RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 WDR34Q96EX3 536 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 TMA16Q96EY4 203 aaKnown RBP0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 CAPZA3Q96KX2 299 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 FAM19A4Q96LR4 140 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 YPEL4Q96NS1 127 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 OLFM3Q96PB7 478 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 ERMAPQ96PL5 475 aaPredicted RBP0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 PEBP4Q96S96 227 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 SEC22CQ9BRL7 303 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 TMEM70Q9BUB7 260 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 CCDC32Q9BV29 185 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 SMIM3Q9BZL3 60 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 ZNF436Q9C0F3 470 aaPredicted RBP0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 C6orf62Q9GZU0 229 aaPredicted RBP0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 EIF5A2Q9GZV4 153 aaKnown RBP0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 MS4A6AQ9H2W1 248 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 WDR54Q9H977 334 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 BIN3Q9NQY0 253 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 UQCC1Q9NVA1 299 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 C14orf105Q9NVL8 296 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 RMND1Q9NWS8 449 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 DDIT4Q9NX09 232 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 MED29Q9NX70 200 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 TAS2R1Q9NYW7 299 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 MAT2BQ9NZL9 334 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 CKLFQ9UBR5 152 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 TAC3Q9UHF0 121 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 CYB5R1Q9UHQ9 305 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 GNG8Q9UK08 70 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 POLR1DQ9Y2S0 133 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 PPIL1Q9Y3C6 166 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 RBM7Q9Y580 266 aaKnown RBP0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 TRAPPC1Q9Y5R8 145 aa0.76□□□□□ -2.29
ECHDC1-219ENST00000526299 C9orf84Q5VXU9 1444 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 POLR3AO14802 1390 aaPredicted RBP0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 hCG_1818297A0A087WSY0 165 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 TRAV8-3A0A0A6YYJ7 113 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 IGKV1-8A0A0C4DH67 115 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 LOC389332A0A1B0GUA5 103 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 A0A1B0GV50 99 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 A0A1B0GX12 115 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 PQLC2LA1A4F0 135 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 TMEM213A2RRL7 107 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 C5orf49A4QMS7 147 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 MAP1LC3B2A6NCE7 125 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 CCDC160A6NGH7 325 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 GGT3PA6NGU5 568 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 SMIM9A6NGZ8 99 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 RIIAD1A6NNX1 92 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 KNCNA6PVL3 124 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 A8MT66 165 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 C21orf140B9A014 251 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 EEF1E1-BLOC1S5C9J1V9 151 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 C5orf58C9J3I9 102 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 F5H5P2 479 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 TRAPPC2LH3BP13 241 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 CLDN34H7C241 214 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 K7ERS5 55 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 M0QYV0 167 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 M0R2Z0 102 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 AIPO00170 330 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 SLC17A3O00476 420 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 PLPP3O14495 311 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 BHLHE40O14503 412 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 SLC31A1O15431 190 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 GSTZ1O43708 216 aaPredicted RBP0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 HLA-AP01891 365 aaKnown RBP0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 GYPCP04921 128 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 GUSBP08236 651 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 IL3P08700 152 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 SEC11BP0C7V7 166 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 ZNF705DP0CH99 300 aaPredicted RBP0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 SULT1A3P0DMM9 295 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 SULT1A4P0DMN0 295 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 HIST1H1EP10412 219 aaKnown RBP0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 PTHLHP12272 177 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 ZNF35P13682 527 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 M6PRP20645 277 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 PAX6P26367 422 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 S100A4P26447 101 aaKnown RBP0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 CASP1P29466 404 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 PHBP35232 272 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 HSPA9P38646 679 aaKnown RBP0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 CAPZBP47756 277 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 SERPINB10P48595 397 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 RAB13P51153 203 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 STC1P52823 247 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 MP68P56378 58 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 TMEM33P57088 247 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 OR10A3P58181 314 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 CKS1BP61024 79 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 NAA20P61599 178 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 LSM6P62312 80 aaKnown RBP0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 GNG5P63218 68 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 HIST1H3AP68431 136 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 HES1Q14469 280 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 JOSD1Q15040 202 aaPredicted RBP0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 ELOCQ15369 112 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 ZBTB6Q15916 424 aa0.75□□□□□ -2.29
ECHDC1-219ENST00000526299 SSX1Q16384 188 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms