RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.58□□□□□ -0.23
UBR5-207ENST00000520539 PSG2P11465 335 aa13.58□□□□□ -0.23
UBR5-207ENST00000520539 RAX2Q96IS3 184 aa13.58□□□□□ -0.23
UBR5-207ENST00000520539 DNAJC30Q96LL9 226 aa13.58□□□□□ -0.23
UBR5-207ENST00000520539 ALKBH3Q96Q83 286 aaPredicted RBP13.58□□□□□ -0.23
UBR5-207ENST00000520539 IDSB3KWA1 339 aa13.58□□□□□ -0.24
UBR5-207ENST00000520539 NPFFO15130 113 aa13.58□□□□□ -0.24
UBR5-207ENST00000520539 CXCL3P19876 107 aa13.58□□□□□ -0.24
UBR5-207ENST00000520539 RPS11P62280 158 aaKnown RBP eCLIP13.58□□□□□ -0.24
UBR5-207ENST00000520539 MRPS11P82912 194 aaKnown RBP13.58□□□□□ -0.24
UBR5-207ENST00000520539 DDB2Q92466 427 aa13.58□□□□□ -0.24
UBR5-207ENST00000520539 PXMP4Q9Y6I8 212 aa13.58□□□□□ -0.24
UBR5-207ENST00000520539 CEACAM16Q2WEN9 425 aa13.58□□□□□ -0.24
UBR5-207ENST00000520539 TEX37Q96LM6 180 aa13.58□□□□□ -0.24
UBR5-207ENST00000520539 INAFM2P0DMQ5 153 aa13.58□□□□□ -0.24
UBR5-207ENST00000520539 OR3A4PP47883 348 aa13.58□□□□□ -0.24
UBR5-207ENST00000520539 SMAD4Q13485 552 aaKnown RBP13.58□□□□□ -0.24
UBR5-207ENST00000520539 TMEM25Q86YD3 366 aa13.58□□□□□ -0.24
UBR5-207ENST00000520539 WDR38Q5JTN6 314 aa13.58□□□□□ -0.24
UBR5-207ENST00000520539 VAX1Q5SQQ9 334 aa13.58□□□□□ -0.24
UBR5-207ENST00000520539 OR2H1Q9GZK4 316 aa13.58□□□□□ -0.24
UBR5-207ENST00000520539 LINC00587B1AMM8 73 aa13.58□□□□□ -0.24
UBR5-207ENST00000520539 DPTQ07507 201 aa13.58□□□□□ -0.24
UBR5-207ENST00000520539 SPEM2Q0P670 501 aa13.58□□□□□ -0.24
UBR5-207ENST00000520539 GUCA2BQ16661 112 aa13.58□□□□□ -0.24
UBR5-207ENST00000520539 TMEM108Q6UXF1 575 aa13.58□□□□□ -0.24
UBR5-207ENST00000520539 HIST1H2BAQ96A08 127 aa13.58□□□□□ -0.24
UBR5-207ENST00000520539 SMPXQ9UHP9 88 aa13.58□□□□□ -0.24
UBR5-207ENST00000520539 EML5Q05BV3 1969 aa13.58□□□□□ -0.24
UBR5-207ENST00000520539 C1SP09871 688 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 CLDN2P57739 230 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 ZNF56Q15929 161 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 TMEM222Q9H0R3 208 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 GDF9O60383 454 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 SBK3P0C264 359 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 PCMT1P22061 227 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 GPX4P36969 197 aaPredicted RBP13.57□□□□□ -0.24
UBR5-207ENST00000520539 CAPZBP47756 277 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 FMC1Q96HJ9 113 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 C4orf45Q96LM5 186 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 HCFC1P51610 2035 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 DANCRP0C864 163 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 CCSMST1Q4G0I0 132 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 C16orf52Q8NHV5 167 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 USP54Q70EL1 1684 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 DHHO43323 396 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 ARL14EPLP0DKL9 152 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 CFAP161Q6P656 301 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 MUC4Q99102 2169 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 GAPTQ8N292 157 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 PGLYRP4Q96LB8 373 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 H3BUT2 72 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 ZNF688P0C7X2 276 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 DUTP33316 252 aaKnown RBP13.57□□□□□ -0.24
UBR5-207ENST00000520539 TMEM30BQ3MIR4 351 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 BAHD1Q8TBE0 780 aaPredicted RBP13.57□□□□□ -0.24
UBR5-207ENST00000520539 LTB4R2Q9NPC1 389 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 A0A1W2PRS3 328 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 HOXD9P28356 352 aaPredicted RBP13.57□□□□□ -0.24
UBR5-207ENST00000520539 MBNL2Q5VZF2 373 aaKnown RBP13.57□□□□□ -0.24
UBR5-207ENST00000520539 GREB1Q4ZG55 1949 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 NEU1Q99519 415 aa13.57□□□□□ -0.24
UBR5-207ENST00000520539 K7N7A8 449 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 ASAH2BP0C7U1 165 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 NXPH1P58417 271 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 MRGPRFQ96AM1 343 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 KLF16Q9BXK1 252 aaPredicted RBP13.56□□□□□ -0.24
UBR5-207ENST00000520539 PRRC2AP48634 2157 aaKnown RBP13.56□□□□□ -0.24
UBR5-207ENST00000520539 CA6P23280 308 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 OR11H7Q8NGC8 314 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 MRAPQ8TCY5 172 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 KLF12Q9Y4X4 402 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 CHST5Q9GZS9 411 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 SLC6A13Q9NSD5 602 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 CRYBG1Q9Y4K1 1723 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 CEACAM18A8MTB9 384 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 DEFB108AA8MXU0 73 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 FAM157AC9JC47 383 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 TNFRSF6BO95407 300 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 TRBV20OR9-2A0A075B6H5 130 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 ERV3-1Q14264 604 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 DEFB108BQ8NET1 73 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 RBM38Q9H0Z9 239 aaKnown RBP13.56□□□□□ -0.24
UBR5-207ENST00000520539 J3QR06 171 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 PLAUP00749 431 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 RLN3Q8WXF3 142 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 SIGLEC7Q9Y286 467 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 MED19A0JLT2 244 aaPredicted RBP13.56□□□□□ -0.24
UBR5-207ENST00000520539 ZNF146Q15072 292 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 LINC00696Q6ZRV3 163 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 ORMDL3Q8N138 153 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 CHODLQ9H9P2 273 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 SERGEFQ9UGK8 458 aa13.56□□□□□ -0.24
UBR5-207ENST00000520539 CXCL12P48061 93 aa13.55□□□□□ -0.24
UBR5-207ENST00000520539 TRAV9-2A0A087WT02 112 aa13.55□□□□□ -0.24
UBR5-207ENST00000520539 C9orf153Q5TBE3 101 aa13.55□□□□□ -0.24
UBR5-207ENST00000520539 FSCN3Q9NQT6 498 aa13.55□□□□□ -0.24
UBR5-207ENST00000520539 QSER1Q2KHR3 1735 aa13.55□□□□□ -0.24
UBR5-207ENST00000520539 VWC2LB2RUY7 222 aa13.55□□□□□ -0.24
UBR5-207ENST00000520539 CTSVO60911 334 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms