RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 S1PR3Q99500 378 aa9.8□□□□□ -0.84
PRKDC-207ENST00000536483 CMSS1Q9BQ75 279 aaKnown RBP9.8□□□□□ -0.84
PRKDC-207ENST00000536483 CHCHD6Q9BRQ6 235 aa9.8□□□□□ -0.84
PRKDC-207ENST00000536483 GAB2Q9UQC2 676 aa9.8□□□□□ -0.84
PRKDC-207ENST00000536483 TENM3Q9P273 2699 aa9.8□□□□□ -0.84
PRKDC-207ENST00000536483 IGHV3-72A0A0B4J1Y9 119 aa9.79□□□□□ -0.84
PRKDC-207ENST00000536483 METTL21EPA6NDL7 271 aa9.79□□□□□ -0.84
PRKDC-207ENST00000536483 SERPINE3A8MV23 424 aa9.79□□□□□ -0.84
PRKDC-207ENST00000536483 TRDCB7Z8K6 153 aa9.79□□□□□ -0.84
PRKDC-207ENST00000536483 MFNGO00587 321 aa9.79□□□□□ -0.84
PRKDC-207ENST00000536483 RAB29O14966 203 aa9.79□□□□□ -0.84
PRKDC-207ENST00000536483 TMEM127O75204 238 aa9.79□□□□□ -0.84
PRKDC-207ENST00000536483 ZBTB25P24278 435 aa9.79□□□□□ -0.84
PRKDC-207ENST00000536483 SLC6A1P30531 599 aa9.79□□□□□ -0.84
PRKDC-207ENST00000536483 GPR12P47775 334 aa9.79□□□□□ -0.84
PRKDC-207ENST00000536483 SCAND1P57086 179 aa9.79□□□□□ -0.84
PRKDC-207ENST00000536483 CD69Q07108 199 aa9.79□□□□□ -0.84
PRKDC-207ENST00000536483 ARL6IP1Q15041 203 aa9.79□□□□□ -0.84
PRKDC-207ENST00000536483 RGS21Q2M5E4 152 aa9.79□□□□□ -0.84
PRKDC-207ENST00000536483 SLC35E3Q7Z769 313 aa9.79□□□□□ -0.84
PRKDC-207ENST00000536483 MRPL41Q8IXM3 137 aaKnown RBP9.79□□□□□ -0.84
PRKDC-207ENST00000536483 NPBQ8NG41 125 aa9.79□□□□□ -0.84
PRKDC-207ENST00000536483 EDARADDQ8WWZ3 215 aa9.79□□□□□ -0.84
PRKDC-207ENST00000536483 AP3S1Q92572 193 aa9.79□□□□□ -0.84
PRKDC-207ENST00000536483 RAB3CQ96E17 227 aa9.79□□□□□ -0.84
PRKDC-207ENST00000536483 KCTD7Q96MP8 289 aa9.79□□□□□ -0.84
PRKDC-207ENST00000536483 HDHD3Q9BSH5 251 aaPredicted RBP9.79□□□□□ -0.84
PRKDC-207ENST00000536483 CENPOQ9BU64 300 aa9.79□□□□□ -0.84
PRKDC-207ENST00000536483 CHMP1AQ9HD42 196 aaPredicted RBP9.79□□□□□ -0.84
PRKDC-207ENST00000536483 ZFP57Q9NU63 452 aa9.79□□□□□ -0.84
PRKDC-207ENST00000536483 SAA2-SAA4A0A096LPE2 208 aa9.78□□□□□ -0.84
PRKDC-207ENST00000536483 IGKV1-6A0A0C4DH72 117 aa9.78□□□□□ -0.84
PRKDC-207ENST00000536483 PSMB11A5LHX3 300 aa9.78□□□□□ -0.84
PRKDC-207ENST00000536483 AP4M1O00189 453 aa9.78□□□□□ -0.84
PRKDC-207ENST00000536483 PROP1O75360 226 aa9.78□□□□□ -0.84
PRKDC-207ENST00000536483 NDUFA3O95167 84 aa9.78□□□□□ -0.84
PRKDC-207ENST00000536483 IGF1P05019 195 aa9.78□□□□□ -0.84
PRKDC-207ENST00000536483 SCTP09683 121 aa9.78□□□□□ -0.84
PRKDC-207ENST00000536483 SAA2P0DJI9 122 aaPredicted RBP9.78□□□□□ -0.84
PRKDC-207ENST00000536483 HIST1H1DP16402 221 aaKnown RBP9.78□□□□□ -0.84
PRKDC-207ENST00000536483 F2RL1P55085 397 aa9.78□□□□□ -0.84
PRKDC-207ENST00000536483 MOGAT2Q3SYC2 334 aa9.78□□□□□ -0.84
PRKDC-207ENST00000536483 ETV3LQ6ZN32 361 aa9.78□□□□□ -0.84
PRKDC-207ENST00000536483 ZNF329Q86UD4 541 aa9.78□□□□□ -0.84
PRKDC-207ENST00000536483 FOXRED2Q8IWF2 684 aa9.78□□□□□ -0.84
PRKDC-207ENST00000536483 STPG2Q8N412 459 aa9.78□□□□□ -0.84
PRKDC-207ENST00000536483 MFSD4AQ8N468 514 aa9.78□□□□□ -0.84
PRKDC-207ENST00000536483 OR5AN1Q8NGI8 311 aa9.78□□□□□ -0.84
PRKDC-207ENST00000536483 OR4A4PQ8NGN8 299 aa9.78□□□□□ -0.84
PRKDC-207ENST00000536483 IL1F10Q8WWZ1 152 aa9.78□□□□□ -0.84
PRKDC-207ENST00000536483 DPF1Q92782 380 aa9.78□□□□□ -0.84
PRKDC-207ENST00000536483 RNF5Q99942 180 aa9.78□□□□□ -0.84
PRKDC-207ENST00000536483 CABLES2Q9BTV7 478 aa9.78□□□□□ -0.84
PRKDC-207ENST00000536483 GON7Q9BXV9 100 aa9.78□□□□□ -0.84
PRKDC-207ENST00000536483 C11orf54Q9H0W9 315 aaPredicted RBP9.78□□□□□ -0.84
PRKDC-207ENST00000536483 LINC01548A6NM66 108 aa9.77□□□□□ -0.85
PRKDC-207ENST00000536483 NCBP2LA6PVI3 153 aaKnown RBP9.77□□□□□ -0.85
PRKDC-207ENST00000536483 SCGNO76038 276 aa9.77□□□□□ -0.85
PRKDC-207ENST00000536483 CT45A6P0DMU7 189 aa9.77□□□□□ -0.85
PRKDC-207ENST00000536483 CT45A5P0DMU8 189 aa9.77□□□□□ -0.85
PRKDC-207ENST00000536483 CT45A7P0DMV0 189 aa9.77□□□□□ -0.85
PRKDC-207ENST00000536483 MC5RP33032 325 aa9.77□□□□□ -0.85
PRKDC-207ENST00000536483 CEACAM6P40199 344 aa9.77□□□□□ -0.85
PRKDC-207ENST00000536483 OR3A3P47888 321 aa9.77□□□□□ -0.85
PRKDC-207ENST00000536483 CFHR3Q02985 330 aa9.77□□□□□ -0.85
PRKDC-207ENST00000536483 KIR2DS1Q14954 304 aa9.77□□□□□ -0.85
PRKDC-207ENST00000536483 SPANXN2Q5MJ10 180 aa9.77□□□□□ -0.85
PRKDC-207ENST00000536483 C18orf65Q6ZTR6 163 aa9.77□□□□□ -0.85
PRKDC-207ENST00000536483 SLC25A46Q96AG3 418 aa9.77□□□□□ -0.85
PRKDC-207ENST00000536483 WWC2-AS2Q96NR7 200 aa9.77□□□□□ -0.85
PRKDC-207ENST00000536483 B9D2Q9BPU9 175 aa9.77□□□□□ -0.85
PRKDC-207ENST00000536483 RASL11BQ9BPW5 248 aa9.77□□□□□ -0.85
PRKDC-207ENST00000536483 CCDC32Q9BV29 185 aa9.77□□□□□ -0.85
PRKDC-207ENST00000536483 MRPL20Q9BYC9 149 aaKnown RBP9.77□□□□□ -0.85
PRKDC-207ENST00000536483 TRBV6-7A0A0A0MS04 114 aa9.76□□□□□ -0.85
PRKDC-207ENST00000536483 OR5H14A6NHG9 310 aa9.76□□□□□ -0.85
PRKDC-207ENST00000536483 ST8SIA5O15466 376 aa9.76□□□□□ -0.85
PRKDC-207ENST00000536483 FABP7O15540 132 aa9.76□□□□□ -0.85
PRKDC-207ENST00000536483 RBBP9O75884 186 aa9.76□□□□□ -0.85
PRKDC-207ENST00000536483 HLA-DRB1P01911 266 aa9.76□□□□□ -0.85
PRKDC-207ENST00000536483 FCGR3AP08637 254 aa9.76□□□□□ -0.85
PRKDC-207ENST00000536483 CD3GP09693 182 aa9.76□□□□□ -0.85
PRKDC-207ENST00000536483 SLC2A2P11168 524 aaPredicted RBP9.76□□□□□ -0.85
PRKDC-207ENST00000536483 DTYMKP23919 212 aa9.76□□□□□ -0.85
PRKDC-207ENST00000536483 PTBP1P26599 531 aaKnown RBP eCLIP9.76□□□□□ -0.85
PRKDC-207ENST00000536483 THBS3P49746 956 aa9.76□□□□□ -0.85
PRKDC-207ENST00000536483 ACTBP60709 375 aa9.76□□□□□ -0.85
PRKDC-207ENST00000536483 SLC35B1P78383 322 aa9.76□□□□□ -0.85
PRKDC-207ENST00000536483 PNLIPRP3Q17RR3 467 aa9.76□□□□□ -0.85
PRKDC-207ENST00000536483 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.76□□□□□ -0.85
PRKDC-207ENST00000536483 NOL4LQ96MY1 436 aaPredicted RBP9.76□□□□□ -0.85
PRKDC-207ENST00000536483 GPR61Q9BZJ8 451 aa9.76□□□□□ -0.85
PRKDC-207ENST00000536483 PARP12Q9H0J9 701 aaKnown RBP9.76□□□□□ -0.85
PRKDC-207ENST00000536483 OR1A1Q9P1Q5 309 aa9.76□□□□□ -0.85
PRKDC-207ENST00000536483 A0A0B4J203 849 aa9.75□□□□□ -0.85
PRKDC-207ENST00000536483 H0YJW9 148 aa9.75□□□□□ -0.85
PRKDC-207ENST00000536483 IGHG4P01861 327 aa9.75□□□□□ -0.85
PRKDC-207ENST00000536483 ELANEP08246 267 aa9.75□□□□□ -0.85
PRKDC-207ENST00000536483 SDC2P34741 201 aa9.75□□□□□ -0.85
PRKDC-207ENST00000536483 CRIP2P52943 208 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 206.1 ms