RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 IGKV1-16P04430 117 aa11.64□□□□□ -0.55
TRAPPC9-213ENST00000522504 GSTP1P09211 210 aaKnown RBP11.64□□□□□ -0.55
TRAPPC9-213ENST00000522504 MYL12AP19105 171 aa11.64□□□□□ -0.55
TRAPPC9-213ENST00000522504 HTR2CP28335 458 aa11.64□□□□□ -0.55
TRAPPC9-213ENST00000522504 DEFA5Q01523 94 aa11.64□□□□□ -0.55
TRAPPC9-213ENST00000522504 KLF5Q13887 457 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC9-213ENST00000522504 INSL4Q14641 139 aa11.64□□□□□ -0.55
TRAPPC9-213ENST00000522504 ZNF880Q6PDB4 577 aa11.64□□□□□ -0.55
TRAPPC9-213ENST00000522504 KCNK15Q9H427 330 aa11.64□□□□□ -0.55
TRAPPC9-213ENST00000522504 SLA2Q9H6Q3 261 aa11.64□□□□□ -0.55
TRAPPC9-213ENST00000522504 PIPOXQ9P0Z9 390 aa11.64□□□□□ -0.55
TRAPPC9-213ENST00000522504 OR1A1Q9P1Q5 309 aa11.64□□□□□ -0.55
TRAPPC9-213ENST00000522504 STEAP1Q9UHE8 339 aa11.64□□□□□ -0.55
TRAPPC9-213ENST00000522504 RNF150Q9ULK6 438 aa11.64□□□□□ -0.55
TRAPPC9-213ENST00000522504 WASHC3Q9Y3C0 194 aa11.64□□□□□ -0.55
TRAPPC9-213ENST00000522504 IZUMO1RA6ND01 250 aa11.63□□□□□ -0.55
TRAPPC9-213ENST00000522504 TFAP2AP05549 437 aa11.63□□□□□ -0.55
TRAPPC9-213ENST00000522504 MC5RP33032 325 aa11.63□□□□□ -0.55
TRAPPC9-213ENST00000522504 OGFRL1Q5TC84 451 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-213ENST00000522504 OR5T1Q8NG75 326 aa11.63□□□□□ -0.55
TRAPPC9-213ENST00000522504 GRPEL2Q8TAA5 225 aa11.63□□□□□ -0.55
TRAPPC9-213ENST00000522504 TMEM80Q96HE8 168 aa11.63□□□□□ -0.55
TRAPPC9-213ENST00000522504 UQCC2Q9BRT2 126 aa11.63□□□□□ -0.55
TRAPPC9-213ENST00000522504 NICN1Q9BSH3 213 aa11.63□□□□□ -0.55
TRAPPC9-213ENST00000522504 C11orf54Q9H0W9 315 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-213ENST00000522504 RANGRFQ9HD47 186 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-213ENST00000522504 ABRACLQ9P1F3 81 aa11.63□□□□□ -0.55
TRAPPC9-213ENST00000522504 LRRC42Q9Y546 428 aa11.63□□□□□ -0.55
TRAPPC9-213ENST00000522504 A0A0A6YYD4 124 aa11.62□□□□□ -0.55
TRAPPC9-213ENST00000522504 RBBP9O75884 186 aa11.62□□□□□ -0.55
TRAPPC9-213ENST00000522504 TRBV12-3P01733 135 aa11.62□□□□□ -0.55
TRAPPC9-213ENST00000522504 SYNJ2BPP57105 145 aa11.62□□□□□ -0.55
TRAPPC9-213ENST00000522504 RPS27AP62979 156 aaKnown RBP11.62□□□□□ -0.55
TRAPPC9-213ENST00000522504 PJVKQ0ZLH3 352 aa11.62□□□□□ -0.55
TRAPPC9-213ENST00000522504 NKAIN3Q8N8D7 197 aa11.62□□□□□ -0.55
TRAPPC9-213ENST00000522504 ZNF383Q8NA42 475 aa11.62□□□□□ -0.55
TRAPPC9-213ENST00000522504 POC5Q8NA72 575 aa11.62□□□□□ -0.55
TRAPPC9-213ENST00000522504 OR9G4Q8NGQ1 327 aa11.62□□□□□ -0.55
TRAPPC9-213ENST00000522504 NRG4Q8WWG1 115 aa11.62□□□□□ -0.55
TRAPPC9-213ENST00000522504 GGHQ92820 318 aa11.62□□□□□ -0.55
TRAPPC9-213ENST00000522504 NEDD4LQ96PU5 975 aa11.62□□□□□ -0.55
TRAPPC9-213ENST00000522504 RNF5Q99942 180 aa11.62□□□□□ -0.55
TRAPPC9-213ENST00000522504 HDHD3Q9BSH5 251 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC9-213ENST00000522504 ZNF355PQ9NSJ1 428 aa11.62□□□□□ -0.55
TRAPPC9-213ENST00000522504 RBMXL2O75526 392 aaKnown RBP11.61□□□□□ -0.55
TRAPPC9-213ENST00000522504 CELP19835 753 aa11.61□□□□□ -0.55
TRAPPC9-213ENST00000522504 ZP3P21754 424 aa11.61□□□□□ -0.55
TRAPPC9-213ENST00000522504 UNC119Q13432 240 aa11.61□□□□□ -0.55
TRAPPC9-213ENST00000522504 FXYD3Q14802 87 aa11.61□□□□□ -0.55
TRAPPC9-213ENST00000522504 SETD6Q8TBK2 473 aa11.61□□□□□ -0.55
TRAPPC9-213ENST00000522504 FAM110AQ9BQ89 295 aa11.61□□□□□ -0.55
TRAPPC9-213ENST00000522504 TMED9Q9BVK6 235 aa11.61□□□□□ -0.55
TRAPPC9-213ENST00000522504 VCXQ9H320 206 aa11.61□□□□□ -0.55
TRAPPC9-213ENST00000522504 HERC2O95714 4834 aa11.61□□□□□ -0.55
TRAPPC9-213ENST00000522504 C13orf42A0A1B0GVH6 325 aa11.6□□□□□ -0.55
TRAPPC9-213ENST00000522504 IRGMA1A4Y4 181 aa11.6□□□□□ -0.55
TRAPPC9-213ENST00000522504 ITGB1BP1O14713 200 aa11.6□□□□□ -0.55
TRAPPC9-213ENST00000522504 SLC22A1O15245 554 aa11.6□□□□□ -0.55
TRAPPC9-213ENST00000522504 SLC25A17O43808 307 aa11.6□□□□□ -0.55
TRAPPC9-213ENST00000522504 CSN3P07498 182 aa11.6□□□□□ -0.55
TRAPPC9-213ENST00000522504 CPEP16870 476 aa11.6□□□□□ -0.55
TRAPPC9-213ENST00000522504 CD40LGP29965 261 aa11.6□□□□□ -0.55
TRAPPC9-213ENST00000522504 CEACAM6P40199 344 aa11.6□□□□□ -0.55
TRAPPC9-213ENST00000522504 QRFPP83859 136 aa11.6□□□□□ -0.55
TRAPPC9-213ENST00000522504 ST3GAL4Q11206 333 aa11.6□□□□□ -0.55
TRAPPC9-213ENST00000522504 LINC00322Q6ZN03 302 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC9-213ENST00000522504 LRRTM1Q86UE6 522 aa11.6□□□□□ -0.55
TRAPPC9-213ENST00000522504 PACRGLQ8N7B6 248 aa11.6□□□□□ -0.55
TRAPPC9-213ENST00000522504 ZNF555Q8NEP9 628 aa11.6□□□□□ -0.55
TRAPPC9-213ENST00000522504 VCX3BQ9H321 246 aa11.6□□□□□ -0.55
TRAPPC9-213ENST00000522504 CHMP1AQ9HD42 196 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC9-213ENST00000522504 C8orf4Q9NR00 106 aa11.6□□□□□ -0.55
TRAPPC9-213ENST00000522504 SMPD3Q9NY59 655 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC9-213ENST00000522504 GHRLQ9UBU3 117 aa11.6□□□□□ -0.55
TRAPPC9-213ENST00000522504 DNAH10Q8IVF4 4471 aa11.59□□□□□ -0.55
TRAPPC9-213ENST00000522504 H0Y980 276 aa11.59□□□□□ -0.55
TRAPPC9-213ENST00000522504 IGLV2-23P01705 113 aa11.59□□□□□ -0.55
TRAPPC9-213ENST00000522504 RPS16P62249 146 aaKnown RBP11.59□□□□□ -0.55
TRAPPC9-213ENST00000522504 C1orf100Q5SVJ3 147 aa11.59□□□□□ -0.55
TRAPPC9-213ENST00000522504 LAIR2Q6ISS4 152 aa11.59□□□□□ -0.55
TRAPPC9-213ENST00000522504 TSNAXQ99598 290 aaKnown RBP11.59□□□□□ -0.55
TRAPPC9-213ENST00000522504 TM2D1Q9BX74 207 aa11.59□□□□□ -0.55
TRAPPC9-213ENST00000522504 TMEM59Q9BXS4 323 aa11.59□□□□□ -0.55
TRAPPC9-213ENST00000522504 HIPK2Q9H2X6 1198 aa11.59□□□□□ -0.55
TRAPPC9-213ENST00000522504 TUBA4BQ9H853 241 aa11.59□□□□□ -0.55
TRAPPC9-213ENST00000522504 KMT2AQ03164 3969 aa11.59□□□□□ -0.55
TRAPPC9-213ENST00000522504 IGKV1-6A0A0C4DH72 117 aa11.58□□□□□ -0.56
TRAPPC9-213ENST00000522504 H3BUA1 57 aa11.58□□□□□ -0.56
TRAPPC9-213ENST00000522504 SPDEFO95238 335 aa11.58□□□□□ -0.56
TRAPPC9-213ENST00000522504 IFNA6P05013 189 aa11.58□□□□□ -0.56
TRAPPC9-213ENST00000522504 CD1AP06126 327 aa11.58□□□□□ -0.56
TRAPPC9-213ENST00000522504 CRYGBP07316 175 aa11.58□□□□□ -0.56
TRAPPC9-213ENST00000522504 SCTP09683 121 aa11.58□□□□□ -0.56
TRAPPC9-213ENST00000522504 MECP2P51608 486 aaKnown RBP11.58□□□□□ -0.56
TRAPPC9-213ENST00000522504 TAS2R43P59537 309 aa11.58□□□□□ -0.56
TRAPPC9-213ENST00000522504 DYRK1AQ13627 763 aa11.58□□□□□ -0.56
TRAPPC9-213ENST00000522504 MRGPRG-AS1Q2M3A8 158 aa11.58□□□□□ -0.56
TRAPPC9-213ENST00000522504 ZNF343Q6P1L6 599 aa11.58□□□□□ -0.56
TRAPPC9-213ENST00000522504 PTX4Q96A99 478 aa11.58□□□□□ -0.56
TRAPPC9-213ENST00000522504 KRTAP17-1Q9BYP8 105 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms