RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 IL17DQ8TAD2 202 aa17.29■□□□□ 0.36
PVT1-218ENST00000523328 HIPK2Q9H2X6 1198 aa17.29■□□□□ 0.36
PVT1-218ENST00000523328 ZNF355PQ9NSJ1 428 aa17.29■□□□□ 0.36
PVT1-218ENST00000523328 DIMT1Q9UNQ2 313 aaKnown RBP17.29■□□□□ 0.36
PVT1-218ENST00000523328 SLC22A1O15245 554 aa17.28■□□□□ 0.36
PVT1-218ENST00000523328 PROP1O75360 226 aa17.28■□□□□ 0.36
PVT1-218ENST00000523328 SYNJ2BPP57105 145 aa17.28■□□□□ 0.36
PVT1-218ENST00000523328 SSBP2P81877 361 aaPredicted RBP17.28■□□□□ 0.36
PVT1-218ENST00000523328 FXYD3Q14802 87 aa17.28■□□□□ 0.36
PVT1-218ENST00000523328 MOGAT2Q3SYC2 334 aa17.28■□□□□ 0.36
PVT1-218ENST00000523328 ZNF880Q6PDB4 577 aa17.28■□□□□ 0.36
PVT1-218ENST00000523328 GRPEL2Q8TAA5 225 aa17.28■□□□□ 0.36
PVT1-218ENST00000523328 DERL3Q96Q80 235 aa17.28■□□□□ 0.36
PVT1-218ENST00000523328 FAAP24Q9BTP7 215 aa17.28■□□□□ 0.36
PVT1-218ENST00000523328 ADAM30Q9UKF2 790 aa17.28■□□□□ 0.36
PVT1-218ENST00000523328 EXOSC1Q9Y3B2 195 aaKnown RBP17.28■□□□□ 0.36
PVT1-218ENST00000523328 A0A0G2JLM5 398 aa17.27■□□□□ 0.36
PVT1-218ENST00000523328 IZUMO1RA6ND01 250 aa17.27■□□□□ 0.36
PVT1-218ENST00000523328 ITGB1BP1O14713 200 aa17.27■□□□□ 0.36
PVT1-218ENST00000523328 SPDEFO95238 335 aa17.27■□□□□ 0.36
PVT1-218ENST00000523328 NAPSAO96009 420 aa17.27■□□□□ 0.36
PVT1-218ENST00000523328 IGKV1-16P04430 117 aa17.27■□□□□ 0.36
PVT1-218ENST00000523328 CSN3P07498 182 aa17.27■□□□□ 0.36
PVT1-218ENST00000523328 LCN12Q6JVE5 192 aa17.27■□□□□ 0.36
PVT1-218ENST00000523328 C6orf201Q7Z4U5 140 aa17.27■□□□□ 0.36
PVT1-218ENST00000523328 NKAIN3Q8N8D7 197 aa17.27■□□□□ 0.36
PVT1-218ENST00000523328 OR5T1Q8NG75 326 aa17.27■□□□□ 0.36
PVT1-218ENST00000523328 NEDD4LQ96PU5 975 aa17.27■□□□□ 0.36
PVT1-218ENST00000523328 FAM110AQ9BQ89 295 aa17.27■□□□□ 0.36
PVT1-218ENST00000523328 UQCC2Q9BRT2 126 aa17.27■□□□□ 0.36
PVT1-218ENST00000523328 C9orf16Q9BUW7 83 aa17.27■□□□□ 0.36
PVT1-218ENST00000523328 SIGLEC8Q9NYZ4 499 aa17.27■□□□□ 0.36
PVT1-218ENST00000523328 GHRLQ9UBU3 117 aa17.27■□□□□ 0.36
PVT1-218ENST00000523328 MYL12AP19105 171 aa17.26■□□□□ 0.35
PVT1-218ENST00000523328 ZFP1Q6P2D0 407 aa17.26■□□□□ 0.35
PVT1-218ENST00000523328 Q8N402 240 aa17.26■□□□□ 0.35
PVT1-218ENST00000523328 DRAXINQ8NBI3 349 aaPredicted RBP17.26■□□□□ 0.35
PVT1-218ENST00000523328 TSNAXQ99598 290 aaKnown RBP17.26■□□□□ 0.35
PVT1-218ENST00000523328 CEPT1Q9Y6K0 416 aa17.26■□□□□ 0.35
PVT1-218ENST00000523328 CPEP16870 476 aa17.25■□□□□ 0.35
PVT1-218ENST00000523328 LINC00205P59089 165 aa17.25■□□□□ 0.35
PVT1-218ENST00000523328 OR10K2Q6IF99 312 aa17.25■□□□□ 0.35
PVT1-218ENST00000523328 ZNF383Q8NA42 475 aa17.25■□□□□ 0.35
PVT1-218ENST00000523328 C11orf54Q9H0W9 315 aaPredicted RBP17.25■□□□□ 0.35
PVT1-218ENST00000523328 PNMA8CA0A1B0GUJ8 204 aa17.24■□□□□ 0.35
PVT1-218ENST00000523328 SHISA3A0PJX4 238 aa17.24■□□□□ 0.35
PVT1-218ENST00000523328 IRGMA1A4Y4 181 aa17.24■□□□□ 0.35
PVT1-218ENST00000523328 SLC25A17O43808 307 aa17.24■□□□□ 0.35
PVT1-218ENST00000523328 TRBV12-3P01733 135 aa17.24■□□□□ 0.35
PVT1-218ENST00000523328 MECP2P51608 486 aaKnown RBP17.24■□□□□ 0.35
PVT1-218ENST00000523328 RPS16P62249 146 aaKnown RBP17.24■□□□□ 0.35
PVT1-218ENST00000523328 DEFA5Q01523 94 aa17.24■□□□□ 0.35
PVT1-218ENST00000523328 ZNF343Q6P1L6 599 aa17.24■□□□□ 0.35
PVT1-218ENST00000523328 OR1A1Q9P1Q5 309 aa17.24■□□□□ 0.35
PVT1-218ENST00000523328 PEF1Q9UBV8 284 aaKnown RBP17.24■□□□□ 0.35
PVT1-218ENST00000523328 BRI3O95415 125 aa17.23■□□□□ 0.35
PVT1-218ENST00000523328 HTR2CP28335 458 aa17.23■□□□□ 0.35
PVT1-218ENST00000523328 RPS27AP62979 156 aaKnown RBP17.23■□□□□ 0.35
PVT1-218ENST00000523328 TINAGL1Q9GZM7 467 aaPredicted RBP17.23■□□□□ 0.35
PVT1-218ENST00000523328 PLEKHA3Q9HB20 300 aa17.23■□□□□ 0.35
PVT1-218ENST00000523328 DYNC1I1O14576 645 aa17.22■□□□□ 0.35
PVT1-218ENST00000523328 CEACAM6P40199 344 aa17.22■□□□□ 0.35
PVT1-218ENST00000523328 PJVKQ0ZLH3 352 aa17.22■□□□□ 0.35
PVT1-218ENST00000523328 MOB1BQ7L9L4 216 aa17.22■□□□□ 0.35
PVT1-218ENST00000523328 PDPNQ86YL7 162 aa17.22■□□□□ 0.35
PVT1-218ENST00000523328 SETD6Q8TBK2 473 aa17.22■□□□□ 0.35
PVT1-218ENST00000523328 EDARADDQ8WWZ3 215 aa17.22■□□□□ 0.35
PVT1-218ENST00000523328 TMEM80Q96HE8 168 aa17.22■□□□□ 0.35
PVT1-218ENST00000523328 NICN1Q9BSH3 213 aa17.22■□□□□ 0.35
PVT1-218ENST00000523328 CHMP1AQ9HD42 196 aaPredicted RBP17.22■□□□□ 0.35
PVT1-218ENST00000523328 IGLV2-23P01705 113 aa17.21■□□□□ 0.35
PVT1-218ENST00000523328 UBBP0CG47 229 aa17.21■□□□□ 0.35
PVT1-218ENST00000523328 AADACP22760 399 aa17.21■□□□□ 0.35
PVT1-218ENST00000523328 TAS2R43P59537 309 aa17.21■□□□□ 0.35
PVT1-218ENST00000523328 DYRK1AQ13627 763 aa17.21■□□□□ 0.35
PVT1-218ENST00000523328 PTX4Q96A99 478 aa17.21■□□□□ 0.35
PVT1-218ENST00000523328 TM2D1Q9BX74 207 aa17.21■□□□□ 0.35
PVT1-218ENST00000523328 TMEM59Q9BXS4 323 aa17.21■□□□□ 0.35
PVT1-218ENST00000523328 TRBV6-6A0A0A6YYG2 114 aa17.2■□□□□ 0.34
PVT1-218ENST00000523328 RBMXL2O75526 392 aaKnown RBP17.2■□□□□ 0.34
PVT1-218ENST00000523328 OR2A4O95047 310 aa17.2■□□□□ 0.34
PVT1-218ENST00000523328 CNIH1O95406 144 aa17.2■□□□□ 0.34
PVT1-218ENST00000523328 CRYGBP07316 175 aa17.2■□□□□ 0.34
PVT1-218ENST00000523328 ZBTB25P24278 435 aa17.2■□□□□ 0.34
PVT1-218ENST00000523328 CD81P60033 236 aa17.2■□□□□ 0.34
PVT1-218ENST00000523328 TATDN3Q17R31 274 aa17.2■□□□□ 0.34
PVT1-218ENST00000523328 BVESQ8NE79 360 aa17.2■□□□□ 0.34
PVT1-218ENST00000523328 OR2K2Q8NGT1 345 aa17.2■□□□□ 0.34
PVT1-218ENST00000523328 TMEM68Q96MH6 324 aa17.2■□□□□ 0.34
PVT1-218ENST00000523328 FRAS1Q86XX4 4008 aa17.2■□□□□ 0.34
PVT1-218ENST00000523328 RBMY1BA6NDE4 496 aaKnown RBP17.19■□□□□ 0.34
PVT1-218ENST00000523328 RBMY1EA6NEQ0 496 aaKnown RBP17.19■□□□□ 0.34
PVT1-218ENST00000523328 CD1AP06126 327 aa17.19■□□□□ 0.34
PVT1-218ENST00000523328 RBMY1DP0C7P1 496 aaKnown RBP17.19■□□□□ 0.34
PVT1-218ENST00000523328 CELP19835 753 aa17.19■□□□□ 0.34
PVT1-218ENST00000523328 HLA-DRB3P79483 266 aa17.19■□□□□ 0.34
PVT1-218ENST00000523328 UNC119Q13432 240 aa17.19■□□□□ 0.34
PVT1-218ENST00000523328 MED21Q13503 144 aa17.19■□□□□ 0.34
PVT1-218ENST00000523328 RPEL1Q2QD12 228 aa17.19■□□□□ 0.34
PVT1-218ENST00000523328 ZNF555Q8NEP9 628 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 183.6 ms