RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 TUSC2O75896 110 aa8.69□□□□□ -1.02
NEDD8-204ENST00000526430 DIRAS3O95661 229 aa8.69□□□□□ -1.02
NEDD8-204ENST00000526430 CEACAM6P40199 344 aa8.69□□□□□ -1.02
NEDD8-204ENST00000526430 GNG10P50151 68 aa8.69□□□□□ -1.02
NEDD8-204ENST00000526430 ZNF137PP52743 207 aa8.69□□□□□ -1.02
NEDD8-204ENST00000526430 TMEM30BQ3MIR4 351 aa8.69□□□□□ -1.02
NEDD8-204ENST00000526430 ZNF660Q6AZW8 331 aaPredicted RBP8.69□□□□□ -1.02
NEDD8-204ENST00000526430 H1FOOQ8IZA3 346 aaPredicted RBP8.69□□□□□ -1.02
NEDD8-204ENST00000526430 BEST4Q8NFU0 473 aa8.69□□□□□ -1.02
NEDD8-204ENST00000526430 IL1F10Q8WWZ1 152 aa8.69□□□□□ -1.02
NEDD8-204ENST00000526430 MALSU1Q96EH3 234 aa8.69□□□□□ -1.02
NEDD8-204ENST00000526430 CITED2Q99967 270 aaPredicted RBP8.69□□□□□ -1.02
NEDD8-204ENST00000526430 GPR61Q9BZJ8 451 aa8.69□□□□□ -1.02
NEDD8-204ENST00000526430 IFI27L2Q9H2X8 130 aa8.69□□□□□ -1.02
NEDD8-204ENST00000526430 RAB18Q9NP72 206 aa8.69□□□□□ -1.02
NEDD8-204ENST00000526430 MTFP1Q9UDX5 166 aa8.69□□□□□ -1.02
NEDD8-204ENST00000526430 MGAT4AQ9UM21 535 aa8.69□□□□□ -1.02
NEDD8-204ENST00000526430 RBMX2Q9Y388 322 aaKnown RBP8.69□□□□□ -1.02
NEDD8-204ENST00000526430 TBL2Q9Y4P3 447 aaKnown RBP8.69□□□□□ -1.02
NEDD8-204ENST00000526430 SULT1C2O00338 296 aa8.68□□□□□ -1.02
NEDD8-204ENST00000526430 ITGB1BP1O14713 200 aa8.68□□□□□ -1.02
NEDD8-204ENST00000526430 IGLV2-14P01704 120 aa8.68□□□□□ -1.02
NEDD8-204ENST00000526430 LPLP06858 475 aa8.68□□□□□ -1.02
NEDD8-204ENST00000526430 TALDO1P37837 337 aa8.68□□□□□ -1.02
NEDD8-204ENST00000526430 RAB13P51153 203 aa8.68□□□□□ -1.02
NEDD8-204ENST00000526430 PRRX1P54821 245 aa8.68□□□□□ -1.02
NEDD8-204ENST00000526430 KIR2DS1Q14954 304 aa8.68□□□□□ -1.02
NEDD8-204ENST00000526430 MINOS1Q5TGZ0 78 aa8.68□□□□□ -1.02
NEDD8-204ENST00000526430 OVCH2Q7RTZ1 564 aa8.68□□□□□ -1.02
NEDD8-204ENST00000526430 SCPEP1Q9HB40 452 aa8.68□□□□□ -1.02
NEDD8-204ENST00000526430 RDH8Q9NYR8 311 aa8.68□□□□□ -1.02
NEDD8-204ENST00000526430 DPM3Q9P2X0 92 aa8.68□□□□□ -1.02
NEDD8-204ENST00000526430 GNG12Q9UBI6 72 aa8.68□□□□□ -1.02
NEDD8-204ENST00000526430 SLC23A1Q9UHI7 598 aa8.68□□□□□ -1.02
NEDD8-204ENST00000526430 MINOS1-NBL1R4GNA1 71 aa8.68□□□□□ -1.02
NEDD8-204ENST00000526430 STARD9Q9P2P6 4700 aa8.68□□□□□ -1.02
NEDD8-204ENST00000526430 HUWE1Q7Z6Z7 4374 aaKnown RBP8.67□□□□□ -1.02
NEDD8-204ENST00000526430 IGKV1D-13A0A0B4J2D9 117 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 A0A1W2PPI3 338 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 FABP12A6NFH5 140 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 FAM90A9PA6NNJ1 464 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 VGLL3A8MV65 326 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 ST8SIA5O15466 376 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 GSTZ1O43708 216 aaPredicted RBP8.67□□□□□ -1.02
NEDD8-204ENST00000526430 ZNF735P0CB33 412 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 IGKV1-13P0DP09 117 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 LYL1P12980 280 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 ZBTB25P24278 435 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 HTR1DP28221 377 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 CBX5P45973 191 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 OR3A3P47888 321 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 LINC00205P59089 165 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 HABP2Q14520 560 aaPredicted RBP8.67□□□□□ -1.02
NEDD8-204ENST00000526430 SSX2Q16385 188 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 TPTE2P1Q5T6R2 138 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 PYHIN1Q6K0P9 492 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 DHRS11Q6UWP2 260 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 MFSD4AQ8N468 514 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 OR5AP2Q8NGF4 316 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 SMIM4Q8WVI0 70 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 DPF1Q92782 380 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 ABHD14BQ96IU4 210 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 NPFFR1Q9GZQ6 430 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 SERTAD4Q9NUC0 356 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 HILPDAQ9Y5L2 63 aa8.67□□□□□ -1.02
NEDD8-204ENST00000526430 LEUTXA8MZ59 168 aa8.66□□□□□ -1.02
NEDD8-204ENST00000526430 ZNF736B4DX44 427 aaPredicted RBP8.66□□□□□ -1.02
NEDD8-204ENST00000526430 H3BUX3 64 aa8.66□□□□□ -1.02
NEDD8-204ENST00000526430 GABARAPH6UMI1 98 aa8.66□□□□□ -1.02
NEDD8-204ENST00000526430 TOR1AO14656 332 aa8.66□□□□□ -1.02
NEDD8-204ENST00000526430 BET1O15155 118 aa8.66□□□□□ -1.02
NEDD8-204ENST00000526430 NFYAP23511 347 aaPredicted RBP8.66□□□□□ -1.02
NEDD8-204ENST00000526430 RFX2P48378 723 aa8.66□□□□□ -1.02
NEDD8-204ENST00000526430 DYNLT3P51808 116 aa8.66□□□□□ -1.02
NEDD8-204ENST00000526430 MRPS15P82914 257 aaKnown RBP8.66□□□□□ -1.02
NEDD8-204ENST00000526430 ZNF816Q0VGE8 651 aaPredicted RBP8.66□□□□□ -1.02
NEDD8-204ENST00000526430 RNASE12Q5GAN4 147 aaKnown RBP8.66□□□□□ -1.02
NEDD8-204ENST00000526430 LIAT1Q6ZQX7 453 aa8.66□□□□□ -1.02
NEDD8-204ENST00000526430 ZNF833PQ6ZTB9 187 aa8.66□□□□□ -1.02
NEDD8-204ENST00000526430 Q8N2B8 174 aa8.66□□□□□ -1.02
NEDD8-204ENST00000526430 OR4D10Q8NGI6 311 aa8.66□□□□□ -1.02
NEDD8-204ENST00000526430 GIMAP1Q8WWP7 306 aa8.66□□□□□ -1.02
NEDD8-204ENST00000526430 SRRQ9GZT4 340 aa8.66□□□□□ -1.02
NEDD8-204ENST00000526430 RAB9BQ9NP90 201 aa8.66□□□□□ -1.02
NEDD8-204ENST00000526430 AKIP1Q9NQ31 210 aa8.66□□□□□ -1.02
NEDD8-204ENST00000526430 RNF150Q9ULK6 438 aa8.66□□□□□ -1.02
NEDD8-204ENST00000526430 GAB2Q9UQC2 676 aa8.66□□□□□ -1.02
NEDD8-204ENST00000526430 RYR1P21817 5038 aa8.66□□□□□ -1.02
NEDD8-204ENST00000526430 SAA2-SAA4A0A096LPE2 208 aa8.65□□□□□ -1.02
NEDD8-204ENST00000526430 PMP2P02689 132 aa8.65□□□□□ -1.02
NEDD8-204ENST00000526430 CD74P04233 296 aa8.65□□□□□ -1.02
NEDD8-204ENST00000526430 CTXN2P0C2S0 81 aa8.65□□□□□ -1.02
NEDD8-204ENST00000526430 SAA2P0DJI9 122 aaPredicted RBP8.65□□□□□ -1.02
NEDD8-204ENST00000526430 PF4V1P10720 104 aa8.65□□□□□ -1.02
NEDD8-204ENST00000526430 PTBP1P26599 531 aaKnown RBP eCLIP8.65□□□□□ -1.027e-6■□□□□ 9.8
NEDD8-204ENST00000526430 HLA-DMAP28067 261 aa8.65□□□□□ -1.02
NEDD8-204ENST00000526430 HOXD3P31249 432 aaPredicted RBP8.65□□□□□ -1.02
NEDD8-204ENST00000526430 LGALS4P56470 323 aa8.65□□□□□ -1.02
NEDD8-204ENST00000526430 EIF4EBP1Q13541 118 aaPredicted RBP8.65□□□□□ -1.02
NEDD8-204ENST00000526430 DYRK1AQ13627 763 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms