RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 IFITM5A6NNB3 132 aa16.35■□□□□ 0.21
CHFR-217ENST00000540537 GALP22466 123 aa16.35■□□□□ 0.21
CHFR-217ENST00000540537 MYL9P24844 172 aa16.35■□□□□ 0.21
CHFR-217ENST00000540537 CRIP2P52943 208 aaPredicted RBP16.35■□□□□ 0.21
CHFR-217ENST00000540537 OR10A3P58181 314 aa16.35■□□□□ 0.21
CHFR-217ENST00000540537 MRPS15P82914 257 aaKnown RBP16.35■□□□□ 0.21
CHFR-217ENST00000540537 FHL3Q13643 280 aa16.35■□□□□ 0.21
CHFR-217ENST00000540537 ZNF660Q6AZW8 331 aaPredicted RBP16.35■□□□□ 0.21
CHFR-217ENST00000540537 MINDY2Q8NBR6 621 aa16.35■□□□□ 0.21
CHFR-217ENST00000540537 RAB3CQ96E17 227 aa16.35■□□□□ 0.21
CHFR-217ENST00000540537 UBE2E2Q96LR5 201 aa16.35■□□□□ 0.21
CHFR-217ENST00000540537 FBXL15Q9H469 300 aa16.35■□□□□ 0.21
CHFR-217ENST00000540537 GSTP1P09211 210 aaKnown RBP16.34■□□□□ 0.21
CHFR-217ENST00000540537 CD3GP09693 182 aa16.34■□□□□ 0.21
CHFR-217ENST00000540537 RAB6AP20340 208 aa16.34■□□□□ 0.21
CHFR-217ENST00000540537 SERPINB10P48595 397 aa16.34■□□□□ 0.21
CHFR-217ENST00000540537 NDPQ00604 133 aa16.34■□□□□ 0.21
CHFR-217ENST00000540537 KIAA0141Q14154 515 aaPredicted RBP16.34■□□□□ 0.21
CHFR-217ENST00000540537 ZNF491Q8N8L2 437 aa16.34■□□□□ 0.21
CHFR-217ENST00000540537 OR4A4PQ8NGN8 299 aa16.34■□□□□ 0.21
CHFR-217ENST00000540537 TOLLIPQ9H0E2 274 aa16.34■□□□□ 0.21
CHFR-217ENST00000540537 KLK15Q9H2R5 256 aa16.34■□□□□ 0.21
CHFR-217ENST00000540537 ZNF221Q9UK13 617 aa16.34■□□□□ 0.21
CHFR-217ENST00000540537 VSIG4Q9Y279 399 aa16.34■□□□□ 0.21
CHFR-217ENST00000540537 KCNK7Q9Y2U2 307 aa16.34■□□□□ 0.21
CHFR-217ENST00000540537 H7C2Y5 167 aa16.33■□□□□ 0.2
CHFR-217ENST00000540537 PROP1O75360 226 aa16.33■□□□□ 0.2
CHFR-217ENST00000540537 RAB3BP20337 219 aa16.33■□□□□ 0.2
CHFR-217ENST00000540537 DGCR2P98153 550 aa16.33■□□□□ 0.2
CHFR-217ENST00000540537 RUNX1Q01196 453 aa16.33■□□□□ 0.2
CHFR-217ENST00000540537 PLGLAQ15195 96 aa16.33■□□□□ 0.2
CHFR-217ENST00000540537 C19orf54Q5BKX5 351 aa16.33■□□□□ 0.2
CHFR-217ENST00000540537 DEFB121Q5J5C9 76 aa16.33■□□□□ 0.2
CHFR-217ENST00000540537 OR10R2Q8NGX6 335 aa16.33■□□□□ 0.2
CHFR-217ENST00000540537 RDH8Q9NYR8 311 aa16.33■□□□□ 0.2
CHFR-217ENST00000540537 RNF150Q9ULK6 438 aa16.33■□□□□ 0.2
CHFR-217ENST00000540537 I3L521 148 aa16.32■□□□□ 0.2
CHFR-217ENST00000540537 FABP7O15540 132 aa16.32■□□□□ 0.2
CHFR-217ENST00000540537 DIRAS3O95661 229 aa16.32■□□□□ 0.2
CHFR-217ENST00000540537 ATP6V1G2O95670 118 aa16.32■□□□□ 0.2
CHFR-217ENST00000540537 FCGR3AP08637 254 aa16.32■□□□□ 0.2
CHFR-217ENST00000540537 GADD45AP24522 165 aa16.32■□□□□ 0.2
CHFR-217ENST00000540537 RAB9AP51151 201 aa16.32■□□□□ 0.2
CHFR-217ENST00000540537 CX3CL1P78423 397 aa16.32■□□□□ 0.2
CHFR-217ENST00000540537 DCTN2Q13561 401 aaKnown RBP16.32■□□□□ 0.2
CHFR-217ENST00000540537 MOGAT2Q3SYC2 334 aa16.32■□□□□ 0.2
CHFR-217ENST00000540537 C9orf66Q5T8R8 295 aa16.32■□□□□ 0.2
CHFR-217ENST00000540537 UBE2UQ5VVX9 321 aa16.32■□□□□ 0.2
CHFR-217ENST00000540537 TCTEX1D1Q8N7M0 179 aa16.32■□□□□ 0.2
CHFR-217ENST00000540537 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.32■□□□□ 0.2
CHFR-217ENST00000540537 OR11H1Q8NG94 326 aa16.32■□□□□ 0.2
CHFR-217ENST00000540537 CABLES2Q9BTV7 478 aa16.32■□□□□ 0.2
CHFR-217ENST00000540537 GNB4Q9HAV0 340 aa16.32■□□□□ 0.2
CHFR-217ENST00000540537 FBXO7Q9Y3I1 522 aa16.32■□□□□ 0.2
CHFR-217ENST00000540537 DNAH9Q9NYC9 4486 aa16.31■□□□□ 0.2
CHFR-217ENST00000540537 RAB27BO00194 218 aa16.31■□□□□ 0.2
CHFR-217ENST00000540537 MFNGO00587 321 aa16.31■□□□□ 0.2
CHFR-217ENST00000540537 RAMP3O60896 148 aa16.31■□□□□ 0.2
CHFR-217ENST00000540537 TFAP2AP05549 437 aa16.31■□□□□ 0.2
CHFR-217ENST00000540537 HIST1H1DP16402 221 aaKnown RBP16.31■□□□□ 0.2
CHFR-217ENST00000540537 ECSCRQ19T08 205 aa16.31■□□□□ 0.2
CHFR-217ENST00000540537 C22orf42Q6IC83 251 aa16.31■□□□□ 0.2
CHFR-217ENST00000540537 PDPNQ86YL7 162 aa16.31■□□□□ 0.2
CHFR-217ENST00000540537 ZNF383Q8NA42 475 aa16.31■□□□□ 0.2
CHFR-217ENST00000540537 DRAXINQ8NBI3 349 aaPredicted RBP16.31■□□□□ 0.2
CHFR-217ENST00000540537 COL7A1Q02388 2944 aa16.3■□□□□ 0.2
CHFR-217ENST00000540537 METTL21EPA6NDL7 271 aa16.3■□□□□ 0.2
CHFR-217ENST00000540537 FCN1O00602 326 aa16.3■□□□□ 0.2
CHFR-217ENST00000540537 SPDEFO95238 335 aa16.3■□□□□ 0.2
CHFR-217ENST00000540537 APOA2P02652 100 aa16.3■□□□□ 0.2
CHFR-217ENST00000540537 OR8U8P0C7N1 319 aa16.3■□□□□ 0.2
CHFR-217ENST00000540537 GNB3P16520 340 aa16.3■□□□□ 0.2
CHFR-217ENST00000540537 LUMP51884 338 aaPredicted RBP16.3■□□□□ 0.2
CHFR-217ENST00000540537 TMEM267Q0VDI3 215 aaPredicted RBP16.3■□□□□ 0.2
CHFR-217ENST00000540537 PSG5Q15238 335 aa16.3■□□□□ 0.2
CHFR-217ENST00000540537 TSNAXQ99598 290 aaKnown RBP16.3■□□□□ 0.2
CHFR-217ENST00000540537 Q9H521 79 aa16.3■□□□□ 0.2
CHFR-217ENST00000540537 METTL1Q9UBP6 276 aaKnown RBP16.3■□□□□ 0.2
CHFR-217ENST00000540537 GAB2Q9UQC2 676 aa16.3■□□□□ 0.2
CHFR-217ENST00000540537 FOXA2Q9Y261 457 aaPredicted RBP16.3■□□□□ 0.2
CHFR-217ENST00000540537 NUBP2Q9Y5Y2 271 aa16.3■□□□□ 0.2
CHFR-217ENST00000540537 TRBV6-7A0A0A0MS04 114 aa16.29■□□□□ 0.2
CHFR-217ENST00000540537 A0A0B4J203 849 aa16.29■□□□□ 0.2
CHFR-217ENST00000540537 A0A1W2PN81 502 aa16.29■□□□□ 0.2
CHFR-217ENST00000540537 SEC14L6B5MCN3 397 aa16.29■□□□□ 0.2
CHFR-217ENST00000540537 BET1O15155 118 aa16.29■□□□□ 0.2
CHFR-217ENST00000540537 IGKV1-16P04430 117 aa16.29■□□□□ 0.2
CHFR-217ENST00000540537 CHRNA7P36544 502 aa16.29■□□□□ 0.2
CHFR-217ENST00000540537 ZNF616Q08AN1 781 aa16.29■□□□□ 0.2
CHFR-217ENST00000540537 NR2C2APQ86WQ0 139 aa16.29■□□□□ 0.2
CHFR-217ENST00000540537 SPARTQ8N0X7 666 aa16.29■□□□□ 0.2
CHFR-217ENST00000540537 OR1N2Q8NGR9 330 aa16.29■□□□□ 0.2
CHFR-217ENST00000540537 OR10J5Q8NHC4 309 aa16.29■□□□□ 0.2
CHFR-217ENST00000540537 ABHD5Q8WTS1 349 aa16.29■□□□□ 0.2
CHFR-217ENST00000540537 FCGR1BQ92637 280 aa16.29■□□□□ 0.2
CHFR-217ENST00000540537 M0R1X1 148 aa16.28■□□□□ 0.2
CHFR-217ENST00000540537 SOX15O60248 233 aa16.28■□□□□ 0.2
CHFR-217ENST00000540537 GSTT2P0CG29 244 aa16.28■□□□□ 0.2
CHFR-217ENST00000540537 GSTT2BP0CG30 244 aa16.28■□□□□ 0.2
CHFR-217ENST00000540537 EGR2P11161 476 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms