RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 CABLES2Q9BTV7 478 aa12.15□□□□□ -0.46
CPSF1-210ENST00000532935 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.15□□□□□ -0.46
CPSF1-210ENST00000532935 RDH8Q9NYR8 311 aa12.15□□□□□ -0.46
CPSF1-210ENST00000532935 ELF5Q9UKW6 265 aaPredicted RBP12.15□□□□□ -0.46
CPSF1-210ENST00000532935 A0A1W2PRX2 142 aa12.14□□□□□ -0.47
CPSF1-210ENST00000532935 TCRBV4S1A1TA0A5B7 111 aa12.14□□□□□ -0.47
CPSF1-210ENST00000532935 LINC01548A6NM66 108 aa12.14□□□□□ -0.47
CPSF1-210ENST00000532935 BET1O15155 118 aa12.14□□□□□ -0.47
CPSF1-210ENST00000532935 SCGNO76038 276 aa12.14□□□□□ -0.47
CPSF1-210ENST00000532935 OPN1MWP04001 364 aa12.14□□□□□ -0.47
CPSF1-210ENST00000532935 OPN1MW2P0DN77 364 aa12.14□□□□□ -0.47
CPSF1-210ENST00000532935 OPN1MW3P0DN78 364 aa12.14□□□□□ -0.47
CPSF1-210ENST00000532935 TGFBR1P36897 503 aa12.14□□□□□ -0.47
CPSF1-210ENST00000532935 RPS19P39019 145 aaKnown RBP12.14□□□□□ -0.47
CPSF1-210ENST00000532935 ACTBP60709 375 aa12.14□□□□□ -0.47
CPSF1-210ENST00000532935 MMDQ15546 238 aa12.14□□□□□ -0.47
CPSF1-210ENST00000532935 SRSF7Q16629 238 aaKnown RBP eCLIP12.14□□□□□ -0.47
CPSF1-210ENST00000532935 IGSF11Q5DX21 431 aa12.14□□□□□ -0.47
CPSF1-210ENST00000532935 HACD4Q5VWC8 232 aa12.14□□□□□ -0.47
CPSF1-210ENST00000532935 FOXRED2Q8IWF2 684 aa12.14□□□□□ -0.47
CPSF1-210ENST00000532935 OR5H6Q8NGV6 325 aa12.14□□□□□ -0.47
CPSF1-210ENST00000532935 AP3S1Q92572 193 aa12.14□□□□□ -0.47
CPSF1-210ENST00000532935 R3HDM4Q96D70 268 aa12.14□□□□□ -0.47
CPSF1-210ENST00000532935 TOLLIPQ9H0E2 274 aa12.14□□□□□ -0.47
CPSF1-210ENST00000532935 RHBDL2Q9NX52 303 aa12.14□□□□□ -0.47
CPSF1-210ENST00000532935 LINC00527Q9UJ94 153 aa12.14□□□□□ -0.47
CPSF1-210ENST00000532935 RNF150Q9ULK6 438 aa12.14□□□□□ -0.47
CPSF1-210ENST00000532935 ETV7Q9Y603 341 aa12.14□□□□□ -0.47
CPSF1-210ENST00000532935 KCNAB3O43448 404 aa12.13□□□□□ -0.47
CPSF1-210ENST00000532935 DIRAS3O95661 229 aa12.13□□□□□ -0.47
CPSF1-210ENST00000532935 GSTP1P09211 210 aaKnown RBP12.13□□□□□ -0.47
CPSF1-210ENST00000532935 CT45A6P0DMU7 189 aa12.13□□□□□ -0.47
CPSF1-210ENST00000532935 CT45A5P0DMU8 189 aa12.13□□□□□ -0.47
CPSF1-210ENST00000532935 CT45A7P0DMV0 189 aa12.13□□□□□ -0.47
CPSF1-210ENST00000532935 DTYMKP23919 212 aa12.13□□□□□ -0.47
CPSF1-210ENST00000532935 S100A5P33763 92 aa12.13□□□□□ -0.47
CPSF1-210ENST00000532935 FAM131AQ6UXB0 335 aa12.13□□□□□ -0.47
CPSF1-210ENST00000532935 GLDNQ6ZMI3 551 aaPredicted RBP12.13□□□□□ -0.47
CPSF1-210ENST00000532935 Q6ZS49 121 aa12.13□□□□□ -0.47
CPSF1-210ENST00000532935 ZNF329Q86UD4 541 aa12.13□□□□□ -0.47
CPSF1-210ENST00000532935 STPG2Q8N412 459 aa12.13□□□□□ -0.47
CPSF1-210ENST00000532935 OR4F17Q8NGA8 305 aa12.13□□□□□ -0.47
CPSF1-210ENST00000532935 OR10J5Q8NHC4 309 aa12.13□□□□□ -0.47
CPSF1-210ENST00000532935 PHF21AQ96BD5 680 aa12.13□□□□□ -0.47
CPSF1-210ENST00000532935 RITA1Q96K30 269 aa12.13□□□□□ -0.47
CPSF1-210ENST00000532935 OR4F4Q96R69 305 aa12.13□□□□□ -0.47
CPSF1-210ENST00000532935 WDR12Q9GZL7 423 aaKnown RBP12.13□□□□□ -0.47
CPSF1-210ENST00000532935 PALMDQ9NP74 551 aa12.13□□□□□ -0.47
CPSF1-210ENST00000532935 ZNF221Q9UK13 617 aa12.13□□□□□ -0.47
CPSF1-210ENST00000532935 TSSC4Q9Y5U2 329 aaPredicted RBP12.13□□□□□ -0.47
CPSF1-210ENST00000532935 TRBV6-7A0A0A0MS04 114 aa12.12□□□□□ -0.47
CPSF1-210ENST00000532935 TMEM235A6NFC5 223 aa12.12□□□□□ -0.47
CPSF1-210ENST00000532935 OR5H14A6NHG9 310 aa12.12□□□□□ -0.47
CPSF1-210ENST00000532935 AP4M1O00189 453 aa12.12□□□□□ -0.47
CPSF1-210ENST00000532935 CNTFRP26992 372 aa12.12□□□□□ -0.47
CPSF1-210ENST00000532935 ZNF846Q147U1 533 aa12.12□□□□□ -0.47
CPSF1-210ENST00000532935 ZNF260Q3ZCT1 412 aa12.12□□□□□ -0.47
CPSF1-210ENST00000532935 NUDCD2Q8WVJ2 157 aa12.12□□□□□ -0.47
CPSF1-210ENST00000532935 ACOT12Q8WYK0 555 aa12.12□□□□□ -0.47
CPSF1-210ENST00000532935 KCTD12Q96CX2 325 aaKnown RBP12.12□□□□□ -0.47
CPSF1-210ENST00000532935 SLC25A38Q96DW6 304 aa12.12□□□□□ -0.47
CPSF1-210ENST00000532935 HSPB9Q9BQS6 159 aa12.12□□□□□ -0.47
CPSF1-210ENST00000532935 IGKV1D-8A0A087WSZ0 117 aa12.11□□□□□ -0.47
CPSF1-210ENST00000532935 H0YJW9 148 aa12.11□□□□□ -0.47
CPSF1-210ENST00000532935 NBR2O15453 112 aa12.11□□□□□ -0.47
CPSF1-210ENST00000532935 PROP1O75360 226 aa12.11□□□□□ -0.47
CPSF1-210ENST00000532935 MC5RP33032 325 aa12.11□□□□□ -0.47
CPSF1-210ENST00000532935 ETV6P41212 452 aa12.11□□□□□ -0.47
CPSF1-210ENST00000532935 SLC35B1P78383 322 aa12.11□□□□□ -0.47
CPSF1-210ENST00000532935 PITPNAQ00169 270 aa12.11□□□□□ -0.47
CPSF1-210ENST00000532935 DCTN2Q13561 401 aaKnown RBP12.11□□□□□ -0.47
CPSF1-210ENST00000532935 PNLIPRP3Q17RR3 467 aa12.11□□□□□ -0.47
CPSF1-210ENST00000532935 KHDC1LQ5JSQ8 128 aa12.11□□□□□ -0.47
CPSF1-210ENST00000532935 NPBQ8NG41 125 aa12.11□□□□□ -0.47
CPSF1-210ENST00000532935 OR5AN1Q8NGI8 311 aa12.11□□□□□ -0.47
CPSF1-210ENST00000532935 BORCS5Q969J3 196 aa12.11□□□□□ -0.47
CPSF1-210ENST00000532935 GINS4Q9BRT9 223 aa12.11□□□□□ -0.47
CPSF1-210ENST00000532935 ST6GALNAC5Q9BVH7 336 aa12.11□□□□□ -0.47
CPSF1-210ENST00000532935 SPATA2Q9UM82 520 aa12.11□□□□□ -0.47
CPSF1-210ENST00000532935 H7C2Y5 167 aa12.1□□□□□ -0.47
CPSF1-210ENST00000532935 NDUFA3O95167 84 aa12.1□□□□□ -0.47
CPSF1-210ENST00000532935 OR8U9P0C7N5 309 aa12.1□□□□□ -0.47
CPSF1-210ENST00000532935 GNG2P59768 71 aa12.1□□□□□ -0.47
CPSF1-210ENST00000532935 ZNF45Q02386 682 aa12.1□□□□□ -0.47
CPSF1-210ENST00000532935 MZT2AQ6P582 158 aa12.1□□□□□ -0.47
CPSF1-210ENST00000532935 COMMD1Q8N668 190 aa12.1□□□□□ -0.47
CPSF1-210ENST00000532935 DRAXINQ8NBI3 349 aaPredicted RBP12.1□□□□□ -0.47
CPSF1-210ENST00000532935 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.1□□□□□ -0.47
CPSF1-210ENST00000532935 OR8U1Q8NH10 309 aa12.1□□□□□ -0.47
CPSF1-210ENST00000532935 OR2D2Q9H210 308 aa12.1□□□□□ -0.47
CPSF1-210ENST00000532935 AKIP1Q9NQ31 210 aa12.1□□□□□ -0.47
CPSF1-210ENST00000532935 KIAA1456Q9P272 454 aa12.1□□□□□ -0.47
CPSF1-210ENST00000532935 ZNF107Q9UII5 783 aaPredicted RBP12.1□□□□□ -0.47
CPSF1-210ENST00000532935 WASHC3Q9Y3C0 194 aa12.1□□□□□ -0.47
CPSF1-210ENST00000532935 NOTCH3Q9UM47 2321 aa12.1□□□□□ -0.47
CPSF1-210ENST00000532935 DNAH3Q8TD57 4116 aa12.09□□□□□ -0.47
CPSF1-210ENST00000532935 TRAV18A0A075B6X5 111 aa12.09□□□□□ -0.47
CPSF1-210ENST00000532935 A0A0A6YYH2 397 aa12.09□□□□□ -0.47
CPSF1-210ENST00000532935 A6NJ64 397 aa12.09□□□□□ -0.47
CPSF1-210ENST00000532935 M0R1X1 148 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms