RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 MRGPRDQ8TDS7 321 aa14.05□□□□□ -0.16
COPS3-212ENST00000539941 SECTM1Q8WVN6 248 aa14.05□□□□□ -0.16
COPS3-212ENST00000539941 MALSU1Q96EH3 234 aa14.05□□□□□ -0.16
COPS3-212ENST00000539941 WDR89Q96FK6 387 aaPredicted RBP14.05□□□□□ -0.16
COPS3-212ENST00000539941 SUCNR1Q9BXA5 334 aa14.05□□□□□ -0.16
COPS3-212ENST00000539941 OR6C3Q9NZP0 311 aa14.05□□□□□ -0.16
COPS3-212ENST00000539941 OR1A1Q9P1Q5 309 aa14.05□□□□□ -0.16
COPS3-212ENST00000539941 IGKV1D-13A0A0B4J2D9 117 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 SPINT2O43291 252 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 FSTL3O95633 263 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 IGHV2-5P01817 119 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 RNF224P0DH78 156 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 IGKV1-13P0DP09 117 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 S100GP29377 79 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 GPX4P36969 197 aaPredicted RBP14.04□□□□□ -0.16
COPS3-212ENST00000539941 NPBWR1P48145 328 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 FABP9Q0Z7S8 132 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 ANKRD55Q3KP44 614 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 PHLDA2Q53GA4 152 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 DCAF12L2Q5VW00 463 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 CMTM1Q8IZ96 169 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 PRR18Q8N4B5 295 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 DEFB108BQ8NET1 73 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 OR10V1Q8NGI7 309 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 OR13A1Q8NGR1 328 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 CCL17Q92583 94 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 SAT2Q96F10 170 aaPredicted RBP14.04□□□□□ -0.16
COPS3-212ENST00000539941 C14orf79Q96F83 325 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 SPTAN1Q13813 2472 aaKnown RBP14.04□□□□□ -0.16
COPS3-212ENST00000539941 SPTBN1Q01082 2364 aaKnown RBP14.04□□□□□ -0.16
COPS3-212ENST00000539941 AP4M1O00189 453 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 GOSR1O95249 250 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 GYPAP02724 150 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 HTD2P86397 168 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 SSX9Q7RTT3 188 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 INO80EQ8NBZ0 244 aaPredicted RBP14.04□□□□□ -0.16
COPS3-212ENST00000539941 OR1L1Q8NH94 360 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 FAM216AQ8WUB2 273 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 CCL13Q99616 98 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 RAB1BQ9H0U4 201 aa14.04□□□□□ -0.16
COPS3-212ENST00000539941 C15orf65H3BRN8 121 aa14.03□□□□□ -0.16
COPS3-212ENST00000539941 MPPED1O15442 326 aa14.03□□□□□ -0.16
COPS3-212ENST00000539941 CEACAM6P40199 344 aa14.03□□□□□ -0.16
COPS3-212ENST00000539941 TAS2R60P59551 318 aa14.03□□□□□ -0.16
COPS3-212ENST00000539941 SPCS3P61009 180 aa14.03□□□□□ -0.16
COPS3-212ENST00000539941 EIF5AP63241 154 aaKnown RBP14.03□□□□□ -0.16
COPS3-212ENST00000539941 C11orf71Q6IPW1 123 aa14.03□□□□□ -0.16
COPS3-212ENST00000539941 DTX2Q86UW9 622 aa14.03□□□□□ -0.16
COPS3-212ENST00000539941 TPRX1Q8N7U7 411 aa14.03□□□□□ -0.16
COPS3-212ENST00000539941 LRTM2Q8N967 370 aa14.03□□□□□ -0.16
COPS3-212ENST00000539941 NINJ1Q92982 152 aa14.03□□□□□ -0.16
COPS3-212ENST00000539941 AKR1E2Q96JD6 320 aa14.03□□□□□ -0.16
COPS3-212ENST00000539941 KIAA2026Q5HYC2 2103 aa14.03□□□□□ -0.16
COPS3-212ENST00000539941 F5H0A9 414 aaPredicted RBP14.02□□□□□ -0.16
COPS3-212ENST00000539941 SLC31A2O15432 143 aa14.02□□□□□ -0.16
COPS3-212ENST00000539941 CLN5O75503 358 aa14.02□□□□□ -0.16
COPS3-212ENST00000539941 WNT2P09544 360 aa14.02□□□□□ -0.16
COPS3-212ENST00000539941 EDDM3BP56851 147 aa14.02□□□□□ -0.16
COPS3-212ENST00000539941 SRPXP78539 464 aa14.02□□□□□ -0.16
COPS3-212ENST00000539941 CYCSP99999 105 aaKnown RBP14.02□□□□□ -0.16
COPS3-212ENST00000539941 TMEM187Q14656 261 aa14.02□□□□□ -0.16
COPS3-212ENST00000539941 MSMO1Q15800 293 aa14.02□□□□□ -0.16
COPS3-212ENST00000539941 ZNF818PQ6ZRF7 136 aa14.02□□□□□ -0.16
COPS3-212ENST00000539941 ARL6IP6Q8N6S5 226 aa14.02□□□□□ -0.16
COPS3-212ENST00000539941 CCL28Q9NRJ3 127 aa14.02□□□□□ -0.16
COPS3-212ENST00000539941 KPTNQ9Y664 436 aa14.02□□□□□ -0.16
COPS3-212ENST00000539941 RAI1Q7Z5J4 1906 aaPredicted RBP14.02□□□□□ -0.16
COPS3-212ENST00000539941 MAST4O15021 2626 aa14.02□□□□□ -0.17
COPS3-212ENST00000539941 C19orf84I3L1E1 186 aa14.01□□□□□ -0.17
COPS3-212ENST00000539941 TNFRSF13BO14836 293 aaPredicted RBP14.01□□□□□ -0.17
COPS3-212ENST00000539941 OR5AC1P0C628 307 aa14.01□□□□□ -0.17
COPS3-212ENST00000539941 DANCRP0C864 163 aa14.01□□□□□ -0.17
COPS3-212ENST00000539941 SSTR5P35346 364 aa14.01□□□□□ -0.17
COPS3-212ENST00000539941 EIF5AL1Q6IS14 154 aaKnown RBP14.01□□□□□ -0.17
COPS3-212ENST00000539941 HIST1H2BAQ96A08 127 aa14.01□□□□□ -0.17
COPS3-212ENST00000539941 KAAG1Q9UBP8 84 aa14.01□□□□□ -0.17
COPS3-212ENST00000539941 ABCA4P78363 2273 aa14.01□□□□□ -0.17
COPS3-212ENST00000539941 F2RL2O00254 374 aa14.01□□□□□ -0.17
COPS3-212ENST00000539941 CCSO14618 274 aa14.01□□□□□ -0.17
COPS3-212ENST00000539941 HSD17B6O14756 317 aa14.01□□□□□ -0.17
COPS3-212ENST00000539941 TMPRSS2O15393 492 aa14.01□□□□□ -0.17
COPS3-212ENST00000539941 MRPS11P82912 194 aaKnown RBP14.01□□□□□ -0.17
COPS3-212ENST00000539941 SSX2Q16385 188 aa14.01□□□□□ -0.17
COPS3-212ENST00000539941 TMEM30BQ3MIR4 351 aa14.01□□□□□ -0.17
COPS3-212ENST00000539941 LIAT1Q6ZQX7 453 aa14.01□□□□□ -0.17
COPS3-212ENST00000539941 C1QL4Q86Z23 238 aa14.01□□□□□ -0.17
COPS3-212ENST00000539941 FAM216BQ8N7L0 139 aa14.01□□□□□ -0.17
COPS3-212ENST00000539941 ZBTB34Q8NCN2 500 aa14.01□□□□□ -0.17
COPS3-212ENST00000539941 UBALD1Q8TB05 177 aa14.01□□□□□ -0.17
COPS3-212ENST00000539941 NEU4Q8WWR8 484 aaPredicted RBP14.01□□□□□ -0.17
COPS3-212ENST00000539941 NMES1Q9C002 83 aa14.01□□□□□ -0.17
COPS3-212ENST00000539941 GFOD1Q9NXC2 390 aa14.01□□□□□ -0.17
COPS3-212ENST00000539941 JPT1Q9UK76 154 aa14.01□□□□□ -0.17
COPS3-212ENST00000539941 NAV2Q8IVL1 2488 aa14□□□□□ -0.17
COPS3-212ENST00000539941 TRGV10A0A0A0MS01 117 aa14□□□□□ -0.17
COPS3-212ENST00000539941 PIGBOS1A0A0B4J2F0 54 aa14□□□□□ -0.17
COPS3-212ENST00000539941 C3orf85A0A1B0GTC6 90 aa14□□□□□ -0.17
COPS3-212ENST00000539941 TXNL1O43396 289 aa14□□□□□ -0.17
COPS3-212ENST00000539941 IFNA17P01571 189 aa14□□□□□ -0.17
COPS3-212ENST00000539941 CGB3P0DN86 165 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms