RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 FAM3DQ96BQ1 224 aa12.6□□□□□ -0.39
CLSTN3-204ENST00000535313 ARHGAP5-AS1Q96IT6 56 aa12.6□□□□□ -0.39
CLSTN3-204ENST00000535313 OR5B12Q96R08 314 aa12.6□□□□□ -0.39
CLSTN3-204ENST00000535313 RNF5Q99942 180 aa12.6□□□□□ -0.39
CLSTN3-204ENST00000535313 AGMATQ9BSE5 352 aa12.6□□□□□ -0.39
CLSTN3-204ENST00000535313 C11orf54Q9H0W9 315 aaPredicted RBP12.6□□□□□ -0.39
CLSTN3-204ENST00000535313 GNB4Q9HAV0 340 aa12.6□□□□□ -0.39
CLSTN3-204ENST00000535313 Q9N2K0 584 aa12.6□□□□□ -0.39
CLSTN3-204ENST00000535313 ACOT13Q9NPJ3 140 aa12.6□□□□□ -0.39
CLSTN3-204ENST00000535313 V9GY05 133 aa12.6□□□□□ -0.39
CLSTN3-204ENST00000535313 A0A1W2PN81 502 aa12.59□□□□□ -0.39
CLSTN3-204ENST00000535313 FOXI3A8MTJ6 420 aaPredicted RBP12.59□□□□□ -0.39
CLSTN3-204ENST00000535313 I3L521 148 aa12.59□□□□□ -0.39
CLSTN3-204ENST00000535313 SCTP09683 121 aa12.59□□□□□ -0.39
CLSTN3-204ENST00000535313 CHRNA7P36544 502 aa12.59□□□□□ -0.39
CLSTN3-204ENST00000535313 TMEM50BP56557 158 aa12.59□□□□□ -0.39
CLSTN3-204ENST00000535313 CX3CL1P78423 397 aa12.59□□□□□ -0.39
CLSTN3-204ENST00000535313 MRPS15P82914 257 aaKnown RBP12.59□□□□□ -0.39
CLSTN3-204ENST00000535313 FABP5Q01469 135 aa12.59□□□□□ -0.39
CLSTN3-204ENST00000535313 TMEM267Q0VDI3 215 aaPredicted RBP12.59□□□□□ -0.39
CLSTN3-204ENST00000535313 C2orf76Q3KRA6 126 aa12.59□□□□□ -0.39
CLSTN3-204ENST00000535313 TCTEX1D1Q8N7M0 179 aa12.59□□□□□ -0.39
CLSTN3-204ENST00000535313 OR5AN1Q8NGI8 311 aa12.59□□□□□ -0.39
CLSTN3-204ENST00000535313 PTX4Q96A99 478 aa12.59□□□□□ -0.39
CLSTN3-204ENST00000535313 PECRQ9BY49 303 aa12.59□□□□□ -0.39
CLSTN3-204ENST00000535313 ZNF221Q9UK13 617 aa12.59□□□□□ -0.39
CLSTN3-204ENST00000535313 FOXA2Q9Y261 457 aaPredicted RBP12.59□□□□□ -0.39
CLSTN3-204ENST00000535313 A3GALT2U3KPV4 340 aa12.59□□□□□ -0.39
CLSTN3-204ENST00000535313 TRDCB7Z8K6 153 aa12.58□□□□□ -0.4
CLSTN3-204ENST00000535313 MAP2K4P45985 399 aa12.58□□□□□ -0.4
CLSTN3-204ENST00000535313 CRIP2P52943 208 aaPredicted RBP12.58□□□□□ -0.4
CLSTN3-204ENST00000535313 GNB1P62873 340 aa12.58□□□□□ -0.4
CLSTN3-204ENST00000535313 NDPQ00604 133 aa12.58□□□□□ -0.4
CLSTN3-204ENST00000535313 DRAXINQ8NBI3 349 aaPredicted RBP12.58□□□□□ -0.4
CLSTN3-204ENST00000535313 PRR25Q96S07 402 aa12.58□□□□□ -0.4
CLSTN3-204ENST00000535313 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.58□□□□□ -0.4
CLSTN3-204ENST00000535313 SCOCQ9UIL1 159 aa12.58□□□□□ -0.4
CLSTN3-204ENST00000535313 RAB22AQ9UL26 194 aa12.58□□□□□ -0.4
CLSTN3-204ENST00000535313 RNF150Q9ULK6 438 aa12.58□□□□□ -0.4
CLSTN3-204ENST00000535313 TENM3Q9P273 2699 aa12.57□□□□□ -0.4
CLSTN3-204ENST00000535313 PDCD5O14737 125 aa12.57□□□□□ -0.4
CLSTN3-204ENST00000535313 INSL3P51460 131 aa12.57□□□□□ -0.4
CLSTN3-204ENST00000535313 PLAC9Q5JTB6 97 aa12.57□□□□□ -0.4
CLSTN3-204ENST00000535313 HES5Q5TA89 166 aa12.57□□□□□ -0.4
CLSTN3-204ENST00000535313 ZNF367Q7RTV3 350 aa12.57□□□□□ -0.4
CLSTN3-204ENST00000535313 CLCC1Q96S66 551 aa12.57□□□□□ -0.4
CLSTN3-204ENST00000535313 TSNAXQ99598 290 aaKnown RBP12.57□□□□□ -0.4
CLSTN3-204ENST00000535313 RDH8Q9NYR8 311 aa12.57□□□□□ -0.4
CLSTN3-204ENST00000535313 METTL1Q9UBP6 276 aaKnown RBP12.57□□□□□ -0.4
CLSTN3-204ENST00000535313 BLOC1S6Q9UL45 172 aa12.57□□□□□ -0.4
CLSTN3-204ENST00000535313 FBXO7Q9Y3I1 522 aa12.57□□□□□ -0.4
CLSTN3-204ENST00000535313 TMEM272A0A1B0GTI8 110 aa12.56□□□□□ -0.4
CLSTN3-204ENST00000535313 FCN1O00602 326 aa12.56□□□□□ -0.4
CLSTN3-204ENST00000535313 LDLRAD4O15165 306 aa12.56□□□□□ -0.4
CLSTN3-204ENST00000535313 APOA2P02652 100 aa12.56□□□□□ -0.4
CLSTN3-204ENST00000535313 TFAP2AP05549 437 aa12.56□□□□□ -0.4
CLSTN3-204ENST00000535313 CD3GP09693 182 aa12.56□□□□□ -0.4
CLSTN3-204ENST00000535313 NHLRC4P0CG21 123 aaPredicted RBP12.56□□□□□ -0.4
CLSTN3-204ENST00000535313 CD40LGP29965 261 aa12.56□□□□□ -0.4
CLSTN3-204ENST00000535313 SERPINB10P48595 397 aa12.56□□□□□ -0.4
CLSTN3-204ENST00000535313 RPS16P62249 146 aaKnown RBP12.56□□□□□ -0.4
CLSTN3-204ENST00000535313 TBCEQ15813 527 aaPredicted RBP12.56□□□□□ -0.4
CLSTN3-204ENST00000535313 ACTBL2Q562R1 376 aa12.56□□□□□ -0.4
CLSTN3-204ENST00000535313 C19orf54Q5BKX5 351 aa12.56□□□□□ -0.4
CLSTN3-204ENST00000535313 ASPHD1Q5U4P2 390 aa12.56□□□□□ -0.4
CLSTN3-204ENST00000535313 PYHIN1Q6K0P9 492 aa12.56□□□□□ -0.4
CLSTN3-204ENST00000535313 CD200R1LQ6Q8B3 271 aa12.56□□□□□ -0.4
CLSTN3-204ENST00000535313 ZNF562Q6V9R5 426 aa12.56□□□□□ -0.4
CLSTN3-204ENST00000535313 PPP1R27Q86WC6 154 aa12.56□□□□□ -0.4
CLSTN3-204ENST00000535313 PDPNQ86YL7 162 aa12.56□□□□□ -0.4
CLSTN3-204ENST00000535313 OR4A4PQ8NGN8 299 aa12.56□□□□□ -0.4
CLSTN3-204ENST00000535313 RAB3CQ96E17 227 aa12.56□□□□□ -0.4
CLSTN3-204ENST00000535313 ZNF256Q9Y2P7 627 aaPredicted RBP12.56□□□□□ -0.4
CLSTN3-204ENST00000535313 NUBP2Q9Y5Y2 271 aa12.56□□□□□ -0.4
CLSTN3-204ENST00000535313 IGKV1-6A0A0C4DH72 117 aa12.55□□□□□ -0.4
CLSTN3-204ENST00000535313 OVOL1O14753 267 aa12.55□□□□□ -0.4
CLSTN3-204ENST00000535313 SOX15O60248 233 aa12.55□□□□□ -0.4
CLSTN3-204ENST00000535313 SPDEFO95238 335 aa12.55□□□□□ -0.4
CLSTN3-204ENST00000535313 GADD45AP24522 165 aa12.55□□□□□ -0.4
CLSTN3-204ENST00000535313 MYL9P24844 172 aa12.55□□□□□ -0.4
CLSTN3-204ENST00000535313 PSG5Q15238 335 aa12.55□□□□□ -0.4
CLSTN3-204ENST00000535313 AKIRIN2Q53H80 203 aa12.55□□□□□ -0.4
CLSTN3-204ENST00000535313 UNQ5815/PRO19632Q6UWF5 114 aa12.55□□□□□ -0.4
CLSTN3-204ENST00000535313 ZNF429Q86V71 674 aa12.55□□□□□ -0.4
CLSTN3-204ENST00000535313 ZNF383Q8NA42 475 aa12.55□□□□□ -0.4
CLSTN3-204ENST00000535313 CASTOR1Q8WTX7 329 aa12.55□□□□□ -0.4
CLSTN3-204ENST00000535313 DCUN1D4Q92564 292 aa12.55□□□□□ -0.4
CLSTN3-204ENST00000535313 FLYWCH2Q96CP2 140 aaKnown RBP12.55□□□□□ -0.4
CLSTN3-204ENST00000535313 WWC2-AS2Q96NR7 200 aa12.55□□□□□ -0.4
CLSTN3-204ENST00000535313 FAM103A1Q9BTL3 118 aaKnown RBP12.55□□□□□ -0.4
CLSTN3-204ENST00000535313 ALX4Q9H161 411 aaPredicted RBP12.55□□□□□ -0.4
CLSTN3-204ENST00000535313 LSM4Q9Y4Z0 139 aaKnown RBP12.55□□□□□ -0.4
CLSTN3-204ENST00000535313 TRAV1-2A0A0B4J238 106 aa12.54□□□□□ -0.4
CLSTN3-204ENST00000535313 LINC01619G3V211 115 aa12.54□□□□□ -0.4
CLSTN3-204ENST00000535313 M0R1X1 148 aa12.54□□□□□ -0.4
CLSTN3-204ENST00000535313 FABP7O15540 132 aa12.54□□□□□ -0.4
CLSTN3-204ENST00000535313 PROP1O75360 226 aa12.54□□□□□ -0.4
CLSTN3-204ENST00000535313 LY86O95711 162 aa12.54□□□□□ -0.4
CLSTN3-204ENST00000535313 CA2P00918 260 aa12.54□□□□□ -0.4
CLSTN3-204ENST00000535313 IGKV1-16P04430 117 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms