RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 IGHV1-45A0A0A0MS14 117 aa6.07□□□□□ -1.44
CTNND1-236ENST00000533667 HLA-DQA1P01909 254 aa6.07□□□□□ -1.44
CTNND1-236ENST00000533667 CD74P04233 296 aa6.07□□□□□ -1.44
CTNND1-236ENST00000533667 FGF5P12034 268 aa6.07□□□□□ -1.44
CTNND1-236ENST00000533667 UCP2P55851 309 aa6.07□□□□□ -1.44
CTNND1-236ENST00000533667 RPL31P62899 125 aaKnown RBP6.07□□□□□ -1.44
CTNND1-236ENST00000533667 LDLRAD3Q86YD5 345 aa6.07□□□□□ -1.44
CTNND1-236ENST00000533667 CYB561D1Q8N8Q1 229 aa6.07□□□□□ -1.44
CTNND1-236ENST00000533667 SFXN3Q9BWM7 321 aa6.07□□□□□ -1.44
CTNND1-236ENST00000533667 CBLN4Q9NTU7 201 aa6.07□□□□□ -1.44
CTNND1-236ENST00000533667 OR5AC2Q9NZP5 309 aa6.07□□□□□ -1.44
CTNND1-236ENST00000533667 PXMP4Q9Y6I8 212 aa6.07□□□□□ -1.44
CTNND1-236ENST00000533667 STRCP1A6NGW2 1772 aa6.07□□□□□ -1.44
CTNND1-236ENST00000533667 MEX3AA1L020 520 aaKnown RBP6.06□□□□□ -1.44
CTNND1-236ENST00000533667 FBLL1A6NHQ2 334 aaKnown RBP6.06□□□□□ -1.44
CTNND1-236ENST00000533667 AHRRA9YTQ3 701 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 KLF7O75840 302 aaPredicted RBP6.06□□□□□ -1.44
CTNND1-236ENST00000533667 CFDP00746 253 aaPredicted RBP6.06□□□□□ -1.44
CTNND1-236ENST00000533667 IGHV3-13P01766 116 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 IGHV3-7P01780 117 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 RCC1P18754 421 aaPredicted RBP6.06□□□□□ -1.44
CTNND1-236ENST00000533667 PPP1CCP36873 323 aaKnown RBP6.06□□□□□ -1.44
CTNND1-236ENST00000533667 NPBWR2P48146 333 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 RPS11P62280 158 aaKnown RBP eCLIP6.06□□□□□ -1.44
CTNND1-236ENST00000533667 IGLV3-21P80748 117 aaPredicted RBP6.06□□□□□ -1.44
CTNND1-236ENST00000533667 PMCHL1Q16048 86 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 LRRC75BQ2VPJ9 315 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 KRTCAP3Q53RY4 240 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 FAM214BQ7L5A3 538 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 LSM10Q969L4 123 aaKnown RBP6.06□□□□□ -1.44
CTNND1-236ENST00000533667 LOXL4Q96JB6 756 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 ZNF714Q96N38 554 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 C19orf24Q9BVV8 132 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 MSL2Q9HCI7 577 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 AGFG2O95081 481 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 HKR1P10072 659 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 PSMB2P49721 201 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 UCNP55089 124 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 SRSF5Q13243 272 aaKnown RBP6.06□□□□□ -1.44
CTNND1-236ENST00000533667 C3AR1Q16581 482 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 PUSL1Q8N0Z8 303 aaKnown RBP6.06□□□□□ -1.44
CTNND1-236ENST00000533667 RFLNBQ8N5W9 214 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 ZNF441Q8N8Z8 693 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 CTHRC1Q96CG8 243 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 PRDM14Q9GZV8 571 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 CHRNA10Q9GZZ6 450 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 IFITM10A6NMD0 228 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 FAM157AC9JC47 383 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 DIRC3C9JPN6 131 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 GREM1O60565 184 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 CLDN14O95500 239 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 ZNF735P0CB33 412 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 IL9P15248 144 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 RPL27AP46776 148 aaKnown RBP6.06□□□□□ -1.44
CTNND1-236ENST00000533667 MNX1P50219 401 aaPredicted RBP6.06□□□□□ -1.44
CTNND1-236ENST00000533667 FHL5Q5TD97 284 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 PMS2CLQ68D20 193 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 LRRC75AQ8NAA5 344 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 OR2I1PQ8NGU4 316 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 ANAPC13Q9BS18 74 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 TMUB1Q9BVT8 246 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 AP5S1Q9NUS5 200 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 CLEC5AQ9NY25 188 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 CISD1Q9NZ45 108 aaKnown RBP6.06□□□□□ -1.44
CTNND1-236ENST00000533667 PAM16Q9Y3D7 125 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 R4GN57 208 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 THSD7AQ9UPZ6 1657 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 DLL1O00548 723 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 UBE2CO00762 179 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 MPV17P39210 176 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 DLX1P56177 255 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 HERPUD1Q15011 391 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 MMD2Q8IY49 270 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 TAF15Q92804 592 aaKnown RBP eCLIP6.06□□□□□ -1.443e-8■■■□□ 14.9
CTNND1-236ENST00000533667 SCARF2Q96GP6 870 aaPredicted RBP6.06□□□□□ -1.44
CTNND1-236ENST00000533667 CHODLQ9H9P2 273 aa6.06□□□□□ -1.44
CTNND1-236ENST00000533667 ZFC3H1O60293 1989 aaKnown RBP6.06□□□□□ -1.44
CTNND1-236ENST00000533667 NINQ8N4C6 2090 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 MIA3Q5JRA6 1907 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 PRR33A8MZF0 331 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 PGLYRP1O75594 196 aaPredicted RBP6.05□□□□□ -1.44
CTNND1-236ENST00000533667 MMDQ15546 238 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 OR1K1Q8NGR3 316 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 FAM222BQ8WU58 562 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 RGP1Q92546 391 aaPredicted RBP6.05□□□□□ -1.44
CTNND1-236ENST00000533667 SOX21Q9Y651 276 aaPredicted RBP6.05□□□□□ -1.44
CTNND1-236ENST00000533667 ARFGEF1Q9Y6D6 1849 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.05□□□□□ -1.44
CTNND1-236ENST00000533667 CEACAM18A8MTB9 384 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 OR2A4O95047 310 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 OR2H2O95918 312 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 NUDT3O95989 172 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 GPX4P36969 197 aaPredicted RBP6.05□□□□□ -1.44
CTNND1-236ENST00000533667 KCNMB1Q16558 191 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 TMEM45BQ96B21 275 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 OR2A7Q96R45 310 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 TIMP4Q99727 224 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 MCM3APO60318 1980 aa6.05□□□□□ -1.44
CTNND1-236ENST00000533667 COL5A3P25940 1745 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms