RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 TAF9Q16594 264 aa10.24□□□□□ -0.77
SCARB1-204ENST00000535005 TMEM155Q4W5P6 130 aa10.24□□□□□ -0.77
SCARB1-204ENST00000535005 Q6P435 159 aa10.24□□□□□ -0.77
SCARB1-204ENST00000535005 EDARADDQ8WWZ3 215 aa10.24□□□□□ -0.77
SCARB1-204ENST00000535005 PDZD2O15018 2839 aa10.24□□□□□ -0.77
SCARB1-204ENST00000535005 NBPF19A0A087WUL8 3843 aa10.24□□□□□ -0.77
SCARB1-204ENST00000535005 IGKV1D-17A0A075B6S4 117 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 IGHV3OR15-7A0A075B7D8 119 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 A0A0A6YYD4 124 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 SH2D1BO14796 132 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 GEMIN2O14893 280 aaKnown RBP10.23□□□□□ -0.77
SCARB1-204ENST00000535005 DEDDO75618 318 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 AMY2BP19961 511 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 PRDX2P32119 198 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 GPR6P46095 362 aaPredicted RBP10.23□□□□□ -0.77
SCARB1-204ENST00000535005 GUK1Q16774 197 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 ANKRD55Q3KP44 614 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 ZNF788Q6ZQV5 615 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 CD177Q8N6Q3 437 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 DEFB108BQ8NET1 73 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 C10orf105Q8TEF2 133 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 SECTM1Q8WVN6 248 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 SDSLQ96GA7 329 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 GAL3ST1Q99999 423 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 RTBDNQ9BSG5 229 aaPredicted RBP10.23□□□□□ -0.77
SCARB1-204ENST00000535005 SLC35B3Q9H1N7 401 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 A0A1W2PPH5 198 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 VWC2LB2RUY7 222 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 C9JQL5 133 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 TXNL1O43396 289 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 ADAP1O75689 374 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 ZNF205O95201 554 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 HAND1O96004 215 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 IFNA2P01563 188 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 IFNA21P01568 189 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 OR8U9P0C7N5 309 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 RPS2P15880 293 aaKnown RBP10.23□□□□□ -0.77
SCARB1-204ENST00000535005 GNB3P16520 340 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 DUSP1P28562 367 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 CDX1P47902 265 aaPredicted RBP10.23□□□□□ -0.77
SCARB1-204ENST00000535005 SULT1A1P50225 295 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 SLC9A3R2Q15599 337 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 OR2B11Q5JQS5 317 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 GPR157Q5UAW9 335 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 CLEC2AQ6UVW9 174 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 PRSS57Q6UWY2 283 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 OR8U1Q8NH10 309 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 FAM168AQ92567 244 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 OR10C1Q96KK4 312 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 GINS3Q9BRX5 216 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 NICN1Q9BSH3 213 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 SCRT1Q9BWW7 348 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 SPACA1Q9HBV2 294 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 KAAG1Q9UBP8 84 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 FBXL17Q9UF56 701 aa10.23□□□□□ -0.77
SCARB1-204ENST00000535005 C14orf166Q9Y224 244 aaKnown RBP10.23□□□□□ -0.77
SCARB1-204ENST00000535005 A0A087WWC5 75 aa10.22□□□□□ -0.77
SCARB1-204ENST00000535005 E5RGE8 158 aa10.22□□□□□ -0.77
SCARB1-204ENST00000535005 M0R036 132 aa10.22□□□□□ -0.77
SCARB1-204ENST00000535005 DEGS1O15121 323 aa10.22□□□□□ -0.77
SCARB1-204ENST00000535005 SOCS1O15524 211 aa10.22□□□□□ -0.77
SCARB1-204ENST00000535005 KCNAB3O43448 404 aa10.22□□□□□ -0.77
SCARB1-204ENST00000535005 TGOLN2O43493 480 aa10.22□□□□□ -0.77
SCARB1-204ENST00000535005 IFNA10P01566 189 aa10.22□□□□□ -0.77
SCARB1-204ENST00000535005 SNRNP70P08621 437 aaKnown RBP10.22□□□□□ -0.77
SCARB1-204ENST00000535005 FUT3P21217 361 aa10.22□□□□□ -0.77
SCARB1-204ENST00000535005 CHATP28329 748 aa10.22□□□□□ -0.77
SCARB1-204ENST00000535005 S100A2P29034 98 aa10.22□□□□□ -0.77
SCARB1-204ENST00000535005 FCGR2CP31995 323 aa10.22□□□□□ -0.77
SCARB1-204ENST00000535005 NPY4RP50391 375 aa10.22□□□□□ -0.77
SCARB1-204ENST00000535005 SNU13P55769 128 aaKnown RBP10.22□□□□□ -0.77
SCARB1-204ENST00000535005 TMEM50BP56557 158 aa10.22□□□□□ -0.77
SCARB1-204ENST00000535005 S100A10P60903 97 aa10.22□□□□□ -0.77
SCARB1-204ENST00000535005 DEFA6Q01524 100 aa10.22□□□□□ -0.77
SCARB1-204ENST00000535005 CLINT1Q14677 625 aa10.22□□□□□ -0.77
SCARB1-204ENST00000535005 KRBOX4Q5JUW0 171 aa10.22□□□□□ -0.77
SCARB1-204ENST00000535005 YPEL4Q96NS1 127 aa10.22□□□□□ -0.77
SCARB1-204ENST00000535005 GGACTQ9BVM4 153 aa10.22□□□□□ -0.77
SCARB1-204ENST00000535005 ZNF665Q9H7R5 613 aa10.22□□□□□ -0.77
SCARB1-204ENST00000535005 OR14J1Q9UGF5 321 aa10.22□□□□□ -0.77
SCARB1-204ENST00000535005 HSF4Q9ULV5 492 aa10.22□□□□□ -0.77
SCARB1-204ENST00000535005 NSG2Q9Y328 171 aa10.22□□□□□ -0.77
SCARB1-204ENST00000535005 ELOA3CA0A087WX78 387 aaPredicted RBP10.21□□□□□ -0.77
SCARB1-204ENST00000535005 A0A1W2PPE3 182 aa10.21□□□□□ -0.77
SCARB1-204ENST00000535005 BTBD17A6NE02 478 aa10.21□□□□□ -0.77
SCARB1-204ENST00000535005 CXorf65A6NEN9 183 aa10.21□□□□□ -0.77
SCARB1-204ENST00000535005 UMAD1C9J7I0 102 aa10.21□□□□□ -0.77
SCARB1-204ENST00000535005 PDCD6O75340 191 aa10.21□□□□□ -0.77
SCARB1-204ENST00000535005 OR7C1O76099 320 aaPredicted RBP10.21□□□□□ -0.77
SCARB1-204ENST00000535005 OR2H2O95918 312 aa10.21□□□□□ -0.77
SCARB1-204ENST00000535005 GYPAP02724 150 aa10.21□□□□□ -0.77
SCARB1-204ENST00000535005 NQO2P16083 231 aa10.21□□□□□ -0.77
SCARB1-204ENST00000535005 GABRR1P24046 479 aa10.21□□□□□ -0.77
SCARB1-204ENST00000535005 HEPN1Q6WQI6 88 aa10.21□□□□□ -0.77
SCARB1-204ENST00000535005 OR13D1Q8NGV5 346 aa10.21□□□□□ -0.77
SCARB1-204ENST00000535005 GAFA1Q96PS6 74 aa10.21□□□□□ -0.77
SCARB1-204ENST00000535005 PIMREGQ9BSJ6 248 aa10.21□□□□□ -0.77
SCARB1-204ENST00000535005 TRAV24A0A0B4J272 114 aa10.21□□□□□ -0.78
SCARB1-204ENST00000535005 SERPINE3A8MV23 424 aa10.21□□□□□ -0.78
SCARB1-204ENST00000535005 SEC14L6B5MCN3 397 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms