RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 RNF150Q9ULK6 438 aa16.65■□□□□ 0.26
CD44-222ENST00000526025 RBM7Q9Y580 266 aaKnown RBP16.65■□□□□ 0.26
CD44-222ENST00000526025 PPYP01298 95 aa16.64■□□□□ 0.25
CD44-222ENST00000526025 PMP2P02689 132 aa16.64■□□□□ 0.25
CD44-222ENST00000526025 CD74P04233 296 aa16.64■□□□□ 0.25
CD44-222ENST00000526025 CSF1P09603 554 aa16.64■□□□□ 0.25
CD44-222ENST00000526025 TAS2R19P59542 299 aa16.64■□□□□ 0.25
CD44-222ENST00000526025 LSAMPQ13449 338 aa16.64■□□□□ 0.25
CD44-222ENST00000526025 ZNF79Q15937 498 aa16.64■□□□□ 0.25
CD44-222ENST00000526025 RPL39P5Q59GN2 51 aa16.64■□□□□ 0.25
CD44-222ENST00000526025 ZNF645Q8N7E2 425 aa16.64■□□□□ 0.25
CD44-222ENST00000526025 TMEM158Q8WZ71 300 aa16.64■□□□□ 0.25
CD44-222ENST00000526025 MRPL20Q9BYC9 149 aaKnown RBP16.64■□□□□ 0.25
CD44-222ENST00000526025 PTTG2Q9NZH5 202 aa16.64■□□□□ 0.25
CD44-222ENST00000526025 OR5H14A6NHG9 310 aa16.63■□□□□ 0.25
CD44-222ENST00000526025 PROP1O75360 226 aa16.63■□□□□ 0.25
CD44-222ENST00000526025 SNRNP70P08621 437 aaKnown RBP16.63■□□□□ 0.25
CD44-222ENST00000526025 AADACP22760 399 aa16.63■□□□□ 0.25
CD44-222ENST00000526025 RFX2P48378 723 aa16.63■□□□□ 0.25
CD44-222ENST00000526025 LY6EQ16553 131 aa16.63■□□□□ 0.25
CD44-222ENST00000526025 RNASE12Q5GAN4 147 aaKnown RBP16.63■□□□□ 0.25
CD44-222ENST00000526025 CCBE1Q6UXH8 406 aaPredicted RBP16.63■□□□□ 0.25
CD44-222ENST00000526025 CAPSLQ8WWF8 208 aa16.63■□□□□ 0.25
CD44-222ENST00000526025 AKR1E2Q96JD6 320 aa16.63■□□□□ 0.25
CD44-222ENST00000526025 TNFRSF19Q9NS68 423 aa16.63■□□□□ 0.25
CD44-222ENST00000526025 SDHAF2Q9NX18 166 aa16.63■□□□□ 0.25
CD44-222ENST00000526025 IGKV1D-13A0A0B4J2D9 117 aa16.62■□□□□ 0.25
CD44-222ENST00000526025 FAM181BA6NEQ2 426 aa16.62■□□□□ 0.25
CD44-222ENST00000526025 OR2F2O95006 317 aa16.62■□□□□ 0.25
CD44-222ENST00000526025 CT45A6P0DMU7 189 aa16.62■□□□□ 0.25
CD44-222ENST00000526025 CT45A5P0DMU8 189 aa16.62■□□□□ 0.25
CD44-222ENST00000526025 CT45A7P0DMV0 189 aa16.62■□□□□ 0.25
CD44-222ENST00000526025 IGKV1-13P0DP09 117 aa16.62■□□□□ 0.25
CD44-222ENST00000526025 MC5RP33032 325 aa16.62■□□□□ 0.25
CD44-222ENST00000526025 SRSF2Q01130 221 aaKnown RBP16.62■□□□□ 0.25
CD44-222ENST00000526025 TAGLNQ01995 201 aaKnown RBP16.62■□□□□ 0.25
CD44-222ENST00000526025 KRTAP24-1Q3LI83 254 aa16.62■□□□□ 0.25
CD44-222ENST00000526025 RNASE10Q5GAN6 216 aaKnown RBP16.62■□□□□ 0.25
CD44-222ENST00000526025 ARRDC1Q8N5I2 433 aa16.62■□□□□ 0.25
CD44-222ENST00000526025 OR5AN1Q8NGI8 311 aa16.62■□□□□ 0.25
CD44-222ENST00000526025 OR6F1Q8NGZ6 308 aa16.62■□□□□ 0.25
CD44-222ENST00000526025 OR2T10Q8NGZ9 312 aa16.62■□□□□ 0.25
CD44-222ENST00000526025 BORCS5Q969J3 196 aa16.62■□□□□ 0.25
CD44-222ENST00000526025 MOB3AQ96BX8 217 aa16.62■□□□□ 0.25
CD44-222ENST00000526025 ADTRPQ96IZ2 230 aa16.62■□□□□ 0.25
CD44-222ENST00000526025 RBM14Q96PK6 669 aaKnown RBP16.62■□□□□ 0.25
CD44-222ENST00000526025 RANBP3Q9H6Z4 567 aaPredicted RBP16.62■□□□□ 0.25
CD44-222ENST00000526025 CHST1O43916 411 aa16.61■□□□□ 0.25
CD44-222ENST00000526025 NDUFA7O95182 113 aa16.61■□□□□ 0.25
CD44-222ENST00000526025 MOSP00540 346 aa16.61■□□□□ 0.25
CD44-222ENST00000526025 IGKV1D-33P01593 117 aa16.61■□□□□ 0.25
CD44-222ENST00000526025 IGKV1-33P01594 117 aa16.61■□□□□ 0.25
CD44-222ENST00000526025 CD3DP04234 171 aa16.61■□□□□ 0.25
CD44-222ENST00000526025 CRYBA1P05813 215 aa16.61■□□□□ 0.25
CD44-222ENST00000526025 HERV-K104P61576 105 aa16.61■□□□□ 0.25
CD44-222ENST00000526025 ZNF45Q02386 682 aa16.61■□□□□ 0.25
CD44-222ENST00000526025 MEF2DQ14814 521 aa16.61■□□□□ 0.25
CD44-222ENST00000526025 PYDC2Q56P42 97 aa16.61■□□□□ 0.25
CD44-222ENST00000526025 DHRS7BQ6IAN0 325 aaPredicted RBP16.61■□□□□ 0.25
CD44-222ENST00000526025 Q8N402 240 aa16.61■□□□□ 0.25
CD44-222ENST00000526025 Q8N6K4 173 aa16.61■□□□□ 0.25
CD44-222ENST00000526025 GDPD1Q8N9F7 314 aa16.61■□□□□ 0.25
CD44-222ENST00000526025 ZBTB34Q8NCN2 500 aa16.61■□□□□ 0.25
CD44-222ENST00000526025 OR8H1Q8NGG4 311 aa16.61■□□□□ 0.25
CD44-222ENST00000526025 DEDD2Q8WXF8 326 aa16.61■□□□□ 0.25
CD44-222ENST00000526025 ZNF2Q9BSG1 426 aaPredicted RBP16.61■□□□□ 0.25
CD44-222ENST00000526025 COL6A5A8TX70 2615 aa16.6■□□□□ 0.25
CD44-222ENST00000526025 ANKRD20A5PA0PJZ0 165 aa16.6■□□□□ 0.25
CD44-222ENST00000526025 H0YJW9 148 aa16.6■□□□□ 0.25
CD44-222ENST00000526025 M0QZK8 103 aa16.6■□□□□ 0.25
CD44-222ENST00000526025 M0R1X1 148 aa16.6■□□□□ 0.25
CD44-222ENST00000526025 IGLV2-14P01704 120 aa16.6■□□□□ 0.25
CD44-222ENST00000526025 HKR1P10072 659 aa16.6■□□□□ 0.25
CD44-222ENST00000526025 CD24P25063 80 aa16.6■□□□□ 0.25
CD44-222ENST00000526025 STEAP1BQ6NZ63 245 aa16.6■□□□□ 0.25
CD44-222ENST00000526025 TMEM17Q86X19 198 aa16.6■□□□□ 0.25
CD44-222ENST00000526025 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.6■□□□□ 0.25
CD44-222ENST00000526025 TRIM63Q969Q1 353 aa16.6■□□□□ 0.25
CD44-222ENST00000526025 C5orf30Q96GV9 206 aa16.6■□□□□ 0.25
CD44-222ENST00000526025 EAF1Q96JC9 268 aaPredicted RBP16.6■□□□□ 0.25
CD44-222ENST00000526025 THAP7Q9BT49 309 aaPredicted RBP16.6■□□□□ 0.25
CD44-222ENST00000526025 SRRQ9GZT4 340 aa16.6■□□□□ 0.25
CD44-222ENST00000526025 IGHV3-72A0A0B4J1Y9 119 aa16.59■□□□□ 0.25
CD44-222ENST00000526025 IFNA6P05013 189 aa16.59■□□□□ 0.25
CD44-222ENST00000526025 TMEM11P17152 192 aa16.59■□□□□ 0.25
CD44-222ENST00000526025 THBS3P49746 956 aa16.59■□□□□ 0.25
CD44-222ENST00000526025 TSPAN5P62079 268 aa16.59■□□□□ 0.25
CD44-222ENST00000526025 HES1Q14469 280 aa16.59■□□□□ 0.25
CD44-222ENST00000526025 TMEM219Q86XT9 240 aa16.59■□□□□ 0.25
CD44-222ENST00000526025 SLC25A33Q9BSK2 321 aa16.59■□□□□ 0.25
CD44-222ENST00000526025 NPFFR1Q9GZQ6 430 aa16.59■□□□□ 0.25
CD44-222ENST00000526025 WASHC3Q9Y3C0 194 aa16.59■□□□□ 0.25
CD44-222ENST00000526025 M0QYG6 137 aa16.58■□□□□ 0.24
CD44-222ENST00000526025 FGF16O43320 207 aa16.58■□□□□ 0.24
CD44-222ENST00000526025 TSPAN9O75954 239 aa16.58■□□□□ 0.24
CD44-222ENST00000526025 RAB3DO95716 219 aa16.58■□□□□ 0.24
CD44-222ENST00000526025 APOA2P02652 100 aa16.58■□□□□ 0.24
CD44-222ENST00000526025 AKAIN1P0CW23 69 aa16.58■□□□□ 0.24
CD44-222ENST00000526025 DUTP33316 252 aaKnown RBP16.58■□□□□ 0.24
CD44-222ENST00000526025 UCP3P55916 312 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms