RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 RPS23P62266 143 aaKnown RBP4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 IL17AQ16552 155 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 FAM201AQ5SY85 155 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 C1QL2Q7Z5L3 287 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 LINC01551Q86U37 167 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 LYG1Q8N1E2 194 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 C11orf42Q8N5U0 333 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 C11orf72Q8NBR9 251 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 OR13C4Q8NGS5 318 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 RNF185Q96GF1 192 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 RNF157Q96PX1 679 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 OR2A7Q96R45 310 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 SCN3BQ9NY72 215 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 SPANXCQ9NY87 97 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 ZNF226Q9NYT6 803 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 RNF7Q9UBF6 113 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 HSPB8Q9UJY1 196 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 DDX60LQ5H9U9 1706 aaKnown RBP4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 DOT1LQ8TEK3 1739 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 LRRK1Q38SD2 2015 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 ARFGEF1Q9Y6D6 1849 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 COL14A1Q05707 1796 aaKnown RBP4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 ZNF850A8MQ14 1090 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 CDRT1O95170 752 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 MPC1LP0DKB6 136 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 ERGP11308 486 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 FGF7P21781 194 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 CDK2P24941 298 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 DEFA5Q01523 94 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 LAMTOR4Q0VGL1 99 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 SIX1Q15475 284 aaPredicted RBP4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 BATFQ16520 125 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 ZNF720Q7Z2F6 126 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 CDC20BQ86Y33 519 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 RAB42Q8N4Z0 105 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 YIPF7Q8N8F6 280 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 BPIFB6Q8NFQ5 453 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 OR4E2Q8NGC2 313 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 OR11H6Q8NGC7 330 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 RXFP4Q8TDU9 374 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 TMEM126AQ9H061 195 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 SLCO1B3Q9NPD5 702 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 ACER3Q9NUN7 267 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 RARRES3Q9UL19 164 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 MYH9P35579 1960 aaKnown RBP4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 IGHV3-38A0A0C4DH36 116 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 A0A1B0GV50 99 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 MYBPHLA2RUH7 354 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 FAM183AA6NL82 134 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 CCL25O15444 150 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 HCRTR1O43613 425 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 NDUFS5O43920 106 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 C1QL1O75973 258 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 ZFAND5O76080 213 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 VDAC1P21796 283 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 PRTN3P24158 256 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 CDK6Q00534 326 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 FKBP3Q00688 224 aaKnown RBP4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 ZNF506Q5JVG8 444 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 FAM3DQ96BQ1 224 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 PHIPQ8WWQ0 1821 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 COL4A3Q01955 1670 aa4.12□□□□□ -1.75
ECHDC1-222ENST00000531967 IGHV3OR16-13A0A075B7E8 117 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 SMIM35A0A1B0GVV1 85 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 TRAPPC13A5PLN9 417 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 OTOL1A6NHN0 477 aaPredicted RBP4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 DHRS3O75911 302 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 CD2P06729 351 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 PRSS1P07477 247 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 UBBP0CG47 229 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 KLK2P20151 261 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 TNFRSF1BP20333 461 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 RPS3P23396 243 aaKnown RBP eCLIP4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 VDAC2P45880 294 aaPredicted RBP4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 DCDP81605 110 aaKnown RBP4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 ICAM4Q14773 271 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 OR8B8Q15620 311 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 CCL14Q16627 93 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 SRSF7Q16629 238 aaKnown RBP eCLIP4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 RUSC1-AS1Q66K80 236 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 KDM4DQ6B0I6 523 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 AGTRAPQ6RW13 159 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 STRADAQ7RTN6 431 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 ZCCHC24Q8N2G6 241 aaKnown RBP4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 SVBPQ8N300 66 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 OR8D4Q8NGM9 314 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 MPLKIPQ8TAP9 179 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 SPACA5Q96QH8 159 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 SLC29A3Q9BZD2 475 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 FBXL12Q9NXK8 326 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 V9GYS6 101 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 NHSQ6T4R5 1651 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 K7EQG2 157 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 AGPAT2O15120 278 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 MMP23AO75900 390 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 APOA2P02652 100 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 FGF6P10767 208 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 CD70P32970 193 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 ZNF763Q0D2J5 394 aa4.11□□□□□ -1.75
ECHDC1-222ENST00000531967 DAZAP2Q15038 168 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms