBP9.96□□□□□ -0.82
SCARB1-207ENST00000541661 C6orf201Q7Z4U5 140 aa9.96□□□□□ -0.82
SCARB1-207ENST00000541661 GTSCR1Q86UQ5 136 aa9.96□□□□□ -0.82
SCARB1-207ENST00000541661 PARP12Q9H0J9 701 aaKnown RBP9.96□□□□□ -0.82
SCARB1-207ENST00000541661 TUBA4BQ9H853 241 aa9.96□□□□□ -0.82
SCARB1-207ENST00000541661 ANKRD34BA5PLL1 514 aa9.95□□□□□ -0.82
SCARB1-207ENST00000541661 IGKV1-16P04430 117 aa9.95□□□□□ -0.82
SCARB1-207ENST00000541661 CSN3P07498 182 aa9.95□□□□□ -0.82
SCARB1-207ENST00000541661 CPEP16870 476 aa9.95□□□□□ -0.82
SCARB1-207ENST00000541661 HTR2CP28335 458 aa9.95□□□□□ -0.82
SCARB1-207ENST00000541661 RPS27AP62979 156 aaKnown RBP9.95□□□□□ -0.82
SCARB1-207ENST00000541661 SSBP2P81877 361 aaPredicted RBP9.95□□□□□ -0.82
SCARB1-207ENST00000541661 LCN12Q6JVE5 192 aa9.95□□□□□ -0.82
SCARB1-207ENST00000541661 ZNF343Q6P1L6 599 aa9.95□□□□□ -0.82
SCARB1-207ENST00000541661 MOB1BQ7L9L4 216 aa9.95□□□□□ -0.82
SCARB1-207ENST00000541661 C10orf67Q8IYJ2 551 aa9.95□□□□□ -0.82
SCARB1-207ENST00000541661 Q8N402 240 aa9.95□□□□□ -0.82
SCARB1-207ENST00000541661 ZNF555Q8NEP9 628 aa9.95□□□□□ -0.82
SCARB1-207ENST00000541661 EDARADDQ8WWZ3 215 aa9.95□□□□□ -0.82
SCARB1-207ENST00000541661 THRSPQ92748 146 aa9.95□□□□□ -0.82
SCARB1-207ENST00000541661 PTX4Q96A99 478 aa9.95□□□□□ -0.82
SCARB1-207ENST00000541661 TMEM68Q96MH6 324 aa9.95□□□□□ -0.82
SCARB1-207ENST00000541661 TMED9Q9BVK6 235 aa9.95□□□□□ -0.82
SCARB1-207ENST00000541661 TM2D1Q9BX74 207 aa9.95□□□□□ -0.82
SCARB1-207ENST00000541661 C11orf54Q9H0W9 315 aaPredicted RBP9.95□□□□□ -0.82
SCARB1-207ENST00000541661 HIPK2Q9H2X6 1198 aa9.95□□□□□ -0.82
SCARB1-207ENST00000541661 RIMS4Q9H426 269 aaPredicted RBP9.95□□□□□ -0.82
SCARB1-207ENST00000541661 ZNF355PQ9NSJ1 428 aa9.95□□□□□ -0.82
SCARB1-207ENST00000541661 AADACP22760 399 aa9.94□□□□□ -0.82
SCARB1-207ENST00000541661 ZBTB25P24278 435 aa9.94□□□□□ -0.82
SCARB1-207ENST00000541661 CEACAM6P40199 344 aa9.94□□□□□ -0.82
SCARB1-207ENST00000541661 SYNJ2BPP57105 145 aa9.94□□□□□ -0.82
SCARB1-207ENST00000541661 RPS16P62249 146 aaKnown RBP9.94□□□□□ -0.82
SCARB1-207ENST00000541661 TATDN3Q17R31 274 aa9.94□□□□□ -0.82
SCARB1-207ENST00000541661 C1orf100Q5SVJ3 147 aa9.94□□□□□ -0.82
SCARB1-207ENST00000541661 OR10K2Q6IF99 312 aa9.94□□□□□ -0.82
SCARB1-207ENST00000541661 PDPNQ86YL7 162 aa9.94□□□□□ -0.82
SCARB1-207ENST00000541661 ZNF383Q8NA42 475 aa9.94□□□□□ -0.82
SCARB1-207ENST00000541661 DRAXINQ8NBI3 349 aaPredicted RBP9.94□□□□□ -0.82
SCARB1-207ENST00000541661 OR5T1Q8NG75 326 aa9.94□□□□□ -0.82
SCARB1-207ENST00000541661 OR2K2Q8NGT1 345 aa9.94□□□□□ -0.82
SCARB1-207ENST00000541661 GRPEL2Q8TAA5 225 aa9.94□□□□□ -0.82
SCARB1-207ENST00000541661 KCNG3Q8TAE7 436 aa9.94□□□□□ -0.82
SCARB1-207ENST00000541661 TMEM59Q9BXS4 323 aa9.94□□□□□ -0.82
SCARB1-207ENST00000541661 TINAGL1Q9GZM7 467 aaPredicted RBP9.94□□□□□ -0.82
SCARB1-207ENST00000541661 PEF1Q9UBV8 284 aaKnown RBP9.94□□□□□ -0.82
SCARB1-207ENST00000541661 PNMA8CA0A1B0GUJ8 204 aa9.93□□□□□ -0.82
SCARB1-207ENST00000541661 SHISA3A0PJX4 238 aa9.93□□□□□ -0.82
SCARB1-207ENST00000541661 IZUMO1RA6ND01 250 aa9.93□□□□□ -0.82
SCARB1-207ENST00000541661 EFCAB10A6NFE3 127 aa9.93□□□□□ -0.82
SCARB1-207ENST00000541661 SLC25A17O43808 307 aa9.93□□□□□ -0.82
SCARB1-207ENST00000541661 CRYGBP07316 175 aa9.93□□□□□ -0.82
SCARB1-207ENST00000541661 CD37P11049 281 aa9.93□□□□□ -0.82
SCARB1-207ENST00000541661 CELP19835 753 aa9.93□□□□□ -0.82
SCARB1-207ENST00000541661 MAPK3P27361 379 aaPredicted RBP9.93□□□□□ -0.82
SCARB1-207ENST00000541661 LINC00205P59089 165 aa9.93□□□□□ -0.82
SCARB1-207ENST00000541661 QRFPP83859 136 aa9.93□□□□□ -0.82
SCARB1-207ENST00000541661 ST3GAL4Q11206 333 aa9.93□□□□□ -0.82
SCARB1-207ENST00000541661 PQLC1Q8N2U9 271 aa9.93□□□□□ -0.82
SCARB1-207ENST00000541661 GGHQ92820 318 aa9.93□□□□□ -0.82
SCARB1-207ENST00000541661 NICN1Q9BSH3 213 aa9.93□□□□□ -0.82
SCARB1-207ENST00000541661 CHMP1AQ9HD42 196 aaPredicted RBP9.93□□□□□ -0.82
SCARB1-207ENST00000541661 SMPD3Q9NY59 655 aaPredicted RBP9.93□□□□□ -0.82
SCARB1-207ENST00000541661 OR1A1Q9P1Q5 309 aa9.93□□□□□ -0.82
SCARB1-207ENST00000541661 MGAT4AQ9UM21 535 aa9.93□□□□□ -0.82
SCARB1-207ENST00000541661 CEPT1Q9Y6K0 416 aa9.93□□□□□ -0.82
SCARB1-207ENST00000541661 TMEM14DPA8MWL7 114 aa9.92□□□□□ -0.82
SCARB1-207ENST00000541661 OR2A4O95047 310 aa9.92□□□□□ -0.82
SCARB1-207ENST00000541661 CNIH1O95406 144 aa9.92□□□□□ -0.82
SCARB1-207ENST00000541661 IGLV2-23P01705 113 aa9.92□□□□□ -0.82
SCARB1-207ENST00000541661 APOA2P02652 100 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms