RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 MOGAT2Q3SYC2 334 aa9.07□□□□□ -0.96
RTN3-209ENST00000538995 KCTD21Q4G0X4 260 aa9.07□□□□□ -0.96
RTN3-209ENST00000538995 FAM131AQ6UXB0 335 aa9.07□□□□□ -0.96
RTN3-209ENST00000538995 Q6ZS49 121 aa9.07□□□□□ -0.96
RTN3-209ENST00000538995 MRPL41Q8IXM3 137 aaKnown RBP9.07□□□□□ -0.96
RTN3-209ENST00000538995 ABHD14BQ96IU4 210 aa9.07□□□□□ -0.96
RTN3-209ENST00000538995 KCTD7Q96MP8 289 aa9.07□□□□□ -0.96
RTN3-209ENST00000538995 P2RX4Q99571 388 aa9.07□□□□□ -0.96
RTN3-209ENST00000538995 MCRIP2Q9BUT9 160 aaKnown RBP9.07□□□□□ -0.96
RTN3-209ENST00000538995 OR51J1Q9H342 316 aa9.07□□□□□ -0.96
RTN3-209ENST00000538995 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.07□□□□□ -0.96
RTN3-209ENST00000538995 RDH8Q9NYR8 311 aa9.07□□□□□ -0.96
RTN3-209ENST00000538995 ZNF221Q9UK13 617 aa9.07□□□□□ -0.96
RTN3-209ENST00000538995 WASHC3Q9Y3C0 194 aa9.07□□□□□ -0.96
RTN3-209ENST00000538995 IGHV7-81A0A0B4J1V7 117 aa9.06□□□□□ -0.96
RTN3-209ENST00000538995 RRHO14718 337 aa9.06□□□□□ -0.96
RTN3-209ENST00000538995 SPDEFO95238 335 aa9.06□□□□□ -0.96
RTN3-209ENST00000538995 RPLP1P05386 114 aaKnown RBP9.06□□□□□ -0.96
RTN3-209ENST00000538995 GNB3P16520 340 aa9.06□□□□□ -0.96
RTN3-209ENST00000538995 DTYMKP23919 212 aa9.06□□□□□ -0.96
RTN3-209ENST00000538995 CNTFRP26992 372 aa9.06□□□□□ -0.96
RTN3-209ENST00000538995 PSMB8P28062 276 aa9.06□□□□□ -0.96
RTN3-209ENST00000538995 CRIP2P52943 208 aaPredicted RBP9.06□□□□□ -0.96
RTN3-209ENST00000538995 SCAND1P57086 179 aa9.06□□□□□ -0.96
RTN3-209ENST00000538995 FOXB2Q5VYV0 432 aa9.06□□□□□ -0.96
RTN3-209ENST00000538995 LIN54Q6MZP7 749 aa9.06□□□□□ -0.96
RTN3-209ENST00000538995 C8orf86Q6ZUL3 223 aa9.06□□□□□ -0.96
RTN3-209ENST00000538995 OR8U1Q8NH10 309 aa9.06□□□□□ -0.96
RTN3-209ENST00000538995 MYOZ3Q8TDC0 251 aa9.06□□□□□ -0.96
RTN3-209ENST00000538995 RITA1Q96K30 269 aa9.06□□□□□ -0.96
RTN3-209ENST00000538995 TRBV6-7A0A0A0MS04 114 aa9.05□□□□□ -0.96
RTN3-209ENST00000538995 A0A0B4J203 849 aa9.05□□□□□ -0.96
RTN3-209ENST00000538995 H7C2Y5 167 aa9.05□□□□□ -0.96
RTN3-209ENST00000538995 ATP6V0E1O15342 81 aa9.05□□□□□ -0.96
RTN3-209ENST00000538995 APOA2P02652 100 aa9.05□□□□□ -0.96
RTN3-209ENST00000538995 TFAP2AP05549 437 aa9.05□□□□□ -0.96
RTN3-209ENST00000538995 GSTP1P09211 210 aaKnown RBP9.05□□□□□ -0.96
RTN3-209ENST00000538995 PPIFP30405 207 aaKnown RBP9.05□□□□□ -0.96
RTN3-209ENST00000538995 TALDO1P37837 337 aa9.05□□□□□ -0.96
RTN3-209ENST00000538995 ZNF660Q6AZW8 331 aaPredicted RBP9.05□□□□□ -0.96
RTN3-209ENST00000538995 SFXN4Q6P4A7 337 aa9.05□□□□□ -0.96
RTN3-209ENST00000538995 C18orf65Q6ZTR6 163 aa9.05□□□□□ -0.96
RTN3-209ENST00000538995 PDPNQ86YL7 162 aa9.05□□□□□ -0.96
RTN3-209ENST00000538995 TCTEX1D1Q8N7M0 179 aa9.05□□□□□ -0.96
RTN3-209ENST00000538995 OR10J5Q8NHC4 309 aa9.05□□□□□ -0.96
RTN3-209ENST00000538995 C4orf3Q8WVX3 66 aa9.05□□□□□ -0.96
RTN3-209ENST00000538995 DPF1Q92782 380 aa9.05□□□□□ -0.96
RTN3-209ENST00000538995 RBMXL1Q96E39 390 aaKnown RBP9.05□□□□□ -0.96
RTN3-209ENST00000538995 ATG5Q9H1Y0 275 aa9.05□□□□□ -0.96
RTN3-209ENST00000538995 PARP11Q9NR21 331 aa9.05□□□□□ -0.96
RTN3-209ENST00000538995 AURKAIP1Q9NWT8 199 aaPredicted RBP9.05□□□□□ -0.96
RTN3-209ENST00000538995 GAB2Q9UQC2 676 aa9.05□□□□□ -0.96
RTN3-209ENST00000538995 A0A075B6Q4 140 aa9.04□□□□□ -0.96
RTN3-209ENST00000538995 TRAV41A0A0B4J266 112 aa9.04□□□□□ -0.96
RTN3-209ENST00000538995 CCL24O00175 119 aa9.04□□□□□ -0.96
RTN3-209ENST00000538995 BET1O15155 118 aa9.04□□□□□ -0.96
RTN3-209ENST00000538995 TMEM127O75204 238 aa9.04□□□□□ -0.96
RTN3-209ENST00000538995 PROP1O75360 226 aa9.04□□□□□ -0.96
RTN3-209ENST00000538995 IGLV1-40P01703 118 aa9.04□□□□□ -0.96
RTN3-209ENST00000538995 PITPNAQ00169 270 aa9.04□□□□□ -0.96
RTN3-209ENST00000538995 TAGLNQ01995 201 aaKnown RBP9.04□□□□□ -0.96
RTN3-209ENST00000538995 EGFEM1PQ0D2K5 195 aa9.04□□□□□ -0.96
RTN3-209ENST00000538995 ARFRP1Q13795 201 aa9.04□□□□□ -0.96
RTN3-209ENST00000538995 PLGLAQ15195 96 aa9.04□□□□□ -0.96
RTN3-209ENST00000538995 IGSF11Q5DX21 431 aa9.04□□□□□ -0.96
RTN3-209ENST00000538995 GLDNQ6ZMI3 551 aaPredicted RBP9.04□□□□□ -0.96
RTN3-209ENST00000538995 ZNF383Q8NA42 475 aa9.04□□□□□ -0.96
RTN3-209ENST00000538995 MINDY2Q8NBR6 621 aa9.04□□□□□ -0.96
RTN3-209ENST00000538995 RAX2Q96IS3 184 aa9.04□□□□□ -0.96
RTN3-209ENST00000538995 TSNAXQ99598 290 aaKnown RBP9.04□□□□□ -0.96
RTN3-209ENST00000538995 OR2D2Q9H210 308 aa9.04□□□□□ -0.96
RTN3-209ENST00000538995 OR51E2Q9H255 320 aa9.04□□□□□ -0.96
RTN3-209ENST00000538995 DCSTAMPQ9H295 470 aa9.04□□□□□ -0.96
RTN3-209ENST00000538995 FBXL15Q9H469 300 aa9.04□□□□□ -0.96
RTN3-209ENST00000538995 DAPK2Q9UIK4 370 aa9.04□□□□□ -0.96
RTN3-209ENST00000538995 RNF150Q9ULK6 438 aa9.04□□□□□ -0.96
RTN3-209ENST00000538995 RRP15Q9Y3B9 282 aaKnown RBP9.04□□□□□ -0.96
RTN3-209ENST00000538995 SMIM30A4D0T7 59 aa9.03□□□□□ -0.96
RTN3-209ENST00000538995 M0R1X1 148 aa9.03□□□□□ -0.96
RTN3-209ENST00000538995 PRB2P02812 416 aaPredicted RBP9.03□□□□□ -0.96
RTN3-209ENST00000538995 IGKV1-16P04430 117 aa9.03□□□□□ -0.96
RTN3-209ENST00000538995 GSTT2P0CG29 244 aa9.03□□□□□ -0.96
RTN3-209ENST00000538995 GSTT2BP0CG30 244 aa9.03□□□□□ -0.96
RTN3-209ENST00000538995 SDC2P34741 201 aa9.03□□□□□ -0.96
RTN3-209ENST00000538995 CX3CL1P78423 397 aa9.03□□□□□ -0.96
RTN3-209ENST00000538995 NDPQ00604 133 aa9.03□□□□□ -0.96
RTN3-209ENST00000538995 RUNX1Q01196 453 aa9.03□□□□□ -0.96
RTN3-209ENST00000538995 FHL3Q13643 280 aa9.03□□□□□ -0.96
RTN3-209ENST00000538995 NEDD8Q15843 81 aa9.03□□□□□ -0.96
RTN3-209ENST00000538995 TIMM50Q3ZCQ8 353 aa9.03□□□□□ -0.96
RTN3-209ENST00000538995 CDNFQ49AH0 187 aa9.03□□□□□ -0.96
RTN3-209ENST00000538995 C19orf54Q5BKX5 351 aa9.03□□□□□ -0.96
RTN3-209ENST00000538995 HACD4Q5VWC8 232 aa9.03□□□□□ -0.96
RTN3-209ENST00000538995 TMEM65Q6PI78 240 aa9.03□□□□□ -0.96
RTN3-209ENST00000538995 LCNL1Q6ZST4 164 aa9.03□□□□□ -0.96
RTN3-209ENST00000538995 LGALS14Q8TCE9 139 aa9.03□□□□□ -0.96
RTN3-209ENST00000538995 MRAPQ8TCY5 172 aa9.03□□□□□ -0.96
RTN3-209ENST00000538995 UBE2E2Q96LR5 201 aa9.03□□□□□ -0.96
RTN3-209ENST00000538995 GINS4Q9BRT9 223 aa9.03□□□□□ -0.96
RTN3-209ENST00000538995 ZMAT5Q9UDW3 170 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms