RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 NPBWR2P48146 333 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 RPL23P62829 140 aaKnown RBP8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 PAFAH1B2P68402 229 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 FNDC7Q5VTL7 733 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 TUSC5Q8IXB3 177 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 CEP250Q9BV73 2442 aa8.66□□□□□ -1.02
PDGFRB-207ENST00000520579 B4DEV8 164 aa8.65□□□□□ -1.02
PDGFRB-207ENST00000520579 M0R135 149 aa8.65□□□□□ -1.02
PDGFRB-207ENST00000520579 MMP23AO75900 390 aa8.65□□□□□ -1.02
PDGFRB-207ENST00000520579 TOMM40O96008 361 aa8.65□□□□□ -1.02
PDGFRB-207ENST00000520579 HNRNPA2B1P22626 353 aaKnown RBP8.65□□□□□ -1.02
PDGFRB-207ENST00000520579 MPLP40238 635 aa8.65□□□□□ -1.02
PDGFRB-207ENST00000520579 ATP5J2P56134 94 aa8.65□□□□□ -1.02
PDGFRB-207ENST00000520579 TAS2R30P59541 319 aa8.65□□□□□ -1.02
PDGFRB-207ENST00000520579 ARL16Q0P5N6 197 aa8.65□□□□□ -1.02
PDGFRB-207ENST00000520579 ZNF818PQ6ZRF7 136 aa8.65□□□□□ -1.02
PDGFRB-207ENST00000520579 ZNF799Q96GE5 643 aa8.65□□□□□ -1.02
PDGFRB-207ENST00000520579 PSENENQ9NZ42 101 aa8.65□□□□□ -1.02
PDGFRB-207ENST00000520579 TNFSF14O43557 240 aa8.65□□□□□ -1.02
PDGFRB-207ENST00000520579 MAS1LP35410 378 aa8.65□□□□□ -1.02
PDGFRB-207ENST00000520579 PPOXP50336 477 aa8.65□□□□□ -1.02
PDGFRB-207ENST00000520579 TCTAP57738 103 aa8.65□□□□□ -1.02
PDGFRB-207ENST00000520579 ZNF726P1Q15940 193 aa8.65□□□□□ -1.02
PDGFRB-207ENST00000520579 C5orf30Q96GV9 206 aa8.65□□□□□ -1.02
PDGFRB-207ENST00000520579 ZNF488Q96MN9 340 aa8.65□□□□□ -1.02
PDGFRB-207ENST00000520579 SRSF8Q9BRL6 282 aaKnown RBP8.65□□□□□ -1.02
PDGFRB-207ENST00000520579 TUSC2O75896 110 aa8.65□□□□□ -1.03
PDGFRB-207ENST00000520579 IFNA1P01562 189 aa8.65□□□□□ -1.03
PDGFRB-207ENST00000520579 FRMD6-AS1P0C7T7 363 aa8.65□□□□□ -1.03
PDGFRB-207ENST00000520579 OTX1P32242 354 aaPredicted RBP8.65□□□□□ -1.03
PDGFRB-207ENST00000520579 SGMS2Q8NHU3 365 aa8.65□□□□□ -1.03
PDGFRB-207ENST00000520579 SPIN2AQ99865 258 aa8.65□□□□□ -1.03
PDGFRB-207ENST00000520579 SPIN2BQ9BPZ2 258 aa8.65□□□□□ -1.03
PDGFRB-207ENST00000520579 ZNF703Q9H7S9 590 aaPredicted RBP8.65□□□□□ -1.03
PDGFRB-207ENST00000520579 CUTCQ9NTM9 273 aa8.65□□□□□ -1.03
PDGFRB-207ENST00000520579 TMEM106BQ9NUM4 274 aa8.65□□□□□ -1.03
PDGFRB-207ENST00000520579 TMEM140Q9NV12 185 aa8.65□□□□□ -1.03
PDGFRB-207ENST00000520579 NAT8Q9UHE5 227 aa8.65□□□□□ -1.03
PDGFRB-207ENST00000520579 SLC17A3O00476 420 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 LILRA1O75019 489 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 PSG2P11465 335 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 PSMB3P49720 205 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 TPPP2P59282 170 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 LTC4SQ16873 150 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 FER1L6-AS1Q8NA97 138 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 PLPPR1Q8TBJ4 325 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 SPSB1Q96BD6 273 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 ACY3Q96HD9 319 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 PLCE1Q9P212 2302 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 CHD9Q3L8U1 2897 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 DIRC3C9JPN6 131 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 KLRC4-KLRK1H3BQV0 150 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 ESDP10768 282 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 IL3RAP26951 378 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 MDH2P40926 338 aaKnown RBP8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 ZFP36L1Q07352 338 aaKnown RBP8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 EIF3IQ13347 325 aaKnown RBP8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 VASH2Q86V25 355 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 OR4P4Q8NGL7 312 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 C18orf12Q96KH6 178 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 OR4C12Q96R67 309 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 CHRDL1Q9BU40 450 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 ANGPTL4Q9BY76 406 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 OR5B21A6NL26 309 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 PARM1Q6UWI2 310 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 FAM19A2Q8N3H0 131 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 OR1B1Q8NGR6 318 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 DDIT4LQ96D03 193 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 UCN2Q96RP3 112 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 CTDSP1Q9GZU7 261 aa8.64□□□□□ -1.03
PDGFRB-207ENST00000520579 SH2D1BO14796 132 aa8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 CLPSP04118 112 aa8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 GCSAMLQ5JQS6 135 aa8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 ZNF808Q8N4W9 903 aaPredicted RBP8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 PRR14LQ5THK1 2151 aa8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 CACNA1EQ15878 2313 aa8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 ALG1L2C9J202 215 aa8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 ZNF207O43670 478 aaKnown RBP8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 SERF1AO75920 110 aa8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 NDUFB4O95168 129 aa8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 HRASP01112 189 aa8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 CXCL10P02778 98 aa8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 ZNF90Q03938 601 aa8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 FFAR4Q5NUL3 377 aa8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 IGF2-ASQ6U949 168 aa8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 KLHDC1Q8N7A1 406 aa8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 FGF14Q92915 247 aa8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 HARBI1Q96MB7 349 aa8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 HS3ST6Q96QI5 342 aa8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 CDH20Q9HBT6 801 aa8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 SPAARA0A1B0GVQ0 90 aa8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 PFN1P07737 140 aaKnown RBP8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 ADMP35318 185 aa8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 IER3P46695 156 aa8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 PPP1CBP62140 327 aa8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 ACOT6Q3I5F7 207 aaPredicted RBP8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 GPR146Q96CH1 333 aa8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 KIAA1549Q9HCM3 1950 aa8.63□□□□□ -1.03
PDGFRB-207ENST00000520579 TRBV24-1A0A075B6N3 115 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms