RNA–Protein interactions for RNA: ENST00000522746.5

FAM49B-223, Transcript of family with sequence similarity 49 member B, human

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-223	ENST00000522746	ZNF788	Q6ZQV5	615 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	SPAG16	Q8N0X2	631 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	HSD17B11	Q8NBQ5	300 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	LINC01560	Q8TB33	94 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	SH3BGRL3	Q9H299	93 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	ZNF665	Q9H7R5	613 aa		13.81	□□□□□ -0.2
FAM49B-223	ENST00000522746	PROP1	O75360	226 aa		13.8	□□□□□ -0.2
FAM49B-223	ENST00000522746	KRAS	P01116	189 aa		13.8	□□□□□ -0.2
FAM49B-223	ENST00000522746	ZNF134	P52741	427 aa		13.8	□□□□□ -0.2
FAM49B-223	ENST00000522746	TCF23	Q7RTU1	214 aa		13.8	□□□□□ -0.2
FAM49B-223	ENST00000522746	TMEM217	Q8N7C4	229 aa		13.8	□□□□□ -0.2
FAM49B-223	ENST00000522746	BPIFC	Q8NFQ6	507 aa		13.8	□□□□□ -0.2
FAM49B-223	ENST00000522746	EDARADD	Q8WWZ3	215 aa		13.8	□□□□□ -0.2
FAM49B-223	ENST00000522746	HRH4	Q9H3N8	390 aa		13.8	□□□□□ -0.2
FAM49B-223	ENST00000522746	TANC2	Q9HCD6	1990 aa		13.79	□□□□□ -0.2
FAM49B-223	ENST00000522746	SIGLEC5	O15389	551 aa		13.79	□□□□□ -0.2
FAM49B-223	ENST00000522746	YPEL1	O60688	119 aa		13.79	□□□□□ -0.2
FAM49B-223	ENST00000522746	MUC1	P15941	1255 aa	Predicted RBP	13.79	□□□□□ -0.2
FAM49B-223	ENST00000522746	DYNLT3	P51808	116 aa		13.79	□□□□□ -0.2
FAM49B-223	ENST00000522746	OR5C1	Q8NGR4	320 aa		13.79	□□□□□ -0.2
FAM49B-223	ENST00000522746	LEAP2	Q969E1	77 aa		13.79	□□□□□ -0.2
FAM49B-223	ENST00000522746	SAT2	Q96F10	170 aa	Predicted RBP	13.79	□□□□□ -0.2
FAM49B-223	ENST00000522746	YPEL2	Q96QA6	119 aa		13.79	□□□□□ -0.2
FAM49B-223	ENST00000522746	SAP30L	Q9HAJ7	183 aa		13.79	□□□□□ -0.2
FAM49B-223	ENST00000522746	MMP24	Q9Y5R2	645 aa		13.79	□□□□□ -0.2
FAM49B-223	ENST00000522746	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.79	□□□□□ -0.2
FAM49B-223	ENST00000522746	SPP1	P10451	314 aa		13.79	□□□□□ -0.2
FAM49B-223	ENST00000522746	IAPP	P10997	89 aa		13.79	□□□□□ -0.2
FAM49B-223	ENST00000522746	GPR12	P47775	334 aa		13.79	□□□□□ -0.2
FAM49B-223	ENST00000522746	AKR1C1	Q04828	323 aa		13.79	□□□□□ -0.2
FAM49B-223	ENST00000522746	ZNF66	Q6ZN08	573 aa		13.79	□□□□□ -0.2
FAM49B-223	ENST00000522746	NCOR1P1	Q9H4R4	102 aa		13.79	□□□□□ -0.2
FAM49B-223	ENST00000522746	PKDREJ	Q9NTG1	2253 aa		13.78	□□□□□ -0.2
FAM49B-223	ENST00000522746	RAB19	A4D1S5	217 aa		13.78	□□□□□ -0.2
FAM49B-223	ENST00000522746	LRRC30	A6NM36	301 aa		13.78	□□□□□ -0.2
FAM49B-223	ENST00000522746	SLC31A2	O15432	143 aa		13.78	□□□□□ -0.2
FAM49B-223	ENST00000522746	SYNGR2	O43760	224 aa		13.78	□□□□□ -0.2
FAM49B-223	ENST00000522746	CLDN14	O95500	239 aa		13.78	□□□□□ -0.2
FAM49B-223	ENST00000522746	PLAU	P00749	431 aa		13.78	□□□□□ -0.2
FAM49B-223	ENST00000522746	SEC11B	P0C7V7	166 aa		13.78	□□□□□ -0.2
FAM49B-223	ENST00000522746	CHRNB4	P30926	498 aa		13.78	□□□□□ -0.2
FAM49B-223	ENST00000522746	SRSF3	P84103	164 aa	Known RBP	13.78	□□□□□ -0.2
FAM49B-223	ENST00000522746	RNASE6	Q93091	150 aa	Known RBP	13.78	□□□□□ -0.2
FAM49B-223	ENST00000522746	HSD17B10	Q99714	261 aa	Known RBP	13.78	□□□□□ -0.2
FAM49B-223	ENST00000522746	RFNG	Q9Y644	331 aa		13.78	□□□□□ -0.2
FAM49B-223	ENST00000522746	VSTM5	A8MXK1	200 aa		13.78	□□□□□ -0.2
FAM49B-223	ENST00000522746		P0C879	139 aa		13.78	□□□□□ -0.2
FAM49B-223	ENST00000522746	TMEM267	Q0VDI3	215 aa	Predicted RBP	13.78	□□□□□ -0.2
FAM49B-223	ENST00000522746	RPL39P5	Q59GN2	51 aa		13.78	□□□□□ -0.2
FAM49B-223	ENST00000522746	FAM209A	Q5JX71	171 aa		13.78	□□□□□ -0.2
FAM49B-223	ENST00000522746	NCR3LG1	Q68D85	454 aa		13.78	□□□□□ -0.2
FAM49B-223	ENST00000522746		Q6ZRG5	221 aa		13.78	□□□□□ -0.2
FAM49B-223	ENST00000522746	RAB40C	Q96S21	281 aa		13.78	□□□□□ -0.2
FAM49B-223	ENST00000522746	FAM234A	Q9H0X4	552 aa		13.78	□□□□□ -0.2
FAM49B-223	ENST00000522746	IFI27L2	Q9H2X8	130 aa		13.78	□□□□□ -0.2
FAM49B-223	ENST00000522746	KCNJ16	Q9NPI9	418 aa		13.78	□□□□□ -0.2
FAM49B-223	ENST00000522746	MMP26	Q9NRE1	261 aa		13.78	□□□□□ -0.2
FAM49B-223	ENST00000522746	ACACB	O00763	2458 aa		13.77	□□□□□ -0.2
FAM49B-223	ENST00000522746	TRGV10	A0A0A0MS01	117 aa		13.77	□□□□□ -0.21
FAM49B-223	ENST00000522746	KBTBD11-OT1	A0A1B0GTJ5	212 aa		13.77	□□□□□ -0.21
FAM49B-223	ENST00000522746	TMPRSS2	O15393	492 aa		13.77	□□□□□ -0.21
FAM49B-223	ENST00000522746	TXNL1	O43396	289 aa		13.77	□□□□□ -0.21
FAM49B-223	ENST00000522746	CRYZL1	O95825	349 aa		13.77	□□□□□ -0.21
FAM49B-223	ENST00000522746	RPL23A	P62750	156 aa	Known RBP	13.77	□□□□□ -0.21
FAM49B-223	ENST00000522746	BAX	Q07812	192 aa		13.77	□□□□□ -0.21
FAM49B-223	ENST00000522746	SWI5	Q1ZZU3	235 aa		13.77	□□□□□ -0.21
FAM49B-223	ENST00000522746	FAM122A	Q96E09	287 aa		13.77	□□□□□ -0.21
FAM49B-223	ENST00000522746	NARS2	Q96I59	477 aa	Known RBP	13.77	□□□□□ -0.21
FAM49B-223	ENST00000522746	EGLN1	Q9GZT9	426 aa		13.77	□□□□□ -0.21
FAM49B-223	ENST00000522746	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.77	□□□□□ -0.21
FAM49B-223	ENST00000522746	CLN8	Q9UBY8	286 aa		13.77	□□□□□ -0.21
FAM49B-223	ENST00000522746		A0A1W2PPE3	182 aa		13.76	□□□□□ -0.21
FAM49B-223	ENST00000522746	CD3E	P07766	207 aa		13.76	□□□□□ -0.21
FAM49B-223	ENST00000522746	DUT	P33316	252 aa	Known RBP	13.76	□□□□□ -0.21
FAM49B-223	ENST00000522746	FBXL19-AS1	Q494R0	122 aa		13.76	□□□□□ -0.21
FAM49B-223	ENST00000522746	CCL17	Q92583	94 aa		13.76	□□□□□ -0.21
FAM49B-223	ENST00000522746	MS4A7	Q9GZW8	240 aa	Predicted RBP	13.76	□□□□□ -0.21
FAM49B-223	ENST00000522746	DYNLRB1	Q9NP97	96 aa		13.76	□□□□□ -0.21
FAM49B-223	ENST00000522746	WSB1	Q9Y6I7	421 aa		13.76	□□□□□ -0.21
FAM49B-223	ENST00000522746	TMEM178B	H3BS89	294 aa		13.76	□□□□□ -0.21
FAM49B-223	ENST00000522746	TOR1A	O14656	332 aa		13.76	□□□□□ -0.21
FAM49B-223	ENST00000522746	C1QL1	O75973	258 aa		13.76	□□□□□ -0.21
FAM49B-223	ENST00000522746	BLOC1S1	P78537	153 aa		13.76	□□□□□ -0.21
FAM49B-223	ENST00000522746	ZNF266	Q14584	549 aa		13.76	□□□□□ -0.21
FAM49B-223	ENST00000522746	UQCC3	Q6UW78	93 aa		13.76	□□□□□ -0.21
FAM49B-223	ENST00000522746	BTNL8	Q6UX41	500 aa		13.76	□□□□□ -0.21
FAM49B-223	ENST00000522746	TCTEX1D1	Q8N7M0	179 aa		13.76	□□□□□ -0.21
FAM49B-223	ENST00000522746	GFOD1	Q9NXC2	390 aa		13.76	□□□□□ -0.21
FAM49B-223	ENST00000522746	COA4	Q9NYJ1	87 aa		13.76	□□□□□ -0.21
FAM49B-223	ENST00000522746	PSENEN	Q9NZ42	101 aa		13.76	□□□□□ -0.21
FAM49B-223	ENST00000522746	NUP50	Q9UKX7	468 aa		13.76	□□□□□ -0.21
FAM49B-223	ENST00000522746		M0R1X1	148 aa		13.75	□□□□□ -0.21
FAM49B-223	ENST00000522746	DANCR	P0C864	163 aa		13.75	□□□□□ -0.21
FAM49B-223	ENST00000522746	NDUFB7	P17568	137 aa		13.75	□□□□□ -0.21
FAM49B-223	ENST00000522746	FHIT	P49789	147 aa		13.75	□□□□□ -0.21
FAM49B-223	ENST00000522746	PJVK	Q0ZLH3	352 aa		13.75	□□□□□ -0.21
FAM49B-223	ENST00000522746	MIDN	Q504T8	468 aa		13.75	□□□□□ -0.21
FAM49B-223	ENST00000522746	C1orf229	Q6ZS94	237 aa	Predicted RBP	13.75	□□□□□ -0.21
FAM49B-223	ENST00000522746	TMEM231	Q9H6L2	316 aa		13.75	□□□□□ -0.21
FAM49B-223	ENST00000522746	PARP11	Q9NR21	331 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms