RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 DYNLT3P51808 116 aa13.17□□□□□ -0.3
VAMP1-205ENST00000535927 RAG2P55895 527 aa13.17□□□□□ -0.3
VAMP1-205ENST00000535927 KLF17Q5JT82 389 aaPredicted RBP13.17□□□□□ -0.3
VAMP1-205ENST00000535927 TPTE2P1Q5T6R2 138 aa13.17□□□□□ -0.3
VAMP1-205ENST00000535927 KCTD9Q7L273 389 aa13.17□□□□□ -0.3
VAMP1-205ENST00000535927 ODF3L1Q8IXM7 274 aa13.17□□□□□ -0.3
VAMP1-205ENST00000535927 CCDC71LQ8N9Z2 235 aa13.17□□□□□ -0.3
VAMP1-205ENST00000535927 POC5Q8NA72 575 aa13.17□□□□□ -0.3
VAMP1-205ENST00000535927 SECTM1Q8WVN6 248 aa13.17□□□□□ -0.3
VAMP1-205ENST00000535927 LEAP2Q969E1 77 aa13.17□□□□□ -0.3
VAMP1-205ENST00000535927 PRDM13Q9H4Q3 707 aa13.17□□□□□ -0.3
VAMP1-205ENST00000535927 FAM96BQ9Y3D0 163 aa13.17□□□□□ -0.3
VAMP1-205ENST00000535927 NSD1Q96L73 2696 aaPredicted RBP13.17□□□□□ -0.3
VAMP1-205ENST00000535927 SAA2-SAA4A0A096LPE2 208 aa13.16□□□□□ -0.3
VAMP1-205ENST00000535927 IGKV1D-13A0A0B4J2D9 117 aa13.16□□□□□ -0.3
VAMP1-205ENST00000535927 FBP1P09467 338 aa13.16□□□□□ -0.3
VAMP1-205ENST00000535927 SAA2P0DJI9 122 aaPredicted RBP13.16□□□□□ -0.3
VAMP1-205ENST00000535927 IGKV1-13P0DP09 117 aa13.16□□□□□ -0.3
VAMP1-205ENST00000535927 PGAM2P15259 253 aa13.16□□□□□ -0.3
VAMP1-205ENST00000535927 BRS3P32247 399 aa13.16□□□□□ -0.3
VAMP1-205ENST00000535927 SAA4P35542 130 aa13.16□□□□□ -0.3
VAMP1-205ENST00000535927 THBS3P49746 956 aa13.16□□□□□ -0.3
VAMP1-205ENST00000535927 TAS2R31P59538 309 aa13.16□□□□□ -0.3
VAMP1-205ENST00000535927 FXYD4P59646 89 aa13.16□□□□□ -0.3
VAMP1-205ENST00000535927 CATR1Q13166 79 aa13.16□□□□□ -0.3
VAMP1-205ENST00000535927 KLRD1Q13241 179 aa13.16□□□□□ -0.3
VAMP1-205ENST00000535927 ABCA11PQ4W5N1 156 aa13.16□□□□□ -0.3
VAMP1-205ENST00000535927 THNSL2Q86YJ6 484 aa13.16□□□□□ -0.3
VAMP1-205ENST00000535927 TGIF2LXQ8IUE1 241 aa13.16□□□□□ -0.3
VAMP1-205ENST00000535927 DRAM1Q8N682 238 aa13.16□□□□□ -0.3
VAMP1-205ENST00000535927 OR13C8Q8NGS7 320 aa13.16□□□□□ -0.3
VAMP1-205ENST00000535927 ENKURQ8TC29 256 aa13.16□□□□□ -0.3
VAMP1-205ENST00000535927 CD300LFQ8TDQ1 290 aa13.16□□□□□ -0.3
VAMP1-205ENST00000535927 TOMM40LQ969M1 308 aa13.16□□□□□ -0.3
VAMP1-205ENST00000535927 ALX4Q9H161 411 aaPredicted RBP13.16□□□□□ -0.3
VAMP1-205ENST00000535927 SDHAF2Q9NX18 166 aa13.16□□□□□ -0.3
VAMP1-205ENST00000535927 PRELID3BQ9Y3B1 194 aa13.16□□□□□ -0.3
VAMP1-205ENST00000535927 LINC00854A0A1B0GVQ3 168 aa13.15□□□□□ -0.3
VAMP1-205ENST00000535927 VGLL3A8MV65 326 aa13.15□□□□□ -0.3
VAMP1-205ENST00000535927 HSD17B6O14756 317 aa13.15□□□□□ -0.3
VAMP1-205ENST00000535927 SLC31A2O15432 143 aa13.15□□□□□ -0.3
VAMP1-205ENST00000535927 TCRBP04435 133 aa13.15□□□□□ -0.3
VAMP1-205ENST00000535927 IGHV4-38-2P0DP08 117 aa13.15□□□□□ -0.3
VAMP1-205ENST00000535927 SRP14P37108 136 aaKnown RBP13.15□□□□□ -0.3
VAMP1-205ENST00000535927 KIR2DS2P43631 304 aa13.15□□□□□ -0.3
VAMP1-205ENST00000535927 FAAP20Q6NZ36 180 aa13.15□□□□□ -0.3
VAMP1-205ENST00000535927 PIP4P2Q8N4L2 257 aa13.15□□□□□ -0.3
VAMP1-205ENST00000535927 MINDY2Q8NBR6 621 aa13.15□□□□□ -0.3
VAMP1-205ENST00000535927 RTN4IP1Q8WWV3 396 aaPredicted RBP13.15□□□□□ -0.3
VAMP1-205ENST00000535927 ABHD14BQ96IU4 210 aa13.15□□□□□ -0.3
VAMP1-205ENST00000535927 RNF5Q99942 180 aa13.15□□□□□ -0.3
VAMP1-205ENST00000535927 ZNF251Q9BRH9 671 aa13.15□□□□□ -0.3
VAMP1-205ENST00000535927 AIFM2Q9BRQ8 373 aa13.15□□□□□ -0.3
VAMP1-205ENST00000535927 BEX2Q9BXY8 128 aa13.15□□□□□ -0.3
VAMP1-205ENST00000535927 PARP12Q9H0J9 701 aaKnown RBP13.15□□□□□ -0.3
VAMP1-205ENST00000535927 FXYD6Q9H0Q3 95 aa13.15□□□□□ -0.3
VAMP1-205ENST00000535927 GSX1Q9H4S2 264 aaPredicted RBP13.15□□□□□ -0.3
VAMP1-205ENST00000535927 RNF150Q9ULK6 438 aa13.15□□□□□ -0.3
VAMP1-205ENST00000535927 NUBP2Q9Y5Y2 271 aa13.15□□□□□ -0.3
VAMP1-205ENST00000535927 VPS13CQ709C8 3753 aa13.14□□□□□ -0.31
VAMP1-205ENST00000535927 A0A1W2PPE3 182 aa13.14□□□□□ -0.31
VAMP1-205ENST00000535927 IGHV3-7P01780 117 aa13.14□□□□□ -0.31
VAMP1-205ENST00000535927 CD1BP29016 333 aa13.14□□□□□ -0.31
VAMP1-205ENST00000535927 BTCP35070 178 aa13.14□□□□□ -0.31
VAMP1-205ENST00000535927 HABP2Q14520 560 aaPredicted RBP13.14□□□□□ -0.31
VAMP1-205ENST00000535927 RGS21Q2M5E4 152 aa13.14□□□□□ -0.31
VAMP1-205ENST00000535927 TUSC1Q2TAM9 212 aa13.14□□□□□ -0.31
VAMP1-205ENST00000535927 TMEM128Q5BJH2 165 aa13.14□□□□□ -0.31
VAMP1-205ENST00000535927 MARCH1Q8TCQ1 289 aa13.14□□□□□ -0.31
VAMP1-205ENST00000535927 CCL28Q9NRJ3 127 aa13.14□□□□□ -0.31
VAMP1-205ENST00000535927 KCNIP3Q9Y2W7 256 aa13.14□□□□□ -0.31
VAMP1-205ENST00000535927 ZANQ9Y493 2812 aa13.14□□□□□ -0.31
VAMP1-205ENST00000535927 RBFOX2O43251 390 aaKnown RBP eCLIP13.13□□□□□ -0.31
VAMP1-205ENST00000535927 IGLV2-14P01704 120 aa13.13□□□□□ -0.31
VAMP1-205ENST00000535927 DUTP33316 252 aaKnown RBP13.13□□□□□ -0.31
VAMP1-205ENST00000535927 RAB13P51153 203 aa13.13□□□□□ -0.31
VAMP1-205ENST00000535927 MECP2P51608 486 aaKnown RBP13.13□□□□□ -0.31
VAMP1-205ENST00000535927 CBX3Q13185 183 aa13.13□□□□□ -0.31
VAMP1-205ENST00000535927 UTF1Q5T230 341 aa13.13□□□□□ -0.31
VAMP1-205ENST00000535927 DHRS7BQ6IAN0 325 aaPredicted RBP13.13□□□□□ -0.31
VAMP1-205ENST00000535927 FAM53AQ6NSI3 398 aaPredicted RBP13.13□□□□□ -0.31
VAMP1-205ENST00000535927 PLET1Q6UQ28 207 aa13.13□□□□□ -0.31
VAMP1-205ENST00000535927 ZNF818PQ6ZRF7 136 aa13.13□□□□□ -0.31
VAMP1-205ENST00000535927 LDLRAD3Q86YD5 345 aa13.13□□□□□ -0.31
VAMP1-205ENST00000535927 OR5AN1Q8NGI8 311 aa13.13□□□□□ -0.31
VAMP1-205ENST00000535927 SLC2A9Q9NRM0 540 aa13.13□□□□□ -0.31
VAMP1-205ENST00000535927 IGHV1-3A0A0C4DH29 117 aa13.12□□□□□ -0.31
VAMP1-205ENST00000535927 M0R1X1 148 aa13.12□□□□□ -0.31
VAMP1-205ENST00000535927 MPPED1O15442 326 aa13.12□□□□□ -0.31
VAMP1-205ENST00000535927 PROP1O75360 226 aa13.12□□□□□ -0.31
VAMP1-205ENST00000535927 PGLYRP1O75594 196 aaPredicted RBP13.12□□□□□ -0.31
VAMP1-205ENST00000535927 APOA2P02652 100 aa13.12□□□□□ -0.31
VAMP1-205ENST00000535927 CCR6P51684 374 aa13.12□□□□□ -0.31
VAMP1-205ENST00000535927 DLX1P56177 255 aa13.12□□□□□ -0.31
VAMP1-205ENST00000535927 PIGPP57054 158 aa13.12□□□□□ -0.31
VAMP1-205ENST00000535927 EIF4EBP1Q13541 118 aaPredicted RBP13.12□□□□□ -0.31
VAMP1-205ENST00000535927 SSX2Q16385 188 aa13.12□□□□□ -0.31
VAMP1-205ENST00000535927 SGPP2Q8IWX5 399 aa13.12□□□□□ -0.31
VAMP1-205ENST00000535927 PDZD9Q8IXQ8 264 aa13.12□□□□□ -0.31
VAMP1-205ENST00000535927 CENPSQ8N2Z9 138 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms