RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 ABHD14BQ96IU4 210 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 MS4A10Q96PG2 267 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 TMEM191AQ9H0A3 160 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 IGHV1-69-2A0A0G2JMI3 117 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 CEACAM18A8MTB9 384 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 RECKO95980 971 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 IGSF11Q5DX21 431 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 AUP1Q9Y679 476 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 GVINP1Q7Z2Y8 2422 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 H0Y980 276 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 TM4SF20Q53R12 229 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 ALX4Q9H161 411 aaPredicted RBP12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 CKAP5Q14008 2032 aa12.72□□□□□ -0.37
PCDHA9-202ENST00000532602 IGKV1D-42A0A075B6H8 117 aa12.71□□□□□ -0.37
PCDHA9-202ENST00000532602 IGLV1-36A0A0B4J1U3 117 aa12.71□□□□□ -0.37
PCDHA9-202ENST00000532602 CSN3P07498 182 aa12.71□□□□□ -0.37
PCDHA9-202ENST00000532602 MMP9P14780 707 aa12.71□□□□□ -0.37
PCDHA9-202ENST00000532602 TMEM255AQ5JRV8 349 aa12.71□□□□□ -0.37
PCDHA9-202ENST00000532602 VWA1Q6PCB0 445 aa12.71□□□□□ -0.37
PCDHA9-202ENST00000532602 DDB2Q92466 427 aa12.71□□□□□ -0.37
PCDHA9-202ENST00000532602 LEAP2Q969E1 77 aa12.71□□□□□ -0.37
PCDHA9-202ENST00000532602 LHFPL6Q9Y693 200 aa12.71□□□□□ -0.37
PCDHA9-202ENST00000532602 DPPA3Q6W0C5 159 aa12.71□□□□□ -0.37
PCDHA9-202ENST00000532602 ZNF253O75346 499 aa12.71□□□□□ -0.37
PCDHA9-202ENST00000532602 SRSF10O75494 262 aaKnown RBP12.71□□□□□ -0.37
PCDHA9-202ENST00000532602 ISG15P05161 165 aa12.71□□□□□ -0.37
PCDHA9-202ENST00000532602 HIST3H3Q16695 136 aa12.71□□□□□ -0.37
PCDHA9-202ENST00000532602 Q6ZT83 130 aa12.71□□□□□ -0.37
PCDHA9-202ENST00000532602 OPN4Q9UHM6 478 aa12.71□□□□□ -0.37
PCDHA9-202ENST00000532602 TRAV30A0A087WSZ9 112 aa12.71□□□□□ -0.38
PCDHA9-202ENST00000532602 ISLRO14498 428 aa12.71□□□□□ -0.38
PCDHA9-202ENST00000532602 PAGE4O60829 102 aa12.71□□□□□ -0.38
PCDHA9-202ENST00000532602 SEC11BP0C7V7 166 aa12.71□□□□□ -0.38
PCDHA9-202ENST00000532602 ZNF645Q8N7E2 425 aa12.71□□□□□ -0.38
PCDHA9-202ENST00000532602 NUP37Q8NFH4 326 aa12.71□□□□□ -0.38
PCDHA9-202ENST00000532602 CTHRC1Q96CG8 243 aa12.71□□□□□ -0.38
PCDHA9-202ENST00000532602 C16orf92Q96LL3 132 aa12.71□□□□□ -0.38
PCDHA9-202ENST00000532602 TMEM204Q9BSN7 226 aa12.71□□□□□ -0.38
PCDHA9-202ENST00000532602 MRPL37Q9BZE1 423 aaKnown RBP12.71□□□□□ -0.38
PCDHA9-202ENST00000532602 CFDP00746 253 aaPredicted RBP12.71□□□□□ -0.38
PCDHA9-202ENST00000532602 GBGT1Q8N5D6 347 aa12.71□□□□□ -0.38
PCDHA9-202ENST00000532602 GSX1Q9H4S2 264 aaPredicted RBP12.71□□□□□ -0.38
PCDHA9-202ENST00000532602 CDRT15L2A8MXV6 281 aa12.7□□□□□ -0.38
PCDHA9-202ENST00000532602 SIAH2O43255 324 aa12.7□□□□□ -0.38
PCDHA9-202ENST00000532602 RAMP1O60894 148 aa12.7□□□□□ -0.38
PCDHA9-202ENST00000532602 TCL1AP56279 114 aa12.7□□□□□ -0.38
PCDHA9-202ENST00000532602 SERF2P84101 59 aa12.7□□□□□ -0.38
PCDHA9-202ENST00000532602 TIMM23BQ5SRD1 257 aa12.7□□□□□ -0.38
PCDHA9-202ENST00000532602 CRIPAKQ8N1N5 446 aa12.7□□□□□ -0.38
PCDHA9-202ENST00000532602 ZNF729A6NN14 1252 aaPredicted RBP12.7□□□□□ -0.38
PCDHA9-202ENST00000532602 GCSHP23434 173 aa12.7□□□□□ -0.38
PCDHA9-202ENST00000532602 PTGDSP41222 190 aa12.7□□□□□ -0.38
PCDHA9-202ENST00000532602 TMEM183BQ1AE95 376 aa12.7□□□□□ -0.38
PCDHA9-202ENST00000532602 ACSF3Q4G176 576 aaPredicted RBP12.7□□□□□ -0.38
PCDHA9-202ENST00000532602 FAM74A7A6NL05 159 aa12.7□□□□□ -0.38
PCDHA9-202ENST00000532602 FAM24BQ8N5W8 94 aa12.7□□□□□ -0.38
PCDHA9-202ENST00000532602 TMEM186Q96B77 213 aa12.7□□□□□ -0.38
PCDHA9-202ENST00000532602 JPT1Q9UK76 154 aa12.7□□□□□ -0.38
PCDHA9-202ENST00000532602 APOBEC3AP31941 199 aaPredicted RBP12.7□□□□□ -0.38
PCDHA9-202ENST00000532602 MFAP4P55083 255 aa12.7□□□□□ -0.38
PCDHA9-202ENST00000532602 HSD17B13Q7Z5P4 300 aaPredicted RBP12.7□□□□□ -0.38
PCDHA9-202ENST00000532602 MRPL30Q8TCC3 161 aaKnown RBP12.7□□□□□ -0.38
PCDHA9-202ENST00000532602 TMEM56-RWDD3S4R434 201 aa12.7□□□□□ -0.38
PCDHA9-202ENST00000532602 ZSWIM8A7E2V4 1837 aa12.7□□□□□ -0.38
PCDHA9-202ENST00000532602 WNT5AP41221 380 aa12.7□□□□□ -0.38
PCDHA9-202ENST00000532602 FAM27E3Q08E93 113 aa12.7□□□□□ -0.38
PCDHA9-202ENST00000532602 CLEC7AQ9BXN2 247 aa12.7□□□□□ -0.38
PCDHA9-202ENST00000532602 COL4A6Q14031 1691 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 hCG_38984A0A1B0GV85 526 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 NPIPB13A6NJU9 1138 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 NPIPB4C9JG80 1138 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 OR2A4O95047 310 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 ARF6P62330 175 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 SYT8Q8NBV8 401 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 APCDD1LQ8NCL9 501 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 OR52M1Q8NGK5 317 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 RAX2Q96IS3 184 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 OR2A7Q96R45 310 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 LINC00470Q9BZP3 86 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 SNRPCP09234 159 aaKnown RBP12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 CSRP1P21291 193 aaKnown RBP12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 DCAF12L2Q5VW00 463 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 SCGB1D4Q6XE38 83 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 RALYQ9UKM9 306 aaKnown RBP12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 IGKV3-11P04433 115 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 SCTP09683 121 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 TFPI2P48307 235 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 ELOBQ15370 118 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 CHCHD2Q9Y6H1 151 aaPredicted RBP12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 TRBV5-5A0A0J9YX44 114 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 M0R2Z0 102 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 OR10J1P30954 320 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 BPIFA4PQ86YQ2 179 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 ABHD12Q8N2K0 398 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 RHBDL1O75783 438 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 DLX1P56177 255 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 LY6EQ16553 131 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 GPHA2Q96T91 129 aa12.69□□□□□ -0.38
PCDHA9-202ENST00000532602 ZNF318Q5VUA4 2279 aa12.68□□□□□ -0.38
PCDHA9-202ENST00000532602 HAX1O00165 279 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms