RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 PTPRJQ12913 1337 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 GON4LQ3T8J9 2241 aa2.77□□□□□ -1.97
CSMD3-210ENST00000534172 PTPN13Q12923 2485 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 IGHV3OR16-10A0A075B7F0 116 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 PSMB11A5LHX3 300 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 DHRS7CA6NNS2 312 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 FGF16O43320 207 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 HCRTR1O43613 425 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 HIST1H2BKO60814 126 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 OR2A4O95047 310 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 MT-ND4P03905 459 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 LGALS2P05162 132 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 HIST1H2BJP06899 126 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 CD55P08174 381 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 IL9P15248 144 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 HIST1H2BOP23527 126 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 AGTR1P30556 359 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 HIST1H2BBP33778 126 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 GSK3BP49841 420 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 ZNF140P52738 457 aaPredicted RBP2.76□□□□□ -1.97
CSMD3-210ENST00000534172 HIST1H2BDP58876 126 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 TAS2R43P59537 309 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 S100A10P60903 97 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 HIST1H2BCP62807 126 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 BTG2P78543 158 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 HIST2H2BEQ16778 126 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 LTC4SQ16873 150 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.76□□□□□ -1.97
CSMD3-210ENST00000534172 HENMT1Q5T8I9 393 aaKnown RBP2.76□□□□□ -1.97
CSMD3-210ENST00000534172 FAM78BQ5VT40 261 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 RPL22L1Q6P5R6 122 aaKnown RBP2.76□□□□□ -1.97
CSMD3-210ENST00000534172 WDR82Q6UXN9 313 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 TMEM25Q86YD3 366 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 SMIM20Q8N5G0 67 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 EID2Q8N6I1 236 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 OR5W2Q8NH69 310 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 OR56B4Q8NH76 319 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 ZNF502Q8TBZ5 544 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 HIST1H2BHQ93079 126 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 OR2A7Q96R45 310 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 HIST1H2BNQ99877 126 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 HIST1H2BMQ99879 126 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 PSMG3Q9BT73 122 aaPredicted RBP2.76□□□□□ -1.97
CSMD3-210ENST00000534172 FAIM2Q9BWQ8 316 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 HCAR1Q9BXC0 346 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 RPS10P5Q9NQ39 176 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 UBIAD1Q9Y5Z9 338 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 PLXNB2O15031 1838 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 A0A1B0GTI1 187 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 RPL37AP8A6NKH3 93 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 CLDN34H7C241 214 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 ENSAO43768 121 aaKnown RBP2.76□□□□□ -1.97
CSMD3-210ENST00000534172 CLDN11O75508 207 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 TNFSF13O75888 250 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 CDS2O95674 445 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 RHOCP08134 193 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 CD14P08571 375 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 OR5H8P0DN80 308 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 LAMP1P11279 417 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 AZU1P20160 251 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 RPS10P46783 165 aaKnown RBP2.76□□□□□ -1.97
CSMD3-210ENST00000534172 FBXW4P57775 412 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 GGTLC2Q14390 218 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 ZNF345Q14585 488 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 TMEM183BQ1AE95 376 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 GSG1Q2KHT4 349 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 TMEM128Q5BJH2 165 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 COA6Q5JTJ3 125 aaKnown RBP2.76□□□□□ -1.97
CSMD3-210ENST00000534172 ZNF571Q7Z3V5 609 aaPredicted RBP2.76□□□□□ -1.97
CSMD3-210ENST00000534172 DOLPP1Q86YN1 238 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 ACOT4Q8N9L9 421 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 Q8NBF4 154 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 OR1P1Q8NH06 330 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 GALMQ96C23 342 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 ATOH8Q96SQ7 321 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 LINC00470Q9BZP3 86 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 TXNIPQ9H3M7 391 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 TUBB1Q9H4B7 451 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 LRTM1Q9HBL6 345 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 AMBNQ9NP70 447 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 SLC7A10Q9NS82 523 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 CACFD1Q9UGQ2 172 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 VPREB3Q9UKI3 123 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 TBX21Q9UL17 535 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 SNX10Q9Y5X0 201 aa2.76□□□□□ -1.97
CSMD3-210ENST00000534172 REV3LO60673 3130 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 KANTRA0A1W2PQU2 76 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 TSPAN11A1L157 253 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 C7orf77A4D0Y5 90 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 IFITM5A6NNB3 132 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 ZNF670-ZNF695F2Z2N8 137 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 TNFRSF11BO00300 401 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 DCTN6O00399 190 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 SFTA3P0C7M3 94 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 MPC1LP0DKB6 136 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 PGAM2P15259 253 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 ZNF19P17023 458 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 FUT3P21217 361 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 LMO2P25791 158 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 GDF1P27539 372 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms