RNA–Protein interactions for RNA: ENST00000525074.5

TRIM3-203, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRIM3, Length 3,044 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-203ENST00000525074 CADM4Q8NFZ8 388 aa11.13□□□□□ -0.63
TRIM3-203ENST00000525074 SGMS2Q8NHU3 365 aa11.13□□□□□ -0.63
TRIM3-203ENST00000525074 FAM103A1Q9BTL3 118 aaKnown RBP11.13□□□□□ -0.63
TRIM3-203ENST00000525074 CEP192Q8TEP8 1941 aa11.13□□□□□ -0.63
TRIM3-203ENST00000525074 TRAV38-1A0A0B4J264 116 aa11.13□□□□□ -0.63
TRIM3-203ENST00000525074 CBLN1P23435 193 aa11.13□□□□□ -0.63
TRIM3-203ENST00000525074 HOXA6P31267 233 aa11.13□□□□□ -0.63
TRIM3-203ENST00000525074 LINC00205P59089 165 aa11.13□□□□□ -0.63
TRIM3-203ENST00000525074 ZNF808Q8N4W9 903 aaPredicted RBP11.13□□□□□ -0.63
TRIM3-203ENST00000525074 ZDHHC16Q969W1 377 aa11.13□□□□□ -0.63
TRIM3-203ENST00000525074 LY6G6EA0A0G2JKS1 128 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 DUXBA0A1W2PPF3 345 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 F2Z2F3 143 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 RAMP3O60896 148 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 VAMP5O95183 116 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 FRMD6-AS1P0C7T7 363 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 LIFP15018 202 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 ADMP35318 185 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 G6PCP35575 357 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 FOXG1P55316 489 aaPredicted RBP11.12□□□□□ -0.63
TRIM3-203ENST00000525074 FGF12P61328 243 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 ZNF585BQ52M93 769 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 KCNIP4Q6PIL6 250 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 MKXQ8IYA7 352 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 PINX1Q96BK5 328 aaKnown RBP11.12□□□□□ -0.63
TRIM3-203ENST00000525074 U3KQA8 63 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 GTF3C1Q12789 2109 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 TMEM210A6NLX4 147 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 SPINK4O60575 86 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 GGCTO75223 188 aaKnown RBP11.12□□□□□ -0.63
TRIM3-203ENST00000525074 OR10J1P30954 320 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 OTX2P32243 289 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 CARD18P57730 90 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 PPP1CBP62140 327 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 HOXA4Q00056 320 aaPredicted RBP11.12□□□□□ -0.63
TRIM3-203ENST00000525074 RABEPKQ7Z6M1 372 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 MCEMP1Q8IX19 187 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 OR1L1Q8NH94 360 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 CMTM2Q8TAZ6 248 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 HIPK2Q9H2X6 1198 aa11.12□□□□□ -0.63
TRIM3-203ENST00000525074 UBE2ZQ9H832 354 aaPredicted RBP11.12□□□□□ -0.63
TRIM3-203ENST00000525074 SIRPB1O00241 398 aa11.11□□□□□ -0.63
TRIM3-203ENST00000525074 RHBDL1O75783 438 aa11.11□□□□□ -0.63
TRIM3-203ENST00000525074 TRA2AQ13595 282 aaKnown RBP eCLIP11.11□□□□□ -0.63
TRIM3-203ENST00000525074 WIPI1Q5MNZ9 446 aaPredicted RBP11.11□□□□□ -0.63
TRIM3-203ENST00000525074 Q6ZWC4 215 aa11.11□□□□□ -0.63
TRIM3-203ENST00000525074 MRPL21Q7Z2W9 205 aaKnown RBP11.11□□□□□ -0.63
TRIM3-203ENST00000525074 CISD2Q8N5K1 135 aaKnown RBP11.11□□□□□ -0.63
TRIM3-203ENST00000525074 NEIL1Q96FI4 390 aaPredicted RBP11.11□□□□□ -0.63
TRIM3-203ENST00000525074 HSPB9Q9BQS6 159 aa11.11□□□□□ -0.63
TRIM3-203ENST00000525074 ZDHHC11Q9H8X9 412 aa11.11□□□□□ -0.63
TRIM3-203ENST00000525074 CNOT1A5YKK6 2376 aaKnown RBP11.11□□□□□ -0.63
TRIM3-203ENST00000525074 BDP1A6H8Y1 2624 aa11.11□□□□□ -0.63
TRIM3-203ENST00000525074 IGLV3-12A0A075B6K2 115 aa11.11□□□□□ -0.63
TRIM3-203ENST00000525074 KIR2DL5BA0A0G2JN68 375 aa11.11□□□□□ -0.63
TRIM3-203ENST00000525074 KIR2DL5BA0A0G2JPC4 375 aa11.11□□□□□ -0.63
TRIM3-203ENST00000525074 TCF21O43680 179 aa11.11□□□□□ -0.63
TRIM3-203ENST00000525074 IGLV2-14P01704 120 aa11.11□□□□□ -0.63
TRIM3-203ENST00000525074 UMODP07911 640 aa11.11□□□□□ -0.63
TRIM3-203ENST00000525074 DCAF10Q5QP82 559 aa11.11□□□□□ -0.63
TRIM3-203ENST00000525074 KIR2DL5AQ8N109 375 aa11.11□□□□□ -0.63
TRIM3-203ENST00000525074 FGFRL1Q8N441 504 aa11.11□□□□□ -0.63
TRIM3-203ENST00000525074 MAFAQ8NHW3 353 aaPredicted RBP11.11□□□□□ -0.63
TRIM3-203ENST00000525074 AGMATQ9BSE5 352 aa11.11□□□□□ -0.63
TRIM3-203ENST00000525074 PROK2Q9HC23 129 aa11.11□□□□□ -0.63
TRIM3-203ENST00000525074 TRAV24A0A0B4J272 114 aa11.11□□□□□ -0.63
TRIM3-203ENST00000525074 RBFOX2O43251 390 aaKnown RBP eCLIP11.11□□□□□ -0.63
TRIM3-203ENST00000525074 CXCL12P48061 93 aa11.11□□□□□ -0.63
TRIM3-203ENST00000525074 CLDN15P56746 228 aa11.11□□□□□ -0.63
TRIM3-203ENST00000525074 PCOLCEQ15113 449 aa11.11□□□□□ -0.63
TRIM3-203ENST00000525074 LINC01551Q86U37 167 aa11.11□□□□□ -0.63
TRIM3-203ENST00000525074 ZCCHC14Q8WYQ9 949 aaKnown RBP11.11□□□□□ -0.63
TRIM3-203ENST00000525074 OPN3Q9H1Y3 402 aaPredicted RBP11.11□□□□□ -0.63
TRIM3-203ENST00000525074 LPAR2Q9HBW0 351 aa11.11□□□□□ -0.63
TRIM3-203ENST00000525074 TMEM9BQ9NQ34 198 aa11.11□□□□□ -0.63
TRIM3-203ENST00000525074 CTXND1A0A1B0GTU2 59 aa11.1□□□□□ -0.63
TRIM3-203ENST00000525074 TMEM250H0YL14 139 aa11.1□□□□□ -0.63
TRIM3-203ENST00000525074 ZG16O60844 167 aa11.1□□□□□ -0.63
TRIM3-203ENST00000525074 GNB1P62873 340 aa11.1□□□□□ -0.63
TRIM3-203ENST00000525074 RELQ04864 619 aaPredicted RBP11.1□□□□□ -0.63
TRIM3-203ENST00000525074 SPATA46Q5T0L3 261 aa11.1□□□□□ -0.63
TRIM3-203ENST00000525074 ANAPC16Q96DE5 110 aa11.1□□□□□ -0.63
TRIM3-203ENST00000525074 PRDM6Q9NQX0 595 aa11.1□□□□□ -0.63
TRIM3-203ENST00000525074 SLC17A3O00476 420 aa11.1□□□□□ -0.63
TRIM3-203ENST00000525074 DKK1O94907 266 aa11.1□□□□□ -0.63
TRIM3-203ENST00000525074 DSCR4P56555 118 aaPredicted RBP11.1□□□□□ -0.63
TRIM3-203ENST00000525074 EDDM3BP56851 147 aa11.1□□□□□ -0.63
TRIM3-203ENST00000525074 R3HDM4Q96D70 268 aa11.1□□□□□ -0.63
TRIM3-203ENST00000525074 TRAV34A0A0B4J273 112 aa11.09□□□□□ -0.63
TRIM3-203ENST00000525074 RPL15P61313 204 aaKnown RBP11.09□□□□□ -0.63
TRIM3-203ENST00000525074 Q6ZVH6 145 aa11.09□□□□□ -0.63
TRIM3-203ENST00000525074 PRRG4Q9BZD6 226 aa11.09□□□□□ -0.63
TRIM3-203ENST00000525074 RYDENQ9NUL5 291 aaKnown RBP11.09□□□□□ -0.63
TRIM3-203ENST00000525074 TRAPPC2LQ9UL33 140 aa11.09□□□□□ -0.63
TRIM3-203ENST00000525074 MED13Q9UHV7 2174 aa11.09□□□□□ -0.63
TRIM3-203ENST00000525074 SERF1AO75920 110 aa11.09□□□□□ -0.63
TRIM3-203ENST00000525074 TDHQ8IZJ6 230 aa11.09□□□□□ -0.63
TRIM3-203ENST00000525074 IFI44Q8TCB0 444 aa11.09□□□□□ -0.63
TRIM3-203ENST00000525074 DTD1Q8TEA8 209 aa11.09□□□□□ -0.63
TRIM3-203ENST00000525074 WDYHV1Q96HA8 205 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms