RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 FBXL3Q9UKT7 428 aa2.82□□□□□ -1.96
TRAV11-201ENST00000539512 ERBINQ96RT1 1412 aa2.82□□□□□ -1.96
TRAV11-201ENST00000539512 NRXN1Q9ULB1 1477 aa2.82□□□□□ -1.96
TRAV11-201ENST00000539512 CDC42BPGQ6DT37 1551 aa2.82□□□□□ -1.96
TRAV11-201ENST00000539512 LRRC37A3O60309 1634 aa2.82□□□□□ -1.96
TRAV11-201ENST00000539512 NRXN3Q9Y4C0 1643 aa2.82□□□□□ -1.96
TRAV11-201ENST00000539512 TNRC6CQ9HCJ0 1690 aaKnown RBP2.82□□□□□ -1.96
TRAV11-201ENST00000539512 PARP4Q9UKK3 1724 aaKnown RBP2.82□□□□□ -1.96
TRAV11-201ENST00000539512 TRGV4A0A0C4DH28 118 aa2.81□□□□□ -1.96
TRAV11-201ENST00000539512 LOC102725191A0A1B0GVB3 256 aa2.81□□□□□ -1.96
TRAV11-201ENST00000539512 TMED1Q13445 227 aa2.81□□□□□ -1.96
TRAV11-201ENST00000539512 ZNF567Q8N184 647 aa2.81□□□□□ -1.96
TRAV11-201ENST00000539512 CD200R1Q8TD46 325 aa2.81□□□□□ -1.96
TRAV11-201ENST00000539512 LRRC45Q96CN5 670 aa2.81□□□□□ -1.96
TRAV11-201ENST00000539512 CHST5Q9GZS9 411 aa2.81□□□□□ -1.96
TRAV11-201ENST00000539512 C11orf49Q9H6J7 331 aa2.81□□□□□ -1.96
TRAV11-201ENST00000539512 ZNF337Q9Y3M9 751 aa2.81□□□□□ -1.96
TRAV11-201ENST00000539512 BCL9O00512 1426 aa2.81□□□□□ -1.96
TRAV11-201ENST00000539512 CASKIN1Q8WXD9 1431 aa2.81□□□□□ -1.96
TRAV11-201ENST00000539512 ZSWIM8A7E2V4 1837 aa2.81□□□□□ -1.96
TRAV11-201ENST00000539512 PRR14LQ5THK1 2151 aa2.81□□□□□ -1.96
TRAV11-201ENST00000539512 ZNF407Q9C0G0 2248 aa2.81□□□□□ -1.96
TRAV11-201ENST00000539512 TTC28Q96AY4 2481 aa2.81□□□□□ -1.96
TRAV11-201ENST00000539512 EYSQ5T1H1 3165 aa2.81□□□□□ -1.96
TRAV11-201ENST00000539512 CHD8Q9HCK8 2581 aa2.8□□□□□ -1.96
TRAV11-201ENST00000539512 EEA1Q15075 1411 aa2.8□□□□□ -1.96
TRAV11-201ENST00000539512 RAB3GAP2Q9H2M9 1393 aa2.8□□□□□ -1.96
TRAV11-201ENST00000539512 ERICH2A1L162 156 aa2.8□□□□□ -1.96
TRAV11-201ENST00000539512 CRYGDP07320 174 aa2.8□□□□□ -1.96
TRAV11-201ENST00000539512 PSMD8P48556 350 aa2.8□□□□□ -1.96
TRAV11-201ENST00000539512 DEFA6Q01524 100 aa2.8□□□□□ -1.96
TRAV11-201ENST00000539512 EXOC3L4Q17RC7 722 aa2.8□□□□□ -1.96
TRAV11-201ENST00000539512 DYNC2LI1Q8TCX1 351 aa2.8□□□□□ -1.96
TRAV11-201ENST00000539512 MED18Q9BUE0 208 aa2.8□□□□□ -1.96
TRAV11-201ENST00000539512 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.8□□□□□ -1.96
TRAV11-201ENST00000539512 ALG5Q9Y673 324 aa2.8□□□□□ -1.96
TRAV11-201ENST00000539512 CASP8AP2Q9UKL3 1982 aa2.8□□□□□ -1.96
TRAV11-201ENST00000539512 MYO5BQ9ULV0 1848 aa2.79□□□□□ -1.96
TRAV11-201ENST00000539512 LAMA2P24043 3122 aaKnown RBP2.79□□□□□ -1.96
TRAV11-201ENST00000539512 KDELR2P33947 212 aa2.79□□□□□ -1.96
TRAV11-201ENST00000539512 SLC35A2P78381 396 aa2.79□□□□□ -1.96
TRAV11-201ENST00000539512 BSPH1Q075Z2 132 aa2.79□□□□□ -1.96
TRAV11-201ENST00000539512 HES3Q5TGS1 186 aa2.79□□□□□ -1.96
TRAV11-201ENST00000539512 DOLPP1Q86YN1 238 aa2.79□□□□□ -1.96
TRAV11-201ENST00000539512 CRLF3Q8IUI8 442 aa2.79□□□□□ -1.96
TRAV11-201ENST00000539512 OR5AK3PQ8NH89 298 aa2.79□□□□□ -1.96
TRAV11-201ENST00000539512 CAPZA3Q96KX2 299 aa2.79□□□□□ -1.96
TRAV11-201ENST00000539512 CFAP53Q96M91 514 aa2.79□□□□□ -1.96
TRAV11-201ENST00000539512 GTSF1LQ9H1H1 148 aa2.79□□□□□ -1.96
TRAV11-201ENST00000539512 OR52A5Q9H2C5 316 aa2.79□□□□□ -1.96
TRAV11-201ENST00000539512 METTL17Q9H7H0 456 aaPredicted RBP2.79□□□□□ -1.96
TRAV11-201ENST00000539512 ASCL3Q9NQ33 180 aa2.79□□□□□ -1.96
TRAV11-201ENST00000539512 BAHCC1Q9P281 2608 aa2.78□□□□□ -1.96
TRAV11-201ENST00000539512 PIEZO1Q92508 2521 aa2.78□□□□□ -1.96
TRAV11-201ENST00000539512 IGKV1-12A0A0C4DH73 117 aa2.78□□□□□ -1.96
TRAV11-201ENST00000539512 C17orf51A8MQB3 221 aa2.78□□□□□ -1.96
TRAV11-201ENST00000539512 HSBP1L1C9JCN9 74 aa2.78□□□□□ -1.96
TRAV11-201ENST00000539512 F5H5K5 113 aa2.78□□□□□ -1.96
TRAV11-201ENST00000539512 IGKV1D-12P01611 117 aa2.78□□□□□ -1.96
TRAV11-201ENST00000539512 PSMD7P51665 324 aa2.78□□□□□ -1.96
TRAV11-201ENST00000539512 DLX6P56179 175 aa2.78□□□□□ -1.96
TRAV11-201ENST00000539512 FAM3AP98173 230 aa2.78□□□□□ -1.96
TRAV11-201ENST00000539512 HTR4Q13639 388 aa2.78□□□□□ -1.96
TRAV11-201ENST00000539512 VN1R4Q7Z5H5 301 aa2.78□□□□□ -1.96
TRAV11-201ENST00000539512 ZNRF2Q8NHG8 242 aa2.78□□□□□ -1.96
TRAV11-201ENST00000539512 ERMNQ8TAM6 284 aa2.78□□□□□ -1.96
TRAV11-201ENST00000539512 RNASEH2CQ8TDP1 164 aaKnown RBP2.78□□□□□ -1.96
TRAV11-201ENST00000539512 SMIM12Q96EX1 92 aa2.78□□□□□ -1.96
TRAV11-201ENST00000539512 FAM210AQ96ND0 272 aa2.78□□□□□ -1.96
TRAV11-201ENST00000539512 CHMP4BQ9H444 224 aaKnown RBP2.78□□□□□ -1.96
TRAV11-201ENST00000539512 PKD1L3Q7Z443 1732 aa2.78□□□□□ -1.96
TRAV11-201ENST00000539512 CACNA1DQ01668 2161 aa2.78□□□□□ -1.96
TRAV11-201ENST00000539512 KIF1AQ12756 1690 aa2.78□□□□□ -1.96
TRAV11-201ENST00000539512 TMEM131Q92545 1883 aa2.77□□□□□ -1.97
TRAV11-201ENST00000539512 KDM6AO15550 1401 aaPredicted RBP2.77□□□□□ -1.97
TRAV11-201ENST00000539512 VIRMAQ69YN4 1812 aaKnown RBP2.77□□□□□ -1.97
TRAV11-201ENST00000539512 C9J4A7 227 aa2.77□□□□□ -1.97
TRAV11-201ENST00000539512 J3QKU1 62 aa2.77□□□□□ -1.97
TRAV11-201ENST00000539512 M0QYV0 167 aa2.77□□□□□ -1.97
TRAV11-201ENST00000539512 MPZL2O60487 215 aa2.77□□□□□ -1.97
TRAV11-201ENST00000539512 GP1BAP07359 652 aa2.77□□□□□ -1.97
TRAV11-201ENST00000539512 F8A1P23610 371 aa2.77□□□□□ -1.97
TRAV11-201ENST00000539512 LPAR6P43657 344 aa2.77□□□□□ -1.97
TRAV11-201ENST00000539512 KRTAP12-4P60329 112 aa2.77□□□□□ -1.97
TRAV11-201ENST00000539512 KRTAP5-2Q701N4 177 aa2.77□□□□□ -1.97
TRAV11-201ENST00000539512 ZNF767PQ75MW2 155 aa2.77□□□□□ -1.97
TRAV11-201ENST00000539512 C2orf73Q8N5S3 287 aaPredicted RBP2.77□□□□□ -1.97
TRAV11-201ENST00000539512 ZFAND2AQ8N6M9 145 aa2.77□□□□□ -1.97
TRAV11-201ENST00000539512 Q8NDZ9 215 aa2.77□□□□□ -1.97
TRAV11-201ENST00000539512 MGLLQ99685 303 aa2.77□□□□□ -1.97
TRAV11-201ENST00000539512 GLS2Q9UI32 602 aa2.77□□□□□ -1.97
TRAV11-201ENST00000539512 DNAJC12Q9UKB3 198 aa2.77□□□□□ -1.97
TRAV11-201ENST00000539512 SBF2Q86WG5 1849 aa2.77□□□□□ -1.97
TRAV11-201ENST00000539512 CEP290O15078 2479 aa2.77□□□□□ -1.97
TRAV11-201ENST00000539512 PRUNE2Q8WUY3 3088 aa2.77□□□□□ -1.97
TRAV11-201ENST00000539512 DYSFO75923 2080 aa2.77□□□□□ -1.97
TRAV11-201ENST00000539512 PPIP5K1Q6PFW1 1433 aa2.76□□□□□ -1.97
TRAV11-201ENST00000539512 COL24A1Q17RW2 1714 aa2.76□□□□□ -1.97
TRAV11-201ENST00000539512 CPDO75976 1380 aa2.76□□□□□ -1.97
TRAV11-201ENST00000539512 PLXNB3Q9ULL4 1909 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms